RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 SLC12A5Q9H2X9 1139 aa14.07□□□□□ -0.16
SRGAP3-204ENST00000470951 LMTK2Q8IWU2 1503 aa14.07□□□□□ -0.16
SRGAP3-204ENST00000470951 ADGRB1O14514 1584 aa14.07□□□□□ -0.16
SRGAP3-204ENST00000470951 GAS2L3Q86XJ1 694 aa14.07□□□□□ -0.16
SRGAP3-204ENST00000470951 SSH1Q8WYL5 1049 aa14.07□□□□□ -0.16
SRGAP3-204ENST00000470951 ANP32BQ92688 251 aaKnown RBP14.07□□□□□ -0.16
SRGAP3-204ENST00000470951 ANKRD36BQ8N2N9 1353 aa14.07□□□□□ -0.16
SRGAP3-204ENST00000470951 EXOSC9Q06265 439 aaKnown RBP14.06□□□□□ -0.16
SRGAP3-204ENST00000470951 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
SRGAP3-204ENST00000470951 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
SRGAP3-204ENST00000470951 ALDH1L2Q3SY69 923 aa14.05□□□□□ -0.16
SRGAP3-204ENST00000470951 CHD1LQ86WJ1 897 aa14.05□□□□□ -0.16
SRGAP3-204ENST00000470951 ZNF428Q96B54 188 aa14.05□□□□□ -0.16
SRGAP3-204ENST00000470951 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
SRGAP3-204ENST00000470951 ZSCAN30Q86W11 494 aa14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 C14orf93Q9H972 538 aaKnown RBP14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 MED14O60244 1454 aa14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 KLHL40Q2TBA0 621 aa14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 HS1BP3Q53T59 392 aa14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 TMEM57Q8N5G2 664 aa14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
SRGAP3-204ENST00000470951 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 PLEKHF1Q96S99 279 aa14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 KIF2CQ99661 725 aa14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 ARHGEF40Q8TER5 1519 aa14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 ANKRD26Q9UPS8 1709 aa14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 KIF3BO15066 747 aa14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 NASPP49321 788 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-204ENST00000470951 SIGLEC1Q9BZZ2 1709 aa14.02□□□□□ -0.16
SRGAP3-204ENST00000470951 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.02□□□□□ -0.16
SRGAP3-204ENST00000470951 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.16
SRGAP3-204ENST00000470951 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.17
SRGAP3-204ENST00000470951 OFD1O75665 1012 aa14.02□□□□□ -0.17
SRGAP3-204ENST00000470951 UTP14CQ5TAP6 766 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-204ENST00000470951 TEX2Q8IWB9 1127 aa14.02□□□□□ -0.17
SRGAP3-204ENST00000470951 RPGRIP1LQ68CZ1 1315 aa14.02□□□□□ -0.17
SRGAP3-204ENST00000470951 EVC2Q86UK5 1308 aa14.02□□□□□ -0.17
SRGAP3-204ENST00000470951 TRAK1Q9UPV9 953 aa14.01□□□□□ -0.17
SRGAP3-204ENST00000470951 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
SRGAP3-204ENST00000470951 ARHGEF28Q8N1W1 1705 aaKnown RBP14□□□□□ -0.17
SRGAP3-204ENST00000470951 MLECQ14165 292 aa14□□□□□ -0.17
SRGAP3-204ENST00000470951 MAP7D2Q96T17 732 aa14□□□□□ -0.17
SRGAP3-204ENST00000470951 ZNF445P59923 1031 aa13.99□□□□□ -0.17
SRGAP3-204ENST00000470951 KIAA1211Q6ZU35 1233 aa13.99□□□□□ -0.17
SRGAP3-204ENST00000470951 PPIP5K1Q6PFW1 1433 aa13.99□□□□□ -0.17
SRGAP3-204ENST00000470951 MSNP26038 577 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-204ENST00000470951 TULP4Q9NRJ4 1543 aa13.99□□□□□ -0.17
SRGAP3-204ENST00000470951 ARHGAP45Q92619 1136 aa13.98□□□□□ -0.17
SRGAP3-204ENST00000470951 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
SRGAP3-204ENST00000470951 NUCB2P80303 420 aa13.98□□□□□ -0.17
SRGAP3-204ENST00000470951 DDX49Q9Y6V7 483 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-204ENST00000470951 BAG4O95429 457 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-204ENST00000470951 TBC1D9Q6ZT07 1266 aa13.97□□□□□ -0.17
SRGAP3-204ENST00000470951 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
SRGAP3-204ENST00000470951 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
SRGAP3-204ENST00000470951 CDC45O75419 566 aa13.96□□□□□ -0.17
SRGAP3-204ENST00000470951 SSFA2P28290 1259 aa13.96□□□□□ -0.17
SRGAP3-204ENST00000470951 RABEP1Q15276 862 aa13.96□□□□□ -0.17
SRGAP3-204ENST00000470951 GGT6Q6P531 493 aa13.96□□□□□ -0.17
SRGAP3-204ENST00000470951 TMEM51Q9NW97 253 aa13.96□□□□□ -0.17
SRGAP3-204ENST00000470951 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.17
SRGAP3-204ENST00000470951 PTCH1Q13635 1447 aa13.96□□□□□ -0.17
SRGAP3-204ENST00000470951 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.18
SRGAP3-204ENST00000470951 CD2BP2O95400 341 aaKnown RBP13.96□□□□□ -0.18
SRGAP3-204ENST00000470951 RIPK4P57078 832 aa13.95□□□□□ -0.18
SRGAP3-204ENST00000470951 ANKRD45Q5TZF3 282 aa13.95□□□□□ -0.18
SRGAP3-204ENST00000470951 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
SRGAP3-204ENST00000470951 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-204ENST00000470951 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-204ENST00000470951 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-204ENST00000470951 AK9Q5TCS8 1911 aa13.94□□□□□ -0.18
SRGAP3-204ENST00000470951 PDLIM2Q96JY6 352 aa13.94□□□□□ -0.18
SRGAP3-204ENST00000470951 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-204ENST00000470951 NOL7Q9UMY1 257 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-204ENST00000470951 MCM5P33992 734 aa13.93□□□□□ -0.18
SRGAP3-204ENST00000470951 CYP2E1P05181 493 aaPredicted RBP13.93□□□□□ -0.18
SRGAP3-204ENST00000470951 PNPLA6Q8IY17 1366 aa13.93□□□□□ -0.18
SRGAP3-204ENST00000470951 ZFYVE9O95405 1425 aa13.92□□□□□ -0.18
SRGAP3-204ENST00000470951 MTERF4Q7Z6M4 381 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-204ENST00000470951 A0A1W2PP64 1363 aa13.92□□□□□ -0.18
SRGAP3-204ENST00000470951 KIF24Q5T7B8 1368 aa13.91□□□□□ -0.18
SRGAP3-204ENST00000470951 FCHSD2O94868 740 aa13.91□□□□□ -0.18
SRGAP3-204ENST00000470951 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
SRGAP3-204ENST00000470951 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
SRGAP3-204ENST00000470951 NPATQ14207 1427 aa13.91□□□□□ -0.18
SRGAP3-204ENST00000470951 PIK3C2BO00750 1634 aa13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 DMTNQ08495 405 aa13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 ZSCAN23Q3MJ62 389 aa13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 TMEM132EQ6IEE7 984 aa13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 ZNF830Q96NB3 372 aaPredicted RBP13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 LMBRD1Q9NUN5 540 aa13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 BCCIPQ9P287 314 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 CLTCQ00610 1675 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 ABCC4O15439 1325 aa13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 ATAD2Q6PL18 1390 aa13.9□□□□□ -0.18
SRGAP3-204ENST00000470951 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms