RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 CHMP4BQ9H444 224 aaKnown RBP16.41■□□□□ 0.22
SFXN3-205ENST00000470252 CDC42BPGQ6DT37 1551 aa16.4■□□□□ 0.22
SFXN3-205ENST00000470252 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
SFXN3-205ENST00000470252 FAM135BQ49AJ0 1406 aa16.4■□□□□ 0.22
SFXN3-205ENST00000470252 K7ELQ4 463 aaPredicted RBP16.4■□□□□ 0.22
SFXN3-205ENST00000470252 SKOR2Q2VWA4 1001 aaPredicted RBP16.4■□□□□ 0.22
SFXN3-205ENST00000470252 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
SFXN3-205ENST00000470252 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
SFXN3-205ENST00000470252 VAMP4O75379 141 aa16.39■□□□□ 0.21
SFXN3-205ENST00000470252 GAS2L3Q86XJ1 694 aa16.39■□□□□ 0.21
SFXN3-205ENST00000470252 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
SFXN3-205ENST00000470252 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
SFXN3-205ENST00000470252 PTCH1Q13635 1447 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 FBLN1P23142 703 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 CABP1Q9NZU7 370 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 YTHDC2Q9H6S0 1430 aaKnown RBP16.38■□□□□ 0.21
SFXN3-205ENST00000470252 NEO1Q92859 1461 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 ESPNB1AK53 854 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 ELL2O00472 640 aaPredicted RBP16.38■□□□□ 0.21
SFXN3-205ENST00000470252 HMOX1P09601 288 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 PTMSP20962 102 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 ARHGAP45Q92619 1136 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
SFXN3-205ENST00000470252 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
SFXN3-205ENST00000470252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.21
SFXN3-205ENST00000470252 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
SFXN3-205ENST00000470252 TRIM44Q96DX7 344 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-205ENST00000470252 PHACTR3Q96KR7 559 aa16.37■□□□□ 0.21
SFXN3-205ENST00000470252 PIK3R4Q99570 1358 aa16.37■□□□□ 0.21
SFXN3-205ENST00000470252 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
SFXN3-205ENST00000470252 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
SFXN3-205ENST00000470252 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
SFXN3-205ENST00000470252 SLC52A1Q9NWF4 448 aa16.36■□□□□ 0.21
SFXN3-205ENST00000470252 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
SFXN3-205ENST00000470252 DLG5Q8TDM6 1919 aa16.35■□□□□ 0.21
SFXN3-205ENST00000470252 TMEM131LA2VDJ0 1609 aa16.35■□□□□ 0.21
SFXN3-205ENST00000470252 ARHGAP31Q2M1Z3 1444 aa16.35■□□□□ 0.21
SFXN3-205ENST00000470252 ABCC4O15439 1325 aa16.35■□□□□ 0.21
SFXN3-205ENST00000470252 CDC45O75419 566 aa16.35■□□□□ 0.21
SFXN3-205ENST00000470252 SSFA2P28290 1259 aa16.35■□□□□ 0.21
SFXN3-205ENST00000470252 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
SFXN3-205ENST00000470252 GNAI1P63096 354 aa16.35■□□□□ 0.21
SFXN3-205ENST00000470252 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
SFXN3-205ENST00000470252 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
SFXN3-205ENST00000470252 IFT57Q9NWB7 429 aa16.34■□□□□ 0.21
SFXN3-205ENST00000470252 PREX1Q8TCU6 1659 aa16.33■□□□□ 0.2
SFXN3-205ENST00000470252 REREQ9P2R6 1566 aa16.33■□□□□ 0.2
SFXN3-205ENST00000470252 GOLGA6L22H0YM25 854 aa16.33■□□□□ 0.2
SFXN3-205ENST00000470252 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.2
SFXN3-205ENST00000470252 TWISTNBQ3B726 338 aaPredicted RBP16.33■□□□□ 0.2
SFXN3-205ENST00000470252 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
SFXN3-205ENST00000470252 KNDC1Q76NI1 1749 aa16.31■□□□□ 0.2
SFXN3-205ENST00000470252 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
SFXN3-205ENST00000470252 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
SFXN3-205ENST00000470252 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
SFXN3-205ENST00000470252 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
SFXN3-205ENST00000470252 BAG4O95429 457 aaKnown RBP16.29■□□□□ 0.2
SFXN3-205ENST00000470252 PLEKHM2Q8IWE5 1019 aa16.29■□□□□ 0.2
SFXN3-205ENST00000470252 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
SFXN3-205ENST00000470252 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
SFXN3-205ENST00000470252 CLEC17AQ6ZS10 378 aa16.28■□□□□ 0.2
SFXN3-205ENST00000470252 RABEP1Q15276 862 aa16.28■□□□□ 0.2
SFXN3-205ENST00000470252 IL13P35225 146 aa16.27■□□□□ 0.2
SFXN3-205ENST00000470252 NASPP49321 788 aaPredicted RBP16.27■□□□□ 0.2
SFXN3-205ENST00000470252 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
SFXN3-205ENST00000470252 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
SFXN3-205ENST00000470252 ATP7BP35670 1465 aa16.27■□□□□ 0.2
SFXN3-205ENST00000470252 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.2
SFXN3-205ENST00000470252 TTC22Q5TAA0 569 aa16.27■□□□□ 0.2
SFXN3-205ENST00000470252 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
SFXN3-205ENST00000470252 RICTORQ6R327 1708 aa16.26■□□□□ 0.19
SFXN3-205ENST00000470252 FAM83GA6ND36 823 aa16.26■□□□□ 0.19
SFXN3-205ENST00000470252 DCTPP1Q9H773 170 aa16.26■□□□□ 0.19
SFXN3-205ENST00000470252 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
SFXN3-205ENST00000470252 C16orf71Q8IYS4 520 aaPredicted RBP16.25■□□□□ 0.19
SFXN3-205ENST00000470252 ANP32BQ92688 251 aaKnown RBP16.25■□□□□ 0.19
SFXN3-205ENST00000470252 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
SFXN3-205ENST00000470252 HSP90AA2PQ14568 343 aaPredicted RBP16.25■□□□□ 0.19
SFXN3-205ENST00000470252 MCTP1Q6DN14 999 aa16.25■□□□□ 0.19
SFXN3-205ENST00000470252 USP26Q9BXU7 913 aa16.24■□□□□ 0.19
SFXN3-205ENST00000470252 STAG3Q9UJ98 1225 aa16.24■□□□□ 0.19
SFXN3-205ENST00000470252 IBTKQ9P2D0 1353 aaPredicted RBP16.24■□□□□ 0.19
SFXN3-205ENST00000470252 CDK12Q9NYV4 1490 aaPredicted RBP16.24■□□□□ 0.19
SFXN3-205ENST00000470252 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
SFXN3-205ENST00000470252 NME9Q86XW9 330 aa16.24■□□□□ 0.19
SFXN3-205ENST00000470252 PPP1R9BQ96SB3 815 aa16.24■□□□□ 0.19
SFXN3-205ENST00000470252 KIF24Q5T7B8 1368 aa16.24■□□□□ 0.19
SFXN3-205ENST00000470252 NCLP19338 710 aaKnown RBP16.23■□□□□ 0.19
SFXN3-205ENST00000470252 NUCB2P80303 420 aa16.23■□□□□ 0.19
SFXN3-205ENST00000470252 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
SFXN3-205ENST00000470252 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
SFXN3-205ENST00000470252 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
SFXN3-205ENST00000470252 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
SFXN3-205ENST00000470252 GLIPR1L2Q4G1C9 344 aa16.22■□□□□ 0.19
SFXN3-205ENST00000470252 RRP9O43818 475 aaKnown RBP16.22■□□□□ 0.19
SFXN3-205ENST00000470252 OTUD7AQ8TE49 926 aaPredicted RBP16.22■□□□□ 0.19
SFXN3-205ENST00000470252 CAVIN1Q6NZI2 390 aaKnown RBP16.21■□□□□ 0.19
SFXN3-205ENST00000470252 ANKRD44Q8N8A2 993 aa16.21■□□□□ 0.19
SFXN3-205ENST00000470252 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
SFXN3-205ENST00000470252 APBB1O00213 710 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms