RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ABCF2Q9UG63 623 aa15.66■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 TDO2P48775 406 aa15.66■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.66■□□□□ 0.13e-6■■■■■ 35
NPHP3-ACAD11-201ENST00000471702 STIM1Q13586 685 aa15.66■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 NFKBIBQ15653 356 aa15.66■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 ZWINTO95229 277 aa15.65■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 ERCC4Q92889 916 aaPredicted RBP15.65■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 TRIM22Q8IYM9 498 aa15.65■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 TATP17735 454 aaPredicted RBP15.65■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 COMMD10Q9Y6G5 202 aa15.65■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 ANAPC15P60006 121 aa15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PRPF40AO75400 957 aaKnown RBP15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PPFIBP1Q86W92 1011 aa15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 LRP2BPQ9P2M1 347 aa15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 ECM2O94769 699 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 DHX8Q14562 1220 aaKnown RBP15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 NACAP1Q9BZK3 213 aa15.64■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 MTHFSP49914 203 aa15.63■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 WDHD1O75717 1129 aaPredicted RBP15.63■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 RAI14Q9P0K7 980 aa15.63■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 TXNDC2Q86VQ3 553 aa15.63■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 HDGFL1Q5TGJ6 251 aa15.62■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 VPS8Q8N3P4 1428 aa15.62■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 LIG1P18858 919 aa15.62■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 CEP63Q96MT8 703 aa15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 STAC3Q96MF2 364 aa15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 CCDC112Q8NEF3 446 aa15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 CDC45O75419 566 aa15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 ZNF396Q96N95 335 aaPredicted RBP15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 LUC7LQ9NQ29 371 aaKnown RBP15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PPM1EQ8WY54 764 aa15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 ZMYND15Q9H091 742 aa15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 LEKR1Q6ZMV7 388 aa15.61■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 STAMBPO95630 424 aa15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 GOLGA6L10A0A0M3HER8 536 aa15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 DHX57Q6P158 1386 aaKnown RBP15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 IDH1O75874 414 aaKnown RBP15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 CWC15Q9P013 229 aaKnown RBP15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 BMP2KQ9NSY1 1161 aaPredicted RBP15.6■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 UBAC1Q9BSL1 405 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 UBA5Q9GZZ9 404 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 CCDC113Q9H0I3 377 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 MACROD2A1Z1Q3 448 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 GNAI2P04899 355 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PDCP20941 246 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 INCENPQ9NQS7 918 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PRDM11Q9NQV5 511 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 TMOD2Q9NZR1 351 aa15.59■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 MIA2Q96PC5 1412 aa15.58■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 ANKIB1Q9P2G1 1089 aa15.58■□□□□ 0.09
NPHP3-ACAD11-201ENST00000471702 DNAI2Q9GZS0 605 aa15.58■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 PRKAR2BP31323 418 aa15.58■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 RBM10P98175 930 aaKnown RBP15.58■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 CRACR2BQ8N4Y2 399 aaPredicted RBP15.58■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 GNAI3P08754 354 aa15.58■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 MINDY4BA8MYZ0 360 aa15.58■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 DNA2P51530 1060 aa15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 SULT6B1Q6IMI4 303 aa15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 MRPS9P82933 396 aaKnown RBP15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 JMYQ8N9B5 988 aa15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 GAS2L2Q8NHY3 880 aa15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 UQCRHLA0A096LP55 91 aa15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 SLC4A8Q2Y0W8 1093 aa15.57■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 KIAA0754O94854 1291 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 TNNT1P13805 278 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 ZC3H6P61129 1189 aaKnown RBP15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 TNMDQ9H2S6 317 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 ADAMTS2O95450 1211 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 CCDC82Q8N4S0 544 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 KIAA1328Q86T90 577 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 HIP1O00291 1037 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 TSPY26PQ9H489 355 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 GOLGA6L7A0A1B0GV03 622 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 PABPN1LA6NDY0 278 aaKnown RBP15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 FEZ1Q99689 392 aa15.56■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 ZNF530Q6P9A1 599 aaPredicted RBP15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 NOP2P46087 812 aaKnown RBP15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 CWC27Q6UX04 472 aaKnown RBP15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 AACSQ86V21 672 aa15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 CYP46A1Q9Y6A2 500 aa15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 EIF5P55010 431 aaKnown RBP15.55■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 TSR2Q969E8 191 aaKnown RBP15.54■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 POLR3DP05423 398 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 CTNNBL1Q8WYA6 563 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 NOB1Q9ULX3 412 aaKnown RBP15.54■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 CCDC175P0C221 793 aa15.54■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 RGS22Q8NE09 1264 aa15.54■□□□□ 0.08
NPHP3-ACAD11-201ENST00000471702 WWC3Q9ULE0 1092 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms