RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 BRINP3Q76B58 766 aa11.53□□□□□ -0.56
GAPVD1-213ENST00000469498 UBAP1LF5GYI3 381 aa11.52□□□□□ -0.57
GAPVD1-213ENST00000469498 XPCQ01831 940 aaPredicted RBP11.52□□□□□ -0.57
GAPVD1-213ENST00000469498 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-213ENST00000469498 DDX17Q92841 729 aaKnown RBP11.51□□□□□ -0.57
GAPVD1-213ENST00000469498 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
GAPVD1-213ENST00000469498 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-213ENST00000469498 FOXO3O43524 673 aa11.5□□□□□ -0.57
GAPVD1-213ENST00000469498 TOM1O60784 492 aa11.5□□□□□ -0.57
GAPVD1-213ENST00000469498 PIP4K2BP78356 416 aa11.5□□□□□ -0.57
GAPVD1-213ENST00000469498 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
GAPVD1-213ENST00000469498 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 DIEXFQ68CQ4 756 aaKnown RBP11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 KNSTRNQ9Y448 316 aa11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 NPHP3Q7Z494 1330 aa11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-213ENST00000469498 PSME1Q06323 249 aa11.48□□□□□ -0.57
GAPVD1-213ENST00000469498 TNS3Q68CZ2 1445 aa11.48□□□□□ -0.57
GAPVD1-213ENST00000469498 MED1Q15648 1581 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-213ENST00000469498 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
GAPVD1-213ENST00000469498 TTC21BQ7Z4L5 1316 aa11.47□□□□□ -0.57
GAPVD1-213ENST00000469498 PER1O15534 1290 aaPredicted RBP11.47□□□□□ -0.57
GAPVD1-213ENST00000469498 CC2D1BQ5T0F9 858 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-213ENST00000469498 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
GAPVD1-213ENST00000469498 NME9Q86XW9 330 aa11.47□□□□□ -0.57
GAPVD1-213ENST00000469498 OVOS2A0A0J9YW53 1432 aa11.46□□□□□ -0.57
GAPVD1-213ENST00000469498 OVOS2Q6IE36 1432 aa11.46□□□□□ -0.57
GAPVD1-213ENST00000469498 BRD4O60885 1362 aaPredicted RBP11.46□□□□□ -0.57
GAPVD1-213ENST00000469498 NSD2O96028 1365 aa11.46□□□□□ -0.57
GAPVD1-213ENST00000469498 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
GAPVD1-213ENST00000469498 PEAK1Q9H792 1746 aa11.46□□□□□ -0.58
GAPVD1-213ENST00000469498 SLIT3O75094 1523 aa11.45□□□□□ -0.58
GAPVD1-213ENST00000469498 SBNO1A3KN83 1393 aa11.45□□□□□ -0.58
GAPVD1-213ENST00000469498 NUBP1P53384 320 aa11.45□□□□□ -0.58
GAPVD1-213ENST00000469498 GGNBP2Q9H3C7 697 aa11.45□□□□□ -0.58
GAPVD1-213ENST00000469498 NPC1L1Q9UHC9 1359 aa11.44□□□□□ -0.58
GAPVD1-213ENST00000469498 NUTM2GQ5VZR2 741 aa11.44□□□□□ -0.58
GAPVD1-213ENST00000469498 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
GAPVD1-213ENST00000469498 NFAT5O94916 1531 aa11.44□□□□□ -0.58
GAPVD1-213ENST00000469498 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
GAPVD1-213ENST00000469498 PARD3Q8TEW0 1356 aa11.43□□□□□ -0.58
GAPVD1-213ENST00000469498 SOS2Q07890 1332 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-213ENST00000469498 FYB1O15117 783 aa11.43□□□□□ -0.58
GAPVD1-213ENST00000469498 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
GAPVD1-213ENST00000469498 SPATA31A3Q5VYP0 1347 aa11.42□□□□□ -0.58
GAPVD1-213ENST00000469498 ABTB2Q8N961 1025 aa11.42□□□□□ -0.58
GAPVD1-213ENST00000469498 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
GAPVD1-213ENST00000469498 USP31Q70CQ4 1352 aa11.41□□□□□ -0.58
GAPVD1-213ENST00000469498 ANP32CO43423 234 aa11.41□□□□□ -0.58
GAPVD1-213ENST00000469498 COL18A1P39060 1754 aa11.41□□□□□ -0.58
GAPVD1-213ENST00000469498 SOX12O15370 315 aa11.4□□□□□ -0.58
GAPVD1-213ENST00000469498 SEC24BO95487 1268 aa11.4□□□□□ -0.58
GAPVD1-213ENST00000469498 TNNT2P45379 298 aaPredicted RBP11.4□□□□□ -0.58
GAPVD1-213ENST00000469498 NLRP6P59044 892 aa11.4□□□□□ -0.58
GAPVD1-213ENST00000469498 MORC1Q86VD1 984 aa11.4□□□□□ -0.58
GAPVD1-213ENST00000469498 COG3Q96JB2 828 aa11.4□□□□□ -0.58
GAPVD1-213ENST00000469498 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
GAPVD1-213ENST00000469498 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.59
GAPVD1-213ENST00000469498 USP19O94966 1318 aa11.38□□□□□ -0.59
GAPVD1-213ENST00000469498 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
GAPVD1-213ENST00000469498 TSPYL2Q9H2G4 693 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-213ENST00000469498 FAM208AQ9UK61 1670 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-213ENST00000469498 COL14A1Q05707 1796 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-213ENST00000469498 LMO7Q8WWI1 1683 aa11.37□□□□□ -0.59
GAPVD1-213ENST00000469498 NLRP13Q86W25 1043 aa11.37□□□□□ -0.59
GAPVD1-213ENST00000469498 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
GAPVD1-213ENST00000469498 MYBBP1AQ9BQG0 1328 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 NRAPQ86VF7 1730 aa11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 FBLN1P23142 703 aa11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 HSPA1LP34931 641 aa11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 TIE1P35590 1138 aa11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 RALBP1Q15311 655 aa11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 CABLES1Q8TDN4 633 aa11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 WNK3Q9BYP7 1800 aa11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
GAPVD1-213ENST00000469498 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
GAPVD1-213ENST00000469498 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
GAPVD1-213ENST00000469498 PPP2R1AP30153 589 aa11.35□□□□□ -0.59
GAPVD1-213ENST00000469498 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
GAPVD1-213ENST00000469498 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
GAPVD1-213ENST00000469498 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 AATKQ6ZMQ8 1374 aa11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 JCADQ9P266 1359 aa11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 MMRN1Q13201 1228 aa11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 ABCC6O95255 1503 aa11.34□□□□□ -0.59
GAPVD1-213ENST00000469498 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
GAPVD1-213ENST00000469498 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
GAPVD1-213ENST00000469498 LRP6O75581 1613 aa11.33□□□□□ -0.6
GAPVD1-213ENST00000469498 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
GAPVD1-213ENST00000469498 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-213ENST00000469498 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms