RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
FN1-216ENST00000469569 USP19O94966 1318 aa12.63□□□□□ -0.39
FN1-216ENST00000469569 GCP02774 474 aa12.63□□□□□ -0.39
FN1-216ENST00000469569 RBM6P78332 1123 aaKnown RBP12.63□□□□□ -0.39
FN1-216ENST00000469569 UNC5CLQ8IV45 518 aa12.63□□□□□ -0.39
FN1-216ENST00000469569 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
FN1-216ENST00000469569 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
FN1-216ENST00000469569 CPDO75976 1380 aa12.62□□□□□ -0.39
FN1-216ENST00000469569 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
FN1-216ENST00000469569 USP31Q70CQ4 1352 aa12.61□□□□□ -0.39
FN1-216ENST00000469569 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
FN1-216ENST00000469569 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
FN1-216ENST00000469569 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
FN1-216ENST00000469569 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
FN1-216ENST00000469569 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
FN1-216ENST00000469569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
FN1-216ENST00000469569 SLIT2O94813 1529 aa12.6□□□□□ -0.39
FN1-216ENST00000469569 AKAP12Q02952 1782 aa12.6□□□□□ -0.39
FN1-216ENST00000469569 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
FN1-216ENST00000469569 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
FN1-216ENST00000469569 VPS72Q15906 364 aa12.59□□□□□ -0.39
FN1-216ENST00000469569 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
FN1-216ENST00000469569 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
FN1-216ENST00000469569 KIAA0232Q92628 1395 aa12.58□□□□□ -0.4
FN1-216ENST00000469569 ATRNO75882 1429 aa12.58□□□□□ -0.4
FN1-216ENST00000469569 ZC3H6P61129 1189 aaKnown RBP12.58□□□□□ -0.4
FN1-216ENST00000469569 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
FN1-216ENST00000469569 COG3Q96JB2 828 aa12.58□□□□□ -0.4
FN1-216ENST00000469569 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
FN1-216ENST00000469569 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
FN1-216ENST00000469569 MON2Q7Z3U7 1717 aa12.57□□□□□ -0.4
FN1-216ENST00000469569 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
FN1-216ENST00000469569 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
FN1-216ENST00000469569 EVA1CP58658 441 aa12.57□□□□□ -0.4
FN1-216ENST00000469569 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
FN1-216ENST00000469569 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
FN1-216ENST00000469569 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
FN1-216ENST00000469569 SOCS7O14512 581 aa12.56□□□□□ -0.4
FN1-216ENST00000469569 PYGBP11216 843 aa12.56□□□□□ -0.4
FN1-216ENST00000469569 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
FN1-216ENST00000469569 ABCA3Q99758 1704 aa12.56□□□□□ -0.4
FN1-216ENST00000469569 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
FN1-216ENST00000469569 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.55□□□□□ -0.4
FN1-216ENST00000469569 HAX1O00165 279 aa12.55□□□□□ -0.4
FN1-216ENST00000469569 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
FN1-216ENST00000469569 NME9Q86XW9 330 aa12.55□□□□□ -0.4
FN1-216ENST00000469569 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
FN1-216ENST00000469569 SLIT3O75094 1523 aa12.55□□□□□ -0.4
FN1-216ENST00000469569 NRKQ7Z2Y5 1582 aa12.54□□□□□ -0.4
FN1-216ENST00000469569 PHRF1Q9P1Y6 1649 aaKnown RBP12.54□□□□□ -0.4
FN1-216ENST00000469569 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
FN1-216ENST00000469569 FYB1O15117 783 aa12.53□□□□□ -0.4
FN1-216ENST00000469569 RGL2O15211 777 aa12.53□□□□□ -0.4
FN1-216ENST00000469569 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
FN1-216ENST00000469569 THRAP3Q9Y2W1 955 aaKnown RBP12.53□□□□□ -0.4
FN1-216ENST00000469569 PIK3C2AO00443 1686 aa12.53□□□□□ -0.4
FN1-216ENST00000469569 ABCC6O95255 1503 aa12.52□□□□□ -0.4
FN1-216ENST00000469569 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
FN1-216ENST00000469569 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.41
FN1-216ENST00000469569 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.41
FN1-216ENST00000469569 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
FN1-216ENST00000469569 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
FN1-216ENST00000469569 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
FN1-216ENST00000469569 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
FN1-216ENST00000469569 ZBTB7CA1YPR0 619 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 CHRM1P11229 460 aaPredicted RBP12.5□□□□□ -0.41
FN1-216ENST00000469569 CARD14Q9BXL6 1004 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 PANK3Q9H999 370 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 KIF7Q2M1P5 1343 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 NSD2O96028 1365 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 NSD3Q9BZ95 1437 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 PLCH1Q4KWH8 1693 aa12.5□□□□□ -0.41
FN1-216ENST00000469569 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
FN1-216ENST00000469569 SPATA31A1Q5TZJ5 1347 aa12.49□□□□□ -0.41
FN1-216ENST00000469569 SOX12O15370 315 aa12.49□□□□□ -0.41
FN1-216ENST00000469569 BARGINQ6ZT62 677 aa12.49□□□□□ -0.41
FN1-216ENST00000469569 CDCA7Q9BWT1 371 aaPredicted RBP12.49□□□□□ -0.41
FN1-216ENST00000469569 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
FN1-216ENST00000469569 NFAT5O94916 1531 aa12.48□□□□□ -0.41
FN1-216ENST00000469569 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
FN1-216ENST00000469569 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
FN1-216ENST00000469569 AMPHP49418 695 aa12.48□□□□□ -0.41
FN1-216ENST00000469569 TCP11L2Q8N4U5 519 aa12.48□□□□□ -0.41
FN1-216ENST00000469569 IP6K1Q92551 441 aa12.48□□□□□ -0.41
FN1-216ENST00000469569 BLMP54132 1417 aaPredicted RBP12.47□□□□□ -0.41
FN1-216ENST00000469569 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
FN1-216ENST00000469569 SEPT12Q8IYM1 358 aa12.47□□□□□ -0.41
FN1-216ENST00000469569 RNF25Q96BH1 459 aaPredicted RBP12.47□□□□□ -0.41
FN1-216ENST00000469569 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
FN1-216ENST00000469569 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
FN1-216ENST00000469569 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.41
FN1-216ENST00000469569 CRB1P82279 1406 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 RTL1A6NKG5 1358 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 MYOM1P52179 1685 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 A0A0G2JS52 829 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 MYT1Q01538 1121 aa12.46□□□□□ -0.41
FN1-216ENST00000469569 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
FN1-216ENST00000469569 TOM1L2Q6ZVM7 507 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms