RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	NFAT5	O94916	1531 aa		34.06	■■■■□ 3.04
U2AF1-208	ENST00000471250	HMOX1	P09601	288 aa		34.06	■■■■□ 3.04
U2AF1-208	ENST00000471250	WDR63	Q8IWG1	891 aa		34.06	■■■■□ 3.04
U2AF1-208	ENST00000471250	RGPD1	P0DJD0	1748 aa		34.06	■■■■□ 3.04
U2AF1-208	ENST00000471250	RCAN3	Q9UKA8	241 aa		34.05	■■■■□ 3.04
U2AF1-208	ENST00000471250	KCNH5	Q8NCM2	988 aa		34.04	■■■■□ 3.04
U2AF1-208	ENST00000471250	SPINK5	Q9NQ38	1064 aa	Predicted RBP	34.04	■■■■□ 3.04
U2AF1-208	ENST00000471250	SLIT3	O75094	1523 aa		34.04	■■■■□ 3.04
U2AF1-208	ENST00000471250	ALS2	Q96Q42	1657 aa		34.03	■■■■□ 3.04
U2AF1-208	ENST00000471250	NEFM	P07197	916 aa		34.03	■■■■□ 3.04
U2AF1-208	ENST00000471250	NPHP3	Q7Z494	1330 aa		34.02	■■■■□ 3.04
U2AF1-208	ENST00000471250	RTL1	A6NKG5	1358 aa		34.01	■■■■□ 3.04
U2AF1-208	ENST00000471250	LTN1	O94822	1766 aa		34.01	■■■■□ 3.03
U2AF1-208	ENST00000471250	HOXC9	P31274	260 aa		34	■■■■□ 3.03
U2AF1-208	ENST00000471250	USP19	O94966	1318 aa		33.99	■■■■□ 3.03
U2AF1-208	ENST00000471250	TRIM35	Q9UPQ4	493 aa		33.97	■■■■□ 3.03
U2AF1-208	ENST00000471250	ARHGEF10	O15013	1369 aa		33.97	■■■■□ 3.03
U2AF1-208	ENST00000471250	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.97	■■■■□ 3.03
U2AF1-208	ENST00000471250	RIPK4	P57078	832 aa		33.96	■■■■□ 3.03
U2AF1-208	ENST00000471250	PHACTR3	Q96KR7	559 aa		33.96	■■■■□ 3.03
U2AF1-208	ENST00000471250	BRINP3	Q76B58	766 aa		33.96	■■■■□ 3.03
U2AF1-208	ENST00000471250	DDX17	Q92841	729 aa	Known RBP	33.96	■■■■□ 3.03
U2AF1-208	ENST00000471250	PXDN	Q92626	1479 aa		33.95	■■■■□ 3.03
U2AF1-208	ENST00000471250	IRX6	P78412	446 aa	Predicted RBP	33.95	■■■■□ 3.03
U2AF1-208	ENST00000471250	SULT6B1	Q6IMI4	303 aa		33.95	■■■■□ 3.03
U2AF1-208	ENST00000471250	LMOD2	Q6P5Q4	547 aa		33.95	■■■■□ 3.03
U2AF1-208	ENST00000471250	SLAIN2	Q9P270	581 aa		33.95	■■■■□ 3.03
U2AF1-208	ENST00000471250	NFE2L2	Q16236	605 aa		33.94	■■■■□ 3.02
U2AF1-208	ENST00000471250	ERICH6B	Q5W0A0	696 aa		33.94	■■■■□ 3.02
U2AF1-208	ENST00000471250	GC	P02774	474 aa		33.93	■■■■□ 3.02
U2AF1-208	ENST00000471250	IP6K1	Q92551	441 aa		33.93	■■■■□ 3.02
U2AF1-208	ENST00000471250	AEBP1	Q8IUX7	1158 aa		33.92	■■■■□ 3.02
U2AF1-208	ENST00000471250	IGSF1	Q8N6C5	1336 aa		33.9	■■■■□ 3.02
U2AF1-208	ENST00000471250	TNS3	Q68CZ2	1445 aa		33.9	■■■■□ 3.02
U2AF1-208	ENST00000471250	RRP1	P56182	461 aa	Known RBP	33.89	■■■■□ 3.02
U2AF1-208	ENST00000471250	EYA1	Q99502	592 aa		33.89	■■■■□ 3.02
U2AF1-208	ENST00000471250	MED1	Q15648	1581 aa	Predicted RBP	33.88	■■■■□ 3.01
U2AF1-208	ENST00000471250	IL16	Q14005	1332 aa		33.88	■■■■□ 3.01
U2AF1-208	ENST00000471250	ARHGEF25	Q86VW2	580 aa		33.87	■■■■□ 3.01
U2AF1-208	ENST00000471250	KDR	P35968	1356 aa		33.87	■■■■□ 3.01
U2AF1-208	ENST00000471250	SPATA31A3	Q5VYP0	1347 aa		33.86	■■■■□ 3.01
U2AF1-208	ENST00000471250	MYH16	Q9H6N6	1097 aa		33.85	■■■■□ 3.01
U2AF1-208	ENST00000471250	DLG5	Q8TDM6	1919 aa		33.84	■■■■□ 3.01
U2AF1-208	ENST00000471250	LMOD3	Q0VAK6	560 aa		33.8	■■■■□ 3
U2AF1-208	ENST00000471250	LTBP4	Q8N2S1	1624 aa		33.8	■■■■□ 3
U2AF1-208	ENST00000471250	SOS2	Q07890	1332 aa	Predicted RBP	33.8	■■■■□ 3
U2AF1-208	ENST00000471250	LTV1	Q96GA3	475 aa	Predicted RBP	33.79	■■■■□ 3
U2AF1-208	ENST00000471250	ZBTB7C	A1YPR0	619 aa		33.78	■■■■□ 3
U2AF1-208	ENST00000471250	PLEKHG5	O94827	1062 aa		33.78	■■■■□ 3
U2AF1-208	ENST00000471250	CRYBG1	Q9Y4K1	1723 aa		33.78	■■■■□ 3
U2AF1-208	ENST00000471250	NHSL1	Q5SYE7	1610 aa		33.76	■■■□□ 2.99
U2AF1-208	ENST00000471250	CALD1	Q05682	793 aa	Known RBP	33.75	■■■□□ 2.99
U2AF1-208	ENST00000471250	FANCI	Q9NVI1	1328 aa		33.74	■■■□□ 2.99
U2AF1-208	ENST00000471250	PPP4R2	Q9NY27	417 aa		33.71	■■■□□ 2.99
U2AF1-208	ENST00000471250	ZC3H6	P61129	1189 aa	Known RBP	33.7	■■■□□ 2.99
U2AF1-208	ENST00000471250	TSR2	Q969E8	191 aa	Known RBP	33.7	■■■□□ 2.99
U2AF1-208	ENST00000471250	NBPF6	Q5VWK0	638 aa		33.68	■■■□□ 2.98
U2AF1-208	ENST00000471250	NBPF4	Q96M43	638 aa		33.68	■■■□□ 2.98
U2AF1-208	ENST00000471250	RGPD2	P0DJD1	1756 aa		33.68	■■■□□ 2.98
U2AF1-208	ENST00000471250	MTHFSD	Q2M296	383 aa	Known RBP	33.68	■■■□□ 2.98
U2AF1-208	ENST00000471250	CABLES1	Q8TDN4	633 aa		33.68	■■■□□ 2.98
U2AF1-208	ENST00000471250	THUMPD2	Q9BTF0	503 aa	Known RBP	33.68	■■■□□ 2.98
U2AF1-208	ENST00000471250	COL18A1	P39060	1754 aa		33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	RGPD5	Q99666	1765 aa		33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	PLIN1	O60240	522 aa		33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	CT47B1	P0C2W7	299 aa	Predicted RBP	33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	GAS2L2	Q8NHY3	880 aa		33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	ANKRD24	Q8TF21	1146 aa		33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	AXIN2	Q9Y2T1	843 aa		33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	ABCC6	O95255	1503 aa		33.67	■■■□□ 2.98
U2AF1-208	ENST00000471250	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	33.66	■■■□□ 2.98
U2AF1-208	ENST00000471250	IFT57	Q9NWB7	429 aa		33.66	■■■□□ 2.98
U2AF1-208	ENST00000471250	NCAPD2	Q15021	1401 aa		33.65	■■■□□ 2.98
U2AF1-208	ENST00000471250	CAMTA1	Q9Y6Y1	1673 aa		33.65	■■■□□ 2.98
U2AF1-208	ENST00000471250	FAM83G	A6ND36	823 aa		33.64	■■■□□ 2.98
U2AF1-208	ENST00000471250	ZNF853	P0CG23	659 aa		33.64	■■■□□ 2.98
U2AF1-208	ENST00000471250	GNAI1	P63096	354 aa		33.64	■■■□□ 2.98
U2AF1-208	ENST00000471250	CPD	O75976	1380 aa		33.64	■■■□□ 2.98
U2AF1-208	ENST00000471250	USHBP1	Q8N6Y0	703 aa		33.64	■■■□□ 2.98
U2AF1-208	ENST00000471250	EXOSC9	Q06265	439 aa	Known RBP	33.63	■■■□□ 2.97
U2AF1-208	ENST00000471250	BCAR3	O75815	825 aa		33.62	■■■□□ 2.97
U2AF1-208	ENST00000471250	RARS	P54136	660 aa	Known RBP	33.62	■■■□□ 2.97
U2AF1-208	ENST00000471250	DCTN1	Q14203	1278 aa		33.61	■■■□□ 2.97
U2AF1-208	ENST00000471250	LRRC59	Q96AG4	307 aa	Known RBP	33.61	■■■□□ 2.97
U2AF1-208	ENST00000471250	CFAP44	Q96MT7	982 aa		33.6	■■■□□ 2.97
U2AF1-208	ENST00000471250	LAS1L	Q9Y4W2	734 aa	Known RBP	33.6	■■■□□ 2.97
U2AF1-208	ENST00000471250	ROBO1	Q9Y6N7	1651 aa		33.59	■■■□□ 2.97
U2AF1-208	ENST00000471250	ERBB3	P21860	1342 aa		33.58	■■■□□ 2.97
U2AF1-208	ENST00000471250	HTATSF1	O43719	755 aa	Known RBP	33.58	■■■□□ 2.97
U2AF1-208	ENST00000471250	LMO7	Q8WWI1	1683 aa		33.57	■■■□□ 2.96
U2AF1-208	ENST00000471250	KIAA0232	Q92628	1395 aa		33.57	■■■□□ 2.96
U2AF1-208	ENST00000471250	ABCA3	Q99758	1704 aa		33.57	■■■□□ 2.96
U2AF1-208	ENST00000471250	MCM10	Q7L590	875 aa		33.55	■■■□□ 2.96
U2AF1-208	ENST00000471250	EXOC6	Q8TAG9	804 aa		33.55	■■■□□ 2.96
U2AF1-208	ENST00000471250	RTF1	Q92541	710 aa	Known RBP	33.55	■■■□□ 2.96
U2AF1-208	ENST00000471250	MBIP	Q9NS73	344 aa		33.55	■■■□□ 2.96
U2AF1-208	ENST00000471250	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.54	■■■□□ 2.96
U2AF1-208	ENST00000471250	CRB1	P82279	1406 aa		33.53	■■■□□ 2.96
U2AF1-208	ENST00000471250	C20orf194	Q5TEA3	1177 aa		33.52	■■■□□ 2.96
U2AF1-208	ENST00000471250	FAM208A	Q9UK61	1670 aa	Known RBP	33.52	■■■□□ 2.96

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms