RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 STAC3Q96MF2 364 aa10.27□□□□□ -0.76
CD47-204ENST00000471694 ZNF408Q9H9D4 720 aa10.27□□□□□ -0.76
CD47-204ENST00000471694 HDAC9Q9UKV0 1011 aa10.27□□□□□ -0.76
CD47-204ENST00000471694 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.77
CD47-204ENST00000471694 AKNAQ7Z591 1439 aa10.27□□□□□ -0.77
CD47-204ENST00000471694 SLF2Q8IX21 1173 aa10.27□□□□□ -0.77
CD47-204ENST00000471694 PRKAR2BP31323 418 aa10.27□□□□□ -0.77
CD47-204ENST00000471694 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
CD47-204ENST00000471694 COG6Q9Y2V7 657 aa10.27□□□□□ -0.77
CD47-204ENST00000471694 METTL24Q5JXM2 366 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 RBM26Q5T8P6 1007 aaKnown RBP10.26□□□□□ -0.77
CD47-204ENST00000471694 DDX46Q7L014 1031 aaKnown RBP10.26□□□□□ -0.77
CD47-204ENST00000471694 ZNF287Q9HBT7 754 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 EPRSP07814 1512 aaKnown RBP10.26□□□□□ -0.77
CD47-204ENST00000471694 RRS1Q15050 365 aaKnown RBP10.26□□□□□ -0.77
CD47-204ENST00000471694 PSMA5P28066 241 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 CCDC96Q2M329 555 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 SMC3Q9UQE7 1217 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 AMOTL2Q9Y2J4 779 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 CUX1P39880 1505 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 GNAI3P08754 354 aa10.26□□□□□ -0.77
CD47-204ENST00000471694 HSPA2P54652 639 aa10.25□□□□□ -0.77
CD47-204ENST00000471694 PHF8Q9UPP1 1060 aa10.25□□□□□ -0.77
CD47-204ENST00000471694 A0A087WZG4 1122 aa10.25□□□□□ -0.77
CD47-204ENST00000471694 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
CD47-204ENST00000471694 SSBP05455 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
CD47-204ENST00000471694 OLFM4Q6UX06 510 aa10.25□□□□□ -0.77
CD47-204ENST00000471694 MKNK2Q9HBH9 465 aa10.25□□□□□ -0.77
CD47-204ENST00000471694 JDP2Q8WYK2 163 aa10.25□□□□□ -0.77
CD47-204ENST00000471694 GJA3Q9Y6H8 435 aa10.25□□□□□ -0.77
CD47-204ENST00000471694 CUL5Q93034 780 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 TRMT112Q9UI30 125 aaKnown RBP10.24□□□□□ -0.77
CD47-204ENST00000471694 ERBINQ96RT1 1412 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 TTC16Q8NEE8 873 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 MYO15BQ96JP2 1530 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 USHBP1Q8N6Y0 703 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 NUDT16Q96DE0 195 aaKnown RBP10.24□□□□□ -0.77
CD47-204ENST00000471694 CEP126Q9P2H0 1117 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 HIP1O00291 1037 aa10.24□□□□□ -0.77
CD47-204ENST00000471694 UBAC1Q9BSL1 405 aa10.23□□□□□ -0.77
CD47-204ENST00000471694 IDH1O75874 414 aaKnown RBP10.23□□□□□ -0.77
CD47-204ENST00000471694 IFIT1P09914 478 aaKnown RBP10.23□□□□□ -0.77
CD47-204ENST00000471694 TNNT3P45378 269 aaPredicted RBP10.23□□□□□ -0.77
CD47-204ENST00000471694 CCDC173Q0VFZ6 552 aa10.23□□□□□ -0.77
CD47-204ENST00000471694 INTS3Q68E01 1043 aaKnown RBP10.23□□□□□ -0.77
CD47-204ENST00000471694 SEC63Q9UGP8 760 aaKnown RBP10.23□□□□□ -0.77
CD47-204ENST00000471694 HSP90AB3PQ58FF7 597 aa10.23□□□□□ -0.77
CD47-204ENST00000471694 NBPF6Q5VWK0 638 aa10.23□□□□□ -0.77
CD47-204ENST00000471694 NBPF5PQ86XG9 351 aaPredicted RBP10.23□□□□□ -0.77
CD47-204ENST00000471694 NBPF4Q96M43 638 aa10.23□□□□□ -0.77
CD47-204ENST00000471694 EHMT1Q9H9B1 1298 aa10.23□□□□□ -0.77
CD47-204ENST00000471694 CABP5Q9NP86 173 aa10.23□□□□□ -0.77
CD47-204ENST00000471694 ATF7IPQ6VMQ6 1270 aa10.22□□□□□ -0.77
CD47-204ENST00000471694 CCDC73Q6ZRK6 1079 aa10.22□□□□□ -0.77
CD47-204ENST00000471694 SLC4A2P04920 1241 aa10.22□□□□□ -0.77
CD47-204ENST00000471694 TRIM22Q8IYM9 498 aa10.22□□□□□ -0.77
CD47-204ENST00000471694 OGFOD1Q8N543 542 aa10.22□□□□□ -0.77
CD47-204ENST00000471694 LIG1P18858 919 aa10.22□□□□□ -0.77
CD47-204ENST00000471694 CHRNA2Q15822 529 aa10.22□□□□□ -0.77
CD47-204ENST00000471694 GNAT3A8MTJ3 354 aa10.21□□□□□ -0.77
CD47-204ENST00000471694 ATP6V1AP38606 617 aa10.21□□□□□ -0.77
CD47-204ENST00000471694 GPTP24298 496 aa10.21□□□□□ -0.77
CD47-204ENST00000471694 ARID3AQ99856 593 aa10.21□□□□□ -0.77
CD47-204ENST00000471694 GNAI2P04899 355 aa10.21□□□□□ -0.78
CD47-204ENST00000471694 BAG6P46379 1132 aa10.21□□□□□ -0.78
CD47-204ENST00000471694 IL27Q8NEV9 243 aa10.21□□□□□ -0.78
CD47-204ENST00000471694 WAPLQ7Z5K2 1190 aa10.21□□□□□ -0.78
CD47-204ENST00000471694 AIDAQ96BJ3 306 aa10.21□□□□□ -0.78
CD47-204ENST00000471694 TANGO6Q9C0B7 1094 aa10.21□□□□□ -0.78
CD47-204ENST00000471694 CHMP5Q9NZZ3 219 aa10.21□□□□□ -0.78
CD47-204ENST00000471694 SEPT11Q9NVA2 429 aaKnown RBP10.2□□□□□ -0.78
CD47-204ENST00000471694 SLC5A1P13866 664 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 DDB1Q16531 1140 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 ZNF444Q8N0Y2 327 aaPredicted RBP10.2□□□□□ -0.78
CD47-204ENST00000471694 PPP1R42Q7Z4L9 355 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 SETDB2Q96T68 719 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 NCKAP5LQ9HCH0 1330 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 TWISTNBQ3B726 338 aaPredicted RBP10.2□□□□□ -0.78
CD47-204ENST00000471694 SASS6Q6UVJ0 657 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 SRCIN1Q9C0H9 1055 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 VEZTQ9HBM0 779 aa10.2□□□□□ -0.78
CD47-204ENST00000471694 PLS1Q14651 629 aa10.19□□□□□ -0.78
CD47-204ENST00000471694 EAPPQ56P03 285 aaPredicted RBP10.19□□□□□ -0.78
CD47-204ENST00000471694 MYD88Q99836 296 aa10.19□□□□□ -0.78
CD47-204ENST00000471694 DNAJC5BQ9UF47 199 aa10.19□□□□□ -0.78
CD47-204ENST00000471694 CNTLNQ9NXG0 1405 aa10.19□□□□□ -0.78
CD47-204ENST00000471694 MINDY4BA8MYZ0 360 aa10.19□□□□□ -0.78
CD47-204ENST00000471694 MAP4K4O95819 1239 aaPredicted RBP10.19□□□□□ -0.78
CD47-204ENST00000471694 HLA-DOAP06340 250 aa10.19□□□□□ -0.78
CD47-204ENST00000471694 PDILTQ8N807 584 aa10.19□□□□□ -0.78
CD47-204ENST00000471694 BMP2KQ9NSY1 1161 aaPredicted RBP10.19□□□□□ -0.78
CD47-204ENST00000471694 HOMER1Q86YM7 354 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 FAM135AQ9P2D6 1515 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 NOL7Q9UMY1 257 aaKnown RBP10.18□□□□□ -0.78
CD47-204ENST00000471694 SYNJ1O43426 1573 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 F8W031 263 aaPredicted RBP10.18□□□□□ -0.78
CD47-204ENST00000471694 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
CD47-204ENST00000471694 EP400NLQ6ZTU2 488 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms