RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 PRR20BP86481 221 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 PRR20AP86496 221 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 CEP170Q5SW79 1584 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 ARMC2Q8NEN0 867 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 RUSC2Q8N2Y8 1516 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
PTP4A1-202ENST00000470661 TTBK1Q5TCY1 1321 aaPredicted RBP11.37□□□□□ -0.59
PTP4A1-202ENST00000470661 AGERQ15109 404 aa11.37□□□□□ -0.59
PTP4A1-202ENST00000470661 NRG2O14511 850 aaPredicted RBP11.36□□□□□ -0.59
PTP4A1-202ENST00000470661 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
PTP4A1-202ENST00000470661 NUP160Q12769 1436 aa11.35□□□□□ -0.59
PTP4A1-202ENST00000470661 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
PTP4A1-202ENST00000470661 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
PTP4A1-202ENST00000470661 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
PTP4A1-202ENST00000470661 SH3BP5LQ7L8J4 393 aa11.34□□□□□ -0.59
PTP4A1-202ENST00000470661 TOR4AQ9NXH8 423 aa11.34□□□□□ -0.59
PTP4A1-202ENST00000470661 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
PTP4A1-202ENST00000470661 TTC24A2A3L6 582 aaPredicted RBP11.33□□□□□ -0.6
PTP4A1-202ENST00000470661 BPHLQ86WA6 291 aaPredicted RBP11.33□□□□□ -0.6
PTP4A1-202ENST00000470661 CARD14Q9BXL6 1004 aa11.33□□□□□ -0.6
PTP4A1-202ENST00000470661 TLL2Q9Y6L7 1015 aa11.33□□□□□ -0.6
PTP4A1-202ENST00000470661 CARMIL1Q5VZK9 1371 aa11.32□□□□□ -0.6
PTP4A1-202ENST00000470661 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
PTP4A1-202ENST00000470661 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
PTP4A1-202ENST00000470661 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 SIAH2O43255 324 aa11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 VARSP26640 1264 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 MCM6Q14566 821 aa11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 SNIP1Q8TAD8 396 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 GPKOWQ92917 476 aaPredicted RBP eCLIP11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 ZC3H4Q9UPT8 1303 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-202ENST00000470661 J3QL48 77 aa11.3□□□□□ -0.6
PTP4A1-202ENST00000470661 PDXDC2PQ6P474 469 aa11.3□□□□□ -0.6
PTP4A1-202ENST00000470661 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
PTP4A1-202ENST00000470661 ARHGAP9Q9BRR9 750 aa11.3□□□□□ -0.6
PTP4A1-202ENST00000470661 SOCS7O14512 581 aa11.29□□□□□ -0.6
PTP4A1-202ENST00000470661 GPR37L1O60883 481 aa11.29□□□□□ -0.6
PTP4A1-202ENST00000470661 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
PTP4A1-202ENST00000470661 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
PTP4A1-202ENST00000470661 OCSTAMPQ9BR26 566 aa11.29□□□□□ -0.6
PTP4A1-202ENST00000470661 TBC1D2BQ9UPU7 963 aa11.29□□□□□ -0.6
PTP4A1-202ENST00000470661 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
PTP4A1-202ENST00000470661 Q6ZNB5 142 aa11.28□□□□□ -0.6
PTP4A1-202ENST00000470661 FAM9AQ8IZU1 332 aaPredicted RBP11.28□□□□□ -0.6
PTP4A1-202ENST00000470661 APBB1O00213 710 aa11.27□□□□□ -0.61
PTP4A1-202ENST00000470661 SMPD1P17405 629 aa11.27□□□□□ -0.61
PTP4A1-202ENST00000470661 ARID5BQ14865 1188 aa11.27□□□□□ -0.61
PTP4A1-202ENST00000470661 PKDCCQ504Y2 493 aa11.27□□□□□ -0.61
PTP4A1-202ENST00000470661 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
PTP4A1-202ENST00000470661 PTK2Q05397 1052 aa11.26□□□□□ -0.61
PTP4A1-202ENST00000470661 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
PTP4A1-202ENST00000470661 ZBTB33Q86T24 672 aa11.25□□□□□ -0.61
PTP4A1-202ENST00000470661 ADAM32Q8TC27 787 aa11.24□□□□□ -0.61
PTP4A1-202ENST00000470661 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
PTP4A1-202ENST00000470661 DGAT1O75907 488 aa11.23□□□□□ -0.61
PTP4A1-202ENST00000470661 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
PTP4A1-202ENST00000470661 GPSM3Q9Y4H4 160 aa11.23□□□□□ -0.61
PTP4A1-202ENST00000470661 FBXO45P0C2W1 286 aa11.22□□□□□ -0.61
PTP4A1-202ENST00000470661 WASF2Q9Y6W5 498 aa11.22□□□□□ -0.61
PTP4A1-202ENST00000470661 KIAA0586Q9BVV6 1533 aa11.21□□□□□ -0.61
PTP4A1-202ENST00000470661 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
PTP4A1-202ENST00000470661 LCE2BO14633 110 aa11.21□□□□□ -0.61
PTP4A1-202ENST00000470661 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.61
PTP4A1-202ENST00000470661 HPS1Q92902 700 aa11.21□□□□□ -0.61
PTP4A1-202ENST00000470661 ABL2P42684 1182 aa11.2□□□□□ -0.62
PTP4A1-202ENST00000470661 RANGAP1P46060 587 aaPredicted RBP11.2□□□□□ -0.62
PTP4A1-202ENST00000470661 FLIIQ13045 1269 aa11.2□□□□□ -0.62
PTP4A1-202ENST00000470661 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
PTP4A1-202ENST00000470661 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
PTP4A1-202ENST00000470661 CDK15Q96Q40 435 aa11.2□□□□□ -0.62
PTP4A1-202ENST00000470661 CUL7Q14999 1698 aa11.2□□□□□ -0.62
PTP4A1-202ENST00000470661 ADH1CP00326 375 aa11.19□□□□□ -0.62
PTP4A1-202ENST00000470661 MPNDQ8N594 471 aa11.19□□□□□ -0.62
PTP4A1-202ENST00000470661 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
PTP4A1-202ENST00000470661 GRM5P41594 1212 aa11.18□□□□□ -0.62
PTP4A1-202ENST00000470661 MYT1Q01538 1121 aa11.18□□□□□ -0.62
PTP4A1-202ENST00000470661 IRF5Q13568 498 aa11.18□□□□□ -0.62
PTP4A1-202ENST00000470661 VASH1Q7L8A9 365 aaPredicted RBP11.18□□□□□ -0.62
PTP4A1-202ENST00000470661 COG6Q9Y2V7 657 aa11.18□□□□□ -0.62
PTP4A1-202ENST00000470661 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
PTP4A1-202ENST00000470661 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
PTP4A1-202ENST00000470661 FSHRP23945 695 aa11.17□□□□□ -0.62
PTP4A1-202ENST00000470661 NR1H3Q13133 447 aa11.17□□□□□ -0.62
PTP4A1-202ENST00000470661 NNTQ13423 1086 aa11.17□□□□□ -0.62
PTP4A1-202ENST00000470661 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
PTP4A1-202ENST00000470661 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
PTP4A1-202ENST00000470661 MAP4K5Q9Y4K4 846 aa11.16□□□□□ -0.62
PTP4A1-202ENST00000470661 PCDHB9Q9Y5E1 797 aa11.16□□□□□ -0.62
PTP4A1-202ENST00000470661 PTPRGP23470 1445 aa11.16□□□□□ -0.62
PTP4A1-202ENST00000470661 AVPP01185 164 aa11.15□□□□□ -0.62
PTP4A1-202ENST00000470661 NR3C2P08235 984 aa11.15□□□□□ -0.62
PTP4A1-202ENST00000470661 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
PTP4A1-202ENST00000470661 ARID3CA6NKF2 412 aa11.14□□□□□ -0.63
PTP4A1-202ENST00000470661 FAM69CQ0P6D2 419 aa11.13□□□□□ -0.63
PTP4A1-202ENST00000470661 KCTD15Q96SI1 283 aaPredicted RBP11.13□□□□□ -0.63
PTP4A1-202ENST00000470661 VAC14Q08AM6 782 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms