RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 C3P01024 1663 aa13.53□□□□□ -0.24
APLF-204ENST00000471727 TRIM27P14373 513 aa13.53□□□□□ -0.24
APLF-204ENST00000471727 DIP2AQ14689 1571 aa13.52□□□□□ -0.24
APLF-204ENST00000471727 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.24
APLF-204ENST00000471727 PTCH1Q13635 1447 aa13.52□□□□□ -0.24
APLF-204ENST00000471727 ZNF853P0CG23 659 aa13.52□□□□□ -0.25
APLF-204ENST00000471727 RTL5Q5HYW3 569 aaPredicted RBP13.52□□□□□ -0.25
APLF-204ENST00000471727 NOB1Q9ULX3 412 aaKnown RBP13.52□□□□□ -0.25
APLF-204ENST00000471727 ITSN1Q15811 1721 aa13.52□□□□□ -0.25
APLF-204ENST00000471727 MAP2P11137 1827 aaKnown RBP13.52□□□□□ -0.25
APLF-204ENST00000471727 ACEP12821 1306 aa13.51□□□□□ -0.25
APLF-204ENST00000471727 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 PDZRN3Q9UPQ7 1066 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 USP6P35125 1406 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 HMOX1P09601 288 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 AMOTL2Q9Y2J4 779 aa13.5□□□□□ -0.25
APLF-204ENST00000471727 OVOS2A0A0J9YW53 1432 aa13.49□□□□□ -0.25
APLF-204ENST00000471727 OVOS2Q6IE36 1432 aa13.49□□□□□ -0.25
APLF-204ENST00000471727 VAMP4O75379 141 aa13.49□□□□□ -0.25
APLF-204ENST00000471727 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
APLF-204ENST00000471727 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
APLF-204ENST00000471727 TOPAZ1Q8N9V7 1692 aa13.49□□□□□ -0.25
APLF-204ENST00000471727 FBLN1P23142 703 aa13.48□□□□□ -0.25
APLF-204ENST00000471727 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
APLF-204ENST00000471727 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
APLF-204ENST00000471727 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.48□□□□□ -0.25
APLF-204ENST00000471727 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
APLF-204ENST00000471727 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
APLF-204ENST00000471727 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
APLF-204ENST00000471727 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
APLF-204ENST00000471727 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
APLF-204ENST00000471727 SMC5Q8IY18 1101 aa13.46□□□□□ -0.25
APLF-204ENST00000471727 TMEM57Q8N5G2 664 aa13.46□□□□□ -0.25
APLF-204ENST00000471727 MRPL50Q8N5N7 158 aaKnown RBP13.46□□□□□ -0.25
APLF-204ENST00000471727 LAS1LQ9Y4W2 734 aaKnown RBP13.46□□□□□ -0.25
APLF-204ENST00000471727 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.25
APLF-204ENST00000471727 ANKARQ7Z5J8 1434 aa13.46□□□□□ -0.26
APLF-204ENST00000471727 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.26
APLF-204ENST00000471727 EIF4A2Q14240 407 aaKnown RBP13.46□□□□□ -0.26
APLF-204ENST00000471727 SLC26A8Q96RN1 970 aa13.46□□□□□ -0.26
APLF-204ENST00000471727 API5Q9BZZ5 524 aaKnown RBP13.46□□□□□ -0.26
APLF-204ENST00000471727 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
APLF-204ENST00000471727 BECN1Q14457 450 aa13.44□□□□□ -0.26
APLF-204ENST00000471727 NBR1Q14596 966 aa13.44□□□□□ -0.26
APLF-204ENST00000471727 TWISTNBQ3B726 338 aaPredicted RBP13.44□□□□□ -0.26
APLF-204ENST00000471727 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
APLF-204ENST00000471727 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
APLF-204ENST00000471727 NGDNQ8NEJ9 315 aaKnown RBP13.42□□□□□ -0.26
APLF-204ENST00000471727 GCC1Q96CN9 775 aa13.42□□□□□ -0.26
APLF-204ENST00000471727 VIRMAQ69YN4 1812 aaKnown RBP13.42□□□□□ -0.26
APLF-204ENST00000471727 KIAA0232Q92628 1395 aa13.42□□□□□ -0.26
APLF-204ENST00000471727 ZBTB7BO15156 539 aaPredicted RBP13.42□□□□□ -0.26
APLF-204ENST00000471727 SBNO1A3KN83 1393 aa13.42□□□□□ -0.26
APLF-204ENST00000471727 NALCNQ8IZF0 1738 aa13.41□□□□□ -0.26
APLF-204ENST00000471727 CHL1O00533 1208 aa13.41□□□□□ -0.26
APLF-204ENST00000471727 ABCC4O15439 1325 aa13.41□□□□□ -0.26
APLF-204ENST00000471727 USP19O94966 1318 aa13.41□□□□□ -0.26
APLF-204ENST00000471727 FLT4P35916 1363 aa13.41□□□□□ -0.26
APLF-204ENST00000471727 FER1L4A9Z1Z3 1794 aa13.41□□□□□ -0.26
APLF-204ENST00000471727 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
APLF-204ENST00000471727 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
APLF-204ENST00000471727 NUCB1Q02818 461 aa13.39□□□□□ -0.27
APLF-204ENST00000471727 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
APLF-204ENST00000471727 TSPYL6Q8N831 410 aa13.39□□□□□ -0.27
APLF-204ENST00000471727 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
APLF-204ENST00000471727 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
APLF-204ENST00000471727 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
APLF-204ENST00000471727 RIMS1Q86UR5 1692 aaKnown RBP13.38□□□□□ -0.27
APLF-204ENST00000471727 DEKP35659 375 aaKnown RBP13.38□□□□□ -0.27
APLF-204ENST00000471727 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
APLF-204ENST00000471727 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
APLF-204ENST00000471727 KDRP35968 1356 aa13.37□□□□□ -0.27
APLF-204ENST00000471727 PTPRCP08575 1304 aa13.37□□□□□ -0.27
APLF-204ENST00000471727 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
APLF-204ENST00000471727 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
APLF-204ENST00000471727 AMPHP49418 695 aa13.36□□□□□ -0.27
APLF-204ENST00000471727 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
APLF-204ENST00000471727 ANKLE2Q86XL3 938 aa13.36□□□□□ -0.27
APLF-204ENST00000471727 AEBP1Q8IUX7 1158 aa13.36□□□□□ -0.27
APLF-204ENST00000471727 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
APLF-204ENST00000471727 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
APLF-204ENST00000471727 SOS1Q07889 1333 aaPredicted RBP13.36□□□□□ -0.27
APLF-204ENST00000471727 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
APLF-204ENST00000471727 FAM83GA6ND36 823 aa13.35□□□□□ -0.27
APLF-204ENST00000471727 SEC24BO95487 1268 aa13.35□□□□□ -0.27
APLF-204ENST00000471727 INTS3Q68E01 1043 aaKnown RBP13.35□□□□□ -0.27
APLF-204ENST00000471727 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
APLF-204ENST00000471727 CEP170BQ9Y4F5 1589 aaPredicted RBP13.34□□□□□ -0.27
APLF-204ENST00000471727 DLG5Q8TDM6 1919 aa13.34□□□□□ -0.27
APLF-204ENST00000471727 ELL2O00472 640 aaPredicted RBP13.34□□□□□ -0.27
APLF-204ENST00000471727 KCNA6P17658 529 aa13.34□□□□□ -0.27
APLF-204ENST00000471727 NLRP6P59044 892 aa13.34□□□□□ -0.27
APLF-204ENST00000471727 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
APLF-204ENST00000471727 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
APLF-204ENST00000471727 CRB1P82279 1406 aa13.33□□□□□ -0.28
APLF-204ENST00000471727 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms