RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ALS2Q96Q42 1657 aa16.97■□□□□ 0.31
TRAF4-208ENST00000469529 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.31
TRAF4-208ENST00000469529 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-208ENST00000469529 AMPHP49418 695 aa16.95■□□□□ 0.3
TRAF4-208ENST00000469529 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
TRAF4-208ENST00000469529 NFAT5O94916 1531 aa16.95■□□□□ 0.3
TRAF4-208ENST00000469529 CPDO75976 1380 aa16.94■□□□□ 0.3
TRAF4-208ENST00000469529 HOXC9P31274 260 aa16.94■□□□□ 0.3
TRAF4-208ENST00000469529 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRAF4-208ENST00000469529 HSP90AB2PQ58FF8 381 aa16.94■□□□□ 0.3
TRAF4-208ENST00000469529 AFF2P51816 1311 aa16.94■□□□□ 0.3
TRAF4-208ENST00000469529 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
TRAF4-208ENST00000469529 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
TRAF4-208ENST00000469529 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
TRAF4-208ENST00000469529 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
TRAF4-208ENST00000469529 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
TRAF4-208ENST00000469529 C8orf37Q96NL8 207 aa16.93■□□□□ 0.3
TRAF4-208ENST00000469529 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
TRAF4-208ENST00000469529 U2AF1L5P0DN76 240 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-208ENST00000469529 U2AF1Q01081 240 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRAF4-208ENST00000469529 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
TRAF4-208ENST00000469529 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
TRAF4-208ENST00000469529 COL22A1Q8NFW1 1626 aaPredicted RBP16.91■□□□□ 0.3
TRAF4-208ENST00000469529 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
TRAF4-208ENST00000469529 PHRF1Q9P1Y6 1649 aaKnown RBP16.89■□□□□ 0.29
TRAF4-208ENST00000469529 SOX12O15370 315 aa16.89■□□□□ 0.29
TRAF4-208ENST00000469529 NGLY1Q96IV0 654 aa16.89■□□□□ 0.29
TRAF4-208ENST00000469529 ABCC6O95255 1503 aa16.88■□□□□ 0.29
TRAF4-208ENST00000469529 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
TRAF4-208ENST00000469529 RXRBP28702 533 aa16.88■□□□□ 0.29
TRAF4-208ENST00000469529 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
TRAF4-208ENST00000469529 RSPH6AQ9H0K4 717 aa16.88■□□□□ 0.29
TRAF4-208ENST00000469529 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
TRAF4-208ENST00000469529 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
TRAF4-208ENST00000469529 KDRP35968 1356 aa16.87■□□□□ 0.29
TRAF4-208ENST00000469529 CABLES1Q8TDN4 633 aa16.86■□□□□ 0.29
TRAF4-208ENST00000469529 EYA1Q99502 592 aa16.86■□□□□ 0.29
TRAF4-208ENST00000469529 PEAK1Q9H792 1746 aa16.86■□□□□ 0.29
TRAF4-208ENST00000469529 APAF1O14727 1248 aa16.85■□□□□ 0.29
TRAF4-208ENST00000469529 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
TRAF4-208ENST00000469529 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
TRAF4-208ENST00000469529 ZC3H6P61129 1189 aaKnown RBP16.84■□□□□ 0.29
TRAF4-208ENST00000469529 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
TRAF4-208ENST00000469529 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
TRAF4-208ENST00000469529 USP21Q9UK80 565 aa16.83■□□□□ 0.28
TRAF4-208ENST00000469529 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
TRAF4-208ENST00000469529 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
TRAF4-208ENST00000469529 FNBP4Q8N3X1 1017 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-208ENST00000469529 NCAPD2Q15021 1401 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 ERBB3P21860 1342 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 NEFMP07197 916 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 SULT6B1Q6IMI4 303 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
TRAF4-208ENST00000469529 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
TRAF4-208ENST00000469529 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-208ENST00000469529 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
TRAF4-208ENST00000469529 ANKRD24Q8TF21 1146 aa16.8■□□□□ 0.28
TRAF4-208ENST00000469529 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
TRAF4-208ENST00000469529 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
TRAF4-208ENST00000469529 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
TRAF4-208ENST00000469529 HMOX1P09601 288 aa16.79■□□□□ 0.28
TRAF4-208ENST00000469529 WDR63Q8IWG1 891 aa16.79■□□□□ 0.28
TRAF4-208ENST00000469529 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
TRAF4-208ENST00000469529 TRPC5Q9UL62 973 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-208ENST00000469529 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
TRAF4-208ENST00000469529 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
TRAF4-208ENST00000469529 NFE2L2Q16236 605 aa16.78■□□□□ 0.28
TRAF4-208ENST00000469529 WWC1Q8IX03 1113 aa16.78■□□□□ 0.28
TRAF4-208ENST00000469529 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
TRAF4-208ENST00000469529 AEBP1Q8IUX7 1158 aa16.77■□□□□ 0.28
TRAF4-208ENST00000469529 TRMT2AQ8IZ69 625 aaKnown RBP16.77■□□□□ 0.28
TRAF4-208ENST00000469529 ATRNO75882 1429 aa16.77■□□□□ 0.27
TRAF4-208ENST00000469529 COL18A1P39060 1754 aa16.77■□□□□ 0.27
TRAF4-208ENST00000469529 BCL9LQ86UU0 1499 aa16.76■□□□□ 0.27
TRAF4-208ENST00000469529 RGS12O14924 1447 aa16.76■□□□□ 0.27
TRAF4-208ENST00000469529 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
TRAF4-208ENST00000469529 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
TRAF4-208ENST00000469529 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
TRAF4-208ENST00000469529 TRIM35Q9UPQ4 493 aa16.75■□□□□ 0.27
TRAF4-208ENST00000469529 IL16Q14005 1332 aa16.74■□□□□ 0.27
TRAF4-208ENST00000469529 RIPK4P57078 832 aa16.74■□□□□ 0.27
TRAF4-208ENST00000469529 LMOD3Q0VAK6 560 aa16.74■□□□□ 0.27
TRAF4-208ENST00000469529 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
TRAF4-208ENST00000469529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.74■□□□□ 0.273e-6■□□□□ 10.9
TRAF4-208ENST00000469529 LTN1O94822 1766 aa16.74■□□□□ 0.27
TRAF4-208ENST00000469529 WDR17Q8IZU2 1322 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 SLIT2O94813 1529 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
TRAF4-208ENST00000469529 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
TRAF4-208ENST00000469529 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
TRAF4-208ENST00000469529 E9PSI1 815 aa16.71■□□□□ 0.27
TRAF4-208ENST00000469529 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms