RNA–Protein interactions for RNA: ENST00000471596.1

CSRP1-204, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 758 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-204ENST00000471596 USP35Q9P2H5 1018 aa13.02□□□□□ -0.33
CSRP1-204ENST00000471596 CD163L1Q9NR16 1453 aa13.02□□□□□ -0.33
CSRP1-204ENST00000471596 PLEKHG3A1L390 1219 aa13.01□□□□□ -0.33
CSRP1-204ENST00000471596 ZC3H6P61129 1189 aaKnown RBP13.01□□□□□ -0.33
CSRP1-204ENST00000471596 RGPD8O14715 1765 aaPredicted RBP13□□□□□ -0.33
CSRP1-204ENST00000471596 PLCH1Q4KWH8 1693 aa13□□□□□ -0.33
CSRP1-204ENST00000471596 NRKQ7Z2Y5 1582 aa13□□□□□ -0.33
CSRP1-204ENST00000471596 ACEP12821 1306 aa13□□□□□ -0.33
CSRP1-204ENST00000471596 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
CSRP1-204ENST00000471596 APBA3O96018 575 aa13□□□□□ -0.33
CSRP1-204ENST00000471596 EVA1CP58658 441 aa13□□□□□ -0.33
CSRP1-204ENST00000471596 CABP1Q9NZU7 370 aa13□□□□□ -0.33
CSRP1-204ENST00000471596 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
CSRP1-204ENST00000471596 KIAA0232Q92628 1395 aa12.99□□□□□ -0.33
CSRP1-204ENST00000471596 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
CSRP1-204ENST00000471596 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
CSRP1-204ENST00000471596 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
CSRP1-204ENST00000471596 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
CSRP1-204ENST00000471596 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
CSRP1-204ENST00000471596 CAMKK2Q96RR4 588 aa12.98□□□□□ -0.33
CSRP1-204ENST00000471596 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
CSRP1-204ENST00000471596 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
CSRP1-204ENST00000471596 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
CSRP1-204ENST00000471596 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
CSRP1-204ENST00000471596 SUPT16HQ9Y5B9 1047 aaKnown RBP12.96□□□□□ -0.33
CSRP1-204ENST00000471596 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-204ENST00000471596 LRP5O75197 1615 aa12.95□□□□□ -0.34
CSRP1-204ENST00000471596 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
CSRP1-204ENST00000471596 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-204ENST00000471596 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
CSRP1-204ENST00000471596 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
CSRP1-204ENST00000471596 LARP1Q6PKG0 1096 aaKnown RBP12.94□□□□□ -0.34
CSRP1-204ENST00000471596 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
CSRP1-204ENST00000471596 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
CSRP1-204ENST00000471596 NBPF14Q5TI25 921 aa12.93□□□□□ -0.34
CSRP1-204ENST00000471596 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
CSRP1-204ENST00000471596 COL14A1Q05707 1796 aaKnown RBP12.93□□□□□ -0.34
CSRP1-204ENST00000471596 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
CSRP1-204ENST00000471596 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
CSRP1-204ENST00000471596 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
CSRP1-204ENST00000471596 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
CSRP1-204ENST00000471596 YY1P25490 414 aa12.91□□□□□ -0.34
CSRP1-204ENST00000471596 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
CSRP1-204ENST00000471596 PPP1R1BQ9UD71 204 aaPredicted RBP12.91□□□□□ -0.34
CSRP1-204ENST00000471596 NUDCQ9Y266 331 aa12.91□□□□□ -0.34
CSRP1-204ENST00000471596 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
CSRP1-204ENST00000471596 NEFLP07196 543 aa12.9□□□□□ -0.34
CSRP1-204ENST00000471596 NLRP6P59044 892 aa12.9□□□□□ -0.34
CSRP1-204ENST00000471596 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
CSRP1-204ENST00000471596 HDGFL2Q7Z4V5 671 aaPredicted RBP12.9□□□□□ -0.34
CSRP1-204ENST00000471596 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
CSRP1-204ENST00000471596 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
CSRP1-204ENST00000471596 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
CSRP1-204ENST00000471596 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
CSRP1-204ENST00000471596 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
CSRP1-204ENST00000471596 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
CSRP1-204ENST00000471596 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
CSRP1-204ENST00000471596 GCP02774 474 aa12.87□□□□□ -0.35
CSRP1-204ENST00000471596 SPON1Q9HCB6 807 aa12.87□□□□□ -0.35
CSRP1-204ENST00000471596 TTC21BQ7Z4L5 1316 aa12.87□□□□□ -0.35
CSRP1-204ENST00000471596 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
CSRP1-204ENST00000471596 WDR43Q15061 677 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSRP1-204ENST00000471596 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
CSRP1-204ENST00000471596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSRP1-204ENST00000471596 USP6P35125 1406 aa12.86□□□□□ -0.35
CSRP1-204ENST00000471596 KCNQ2O43526 872 aa12.85□□□□□ -0.35
CSRP1-204ENST00000471596 THRAP3Q9Y2W1 955 aaKnown RBP12.85□□□□□ -0.35
CSRP1-204ENST00000471596 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
CSRP1-204ENST00000471596 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
CSRP1-204ENST00000471596 CAMTA1Q9Y6Y1 1673 aa12.84□□□□□ -0.35
CSRP1-204ENST00000471596 FKBP8Q14318 412 aa12.84□□□□□ -0.35
CSRP1-204ENST00000471596 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
CSRP1-204ENST00000471596 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
CSRP1-204ENST00000471596 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
CSRP1-204ENST00000471596 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
CSRP1-204ENST00000471596 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.36
CSRP1-204ENST00000471596 CPDO75976 1380 aa12.82□□□□□ -0.36
CSRP1-204ENST00000471596 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
CSRP1-204ENST00000471596 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
CSRP1-204ENST00000471596 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-204ENST00000471596 USP19O94966 1318 aa12.82□□□□□ -0.36
CSRP1-204ENST00000471596 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
CSRP1-204ENST00000471596 SOX12O15370 315 aa12.81□□□□□ -0.36
CSRP1-204ENST00000471596 DDB1Q16531 1140 aa12.81□□□□□ -0.36
CSRP1-204ENST00000471596 PDGFDQ9GZP0 370 aaPredicted RBP12.81□□□□□ -0.36
CSRP1-204ENST00000471596 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
CSRP1-204ENST00000471596 CRYBG1Q9Y4K1 1723 aa12.8□□□□□ -0.36
CSRP1-204ENST00000471596 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
CSRP1-204ENST00000471596 NME9Q86XW9 330 aa12.8□□□□□ -0.36
CSRP1-204ENST00000471596 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
CSRP1-204ENST00000471596 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
CSRP1-204ENST00000471596 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
CSRP1-204ENST00000471596 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
CSRP1-204ENST00000471596 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
CSRP1-204ENST00000471596 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
CSRP1-204ENST00000471596 PHRF1Q9P1Y6 1649 aaKnown RBP12.78□□□□□ -0.36
CSRP1-204ENST00000471596 FYB1O15117 783 aa12.78□□□□□ -0.36
CSRP1-204ENST00000471596 PLSCR1O15162 318 aa12.78□□□□□ -0.36
CSRP1-204ENST00000471596 CSB-PGBD3P0DP91 1061 aa12.78□□□□□ -0.36
CSRP1-204ENST00000471596 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms