RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 C19orf44Q9H6X5 657 aa14.91□□□□□ -0.02
IRF1-208ENST00000472045 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
IRF1-208ENST00000472045 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
IRF1-208ENST00000472045 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
IRF1-208ENST00000472045 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
IRF1-208ENST00000472045 CNTROBQ8N137 903 aa14.9□□□□□ -0.02
IRF1-208ENST00000472045 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
IRF1-208ENST00000472045 CT47B1P0C2W7 299 aaPredicted RBP14.9□□□□□ -0.02
IRF1-208ENST00000472045 MCM10Q7L590 875 aa14.9□□□□□ -0.02
IRF1-208ENST00000472045 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
IRF1-208ENST00000472045 IKQ13123 557 aaPredicted RBP14.89□□□□□ -0.03
IRF1-208ENST00000472045 PBRM1Q86U86 1689 aa14.89□□□□□ -0.03
IRF1-208ENST00000472045 ANKRD24Q8TF21 1146 aa14.89□□□□□ -0.03
IRF1-208ENST00000472045 TTC21BQ7Z4L5 1316 aa14.89□□□□□ -0.03
IRF1-208ENST00000472045 CREBRFQ8IUR6 639 aa14.89□□□□□ -0.03
IRF1-208ENST00000472045 SIL1Q9H173 461 aa14.89□□□□□ -0.03
IRF1-208ENST00000472045 ATP10AO60312 1499 aa14.88□□□□□ -0.03
IRF1-208ENST00000472045 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
IRF1-208ENST00000472045 IGHMBP2P38935 993 aaKnown RBP14.88□□□□□ -0.03
IRF1-208ENST00000472045 TAF7Q15545 349 aaPredicted RBP14.88□□□□□ -0.03
IRF1-208ENST00000472045 MIS18AQ9NYP9 233 aa14.88□□□□□ -0.03
IRF1-208ENST00000472045 RBM19Q9Y4C8 960 aaKnown RBP14.88□□□□□ -0.03
IRF1-208ENST00000472045 ATP6V1DQ9Y5K8 247 aa14.88□□□□□ -0.03
IRF1-208ENST00000472045 RBM5P52756 815 aaKnown RBP eCLIP14.88□□□□□ -0.03
IRF1-208ENST00000472045 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
IRF1-208ENST00000472045 IFNL2Q8IZJ0 200 aa14.87□□□□□ -0.03
IRF1-208ENST00000472045 C1orf115Q9H7X2 142 aa14.87□□□□□ -0.03
IRF1-208ENST00000472045 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
IRF1-208ENST00000472045 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.87□□□□□ -0.03
IRF1-208ENST00000472045 MTMR7Q9Y216 660 aa14.87□□□□□ -0.03
IRF1-208ENST00000472045 TTC21AQ8NDW8 1320 aa14.86□□□□□ -0.03
IRF1-208ENST00000472045 L1TD1Q5T7N2 865 aaKnown RBP14.86□□□□□ -0.03
IRF1-208ENST00000472045 RPRD2Q5VT52 1461 aaKnown RBP14.86□□□□□ -0.03
IRF1-208ENST00000472045 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
IRF1-208ENST00000472045 AK7Q96M32 723 aa14.86□□□□□ -0.03
IRF1-208ENST00000472045 DISP1Q96F81 1524 aa14.85□□□□□ -0.03
IRF1-208ENST00000472045 DUSP27Q5VZP5 1158 aa14.85□□□□□ -0.03
IRF1-208ENST00000472045 THUMPD2Q9BTF0 503 aaKnown RBP14.85□□□□□ -0.03
IRF1-208ENST00000472045 SART3Q15020 963 aaKnown RBP14.85□□□□□ -0.03
IRF1-208ENST00000472045 CCDC43Q96MW1 224 aaKnown RBP14.85□□□□□ -0.03
IRF1-208ENST00000472045 CEP126Q9P2H0 1117 aa14.85□□□□□ -0.03
IRF1-208ENST00000472045 NSD2O96028 1365 aa14.85□□□□□ -0.03
IRF1-208ENST00000472045 DCTN1Q14203 1278 aa14.84□□□□□ -0.03
IRF1-208ENST00000472045 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
IRF1-208ENST00000472045 CCDC85AQ96PX6 553 aaPredicted RBP14.84□□□□□ -0.03
IRF1-208ENST00000472045 HIP1O00291 1037 aa14.84□□□□□ -0.03
IRF1-208ENST00000472045 LRRC59Q96AG4 307 aaKnown RBP14.84□□□□□ -0.03
IRF1-208ENST00000472045 GZF1Q9H116 711 aaPredicted RBP14.84□□□□□ -0.03
IRF1-208ENST00000472045 PDE4AP27815 886 aa14.84□□□□□ -0.03
IRF1-208ENST00000472045 CDC45O75419 566 aa14.83□□□□□ -0.04
IRF1-208ENST00000472045 SAFBQ15424 915 aaKnown RBP eCLIP14.83□□□□□ -0.04
IRF1-208ENST00000472045 KCNA6P17658 529 aa14.83□□□□□ -0.04
IRF1-208ENST00000472045 HSP90AB3PQ58FF7 597 aa14.83□□□□□ -0.04
IRF1-208ENST00000472045 ATF7IPQ6VMQ6 1270 aa14.83□□□□□ -0.04
IRF1-208ENST00000472045 LARP1Q6PKG0 1096 aaKnown RBP14.82□□□□□ -0.04
IRF1-208ENST00000472045 PDE3AQ14432 1141 aa14.82□□□□□ -0.04
IRF1-208ENST00000472045 TEX13AQ9BXU3 409 aaPredicted RBP14.82□□□□□ -0.04
IRF1-208ENST00000472045 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
IRF1-208ENST00000472045 SRGAP3O43295 1099 aa14.82□□□□□ -0.04
IRF1-208ENST00000472045 PPIP5K1Q6PFW1 1433 aa14.82□□□□□ -0.04
IRF1-208ENST00000472045 BCAR3O75815 825 aa14.81□□□□□ -0.04
IRF1-208ENST00000472045 IFT57Q9NWB7 429 aa14.81□□□□□ -0.04
IRF1-208ENST00000472045 TPD52L1Q16890 204 aaPredicted RBP14.81□□□□□ -0.04
IRF1-208ENST00000472045 GCC1Q96CN9 775 aa14.81□□□□□ -0.04
IRF1-208ENST00000472045 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
IRF1-208ENST00000472045 FOXD4L6Q3SYB3 417 aaPredicted RBP14.81□□□□□ -0.04
IRF1-208ENST00000472045 FOXD4L3Q6VB84 417 aaPredicted RBP14.81□□□□□ -0.04
IRF1-208ENST00000472045 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
IRF1-208ENST00000472045 LRRCC1Q9C099 1032 aa14.8□□□□□ -0.04
IRF1-208ENST00000472045 PSMA5P28066 241 aa14.8□□□□□ -0.04
IRF1-208ENST00000472045 RRP12Q5JTH9 1297 aaKnown RBP14.8□□□□□ -0.04
IRF1-208ENST00000472045 PES1O00541 588 aaKnown RBP14.8□□□□□ -0.04
IRF1-208ENST00000472045 ZSCAN25Q6NSZ9 544 aa14.8□□□□□ -0.04
IRF1-208ENST00000472045 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
IRF1-208ENST00000472045 CABLES1Q8TDN4 633 aa14.8□□□□□ -0.04
IRF1-208ENST00000472045 CCDC47Q96A33 483 aaKnown RBP14.8□□□□□ -0.04
IRF1-208ENST00000472045 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 MYD88Q99836 296 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 ANO8Q9HCE9 1232 aaPredicted RBP14.79□□□□□ -0.04
IRF1-208ENST00000472045 PHF14O94880 888 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 SLC4A3P48751 1232 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 DDB1Q16531 1140 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 RPGRQ92834 1020 aaKnown RBP14.79□□□□□ -0.04
IRF1-208ENST00000472045 ANKRD36BQ8N2N9 1353 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 BRMS1Q9HCU9 246 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 TMOD2Q9NZR1 351 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 TRMT112Q9UI30 125 aaKnown RBP14.79□□□□□ -0.04
IRF1-208ENST00000472045 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 ZSCAN29Q8IWY8 852 aaPredicted RBP14.79□□□□□ -0.04
IRF1-208ENST00000472045 XBP1P17861 261 aa14.79□□□□□ -0.04
IRF1-208ENST00000472045 FKBP4Q02790 459 aaKnown RBP eCLIP14.78□□□□□ -0.04
IRF1-208ENST00000472045 SHANK2Q9UPX8 1470 aa14.78□□□□□ -0.04
IRF1-208ENST00000472045 PTPRKQ15262 1439 aa14.78□□□□□ -0.04
IRF1-208ENST00000472045 AACSQ86V21 672 aa14.78□□□□□ -0.04
IRF1-208ENST00000472045 RAI14Q9P0K7 980 aa14.78□□□□□ -0.04
IRF1-208ENST00000472045 SMC3Q9UQE7 1217 aa14.78□□□□□ -0.04
IRF1-208ENST00000472045 NEO1Q92859 1461 aa14.78□□□□□ -0.04
IRF1-208ENST00000472045 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
IRF1-208ENST00000472045 IPO9Q96P70 1041 aaKnown RBP14.78□□□□□ -0.04
IRF1-208ENST00000472045 RFC4P35249 363 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms