RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 NNTQ13423 1086 aa11.23□□□□□ -0.61
XRN1-207ENST00000468894 NBPF20Q3BBV1 942 aa11.23□□□□□ -0.61
XRN1-207ENST00000468894 ESPNB1AK53 854 aa11.22□□□□□ -0.61
XRN1-207ENST00000468894 NR5A1Q13285 461 aa11.22□□□□□ -0.61
XRN1-207ENST00000468894 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
XRN1-207ENST00000468894 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
XRN1-207ENST00000468894 HPS1Q92902 700 aa11.22□□□□□ -0.61
XRN1-207ENST00000468894 DGAT1O75907 488 aa11.21□□□□□ -0.61
XRN1-207ENST00000468894 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
XRN1-207ENST00000468894 AVPP01185 164 aa11.2□□□□□ -0.62
XRN1-207ENST00000468894 MCCD1P59942 119 aaPredicted RBP11.2□□□□□ -0.62
XRN1-207ENST00000468894 ADAMTS19Q8TE59 1207 aa11.2□□□□□ -0.62
XRN1-207ENST00000468894 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
XRN1-207ENST00000468894 ZMYND15Q9H091 742 aa11.2□□□□□ -0.62
XRN1-207ENST00000468894 TRAK2O60296 914 aa11.19□□□□□ -0.62
XRN1-207ENST00000468894 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
XRN1-207ENST00000468894 SOX11P35716 441 aa11.19□□□□□ -0.62
XRN1-207ENST00000468894 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
XRN1-207ENST00000468894 ALG2Q9H553 416 aa11.18□□□□□ -0.62
XRN1-207ENST00000468894 RAB15P59190 212 aa11.17□□□□□ -0.62
XRN1-207ENST00000468894 KLF16Q9BXK1 252 aaPredicted RBP11.17□□□□□ -0.62
XRN1-207ENST00000468894 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
XRN1-207ENST00000468894 LCE2BO14633 110 aa11.16□□□□□ -0.62
XRN1-207ENST00000468894 SEMA3FQ13275 785 aa11.16□□□□□ -0.62
XRN1-207ENST00000468894 SEPT12Q8IYM1 358 aa11.16□□□□□ -0.62
XRN1-207ENST00000468894 TIMP2P16035 220 aa11.15□□□□□ -0.62
XRN1-207ENST00000468894 MYT1Q01538 1121 aa11.15□□□□□ -0.62
XRN1-207ENST00000468894 PPP1R26Q5T8A7 1209 aaPredicted RBP11.15□□□□□ -0.62
XRN1-207ENST00000468894 Q6ZNB5 142 aa11.15□□□□□ -0.62
XRN1-207ENST00000468894 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
XRN1-207ENST00000468894 WDR4P57081 412 aaKnown RBP11.14□□□□□ -0.63
XRN1-207ENST00000468894 ITPKCQ96DU7 683 aa11.14□□□□□ -0.63
XRN1-207ENST00000468894 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
XRN1-207ENST00000468894 CRIPAKQ8N1N5 446 aa11.13□□□□□ -0.63
XRN1-207ENST00000468894 PHTF2Q8N3S3 785 aa11.13□□□□□ -0.63
XRN1-207ENST00000468894 GLMNQ92990 594 aa11.13□□□□□ -0.63
XRN1-207ENST00000468894 ZFAND3Q9H8U3 227 aa11.13□□□□□ -0.63
XRN1-207ENST00000468894 ST8SIA5O15466 376 aa11.12□□□□□ -0.63
XRN1-207ENST00000468894 ZIC2O95409 532 aaPredicted RBP11.12□□□□□ -0.63
XRN1-207ENST00000468894 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
XRN1-207ENST00000468894 DHX9Q08211 1270 aaKnown RBP11.12□□□□□ -0.63
XRN1-207ENST00000468894 HDGFL1Q5TGJ6 251 aa11.12□□□□□ -0.63
XRN1-207ENST00000468894 TMPRSS4Q9NRS4 437 aa11.12□□□□□ -0.63
XRN1-207ENST00000468894 EMILIN1Q9Y6C2 1016 aa11.12□□□□□ -0.63
XRN1-207ENST00000468894 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
XRN1-207ENST00000468894 CTC1Q2NKJ3 1217 aa11.11□□□□□ -0.63
XRN1-207ENST00000468894 RNF20Q5VTR2 975 aa11.11□□□□□ -0.63
XRN1-207ENST00000468894 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
XRN1-207ENST00000468894 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
XRN1-207ENST00000468894 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
XRN1-207ENST00000468894 ZNF784Q8NCA9 323 aaPredicted RBP11.1□□□□□ -0.63
XRN1-207ENST00000468894 UCN2Q96RP3 112 aa11.1□□□□□ -0.63
XRN1-207ENST00000468894 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
XRN1-207ENST00000468894 CAPN5O15484 640 aaPredicted RBP11.09□□□□□ -0.63
XRN1-207ENST00000468894 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
XRN1-207ENST00000468894 AXIN1O15169 862 aa11.08□□□□□ -0.64
XRN1-207ENST00000468894 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
XRN1-207ENST00000468894 CHIC2Q9UKJ5 165 aa11.08□□□□□ -0.64
XRN1-207ENST00000468894 PCDHB11Q9Y5F2 797 aa11.08□□□□□ -0.64
XRN1-207ENST00000468894 LILRA1O75019 489 aa11.07□□□□□ -0.64
XRN1-207ENST00000468894 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
XRN1-207ENST00000468894 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
XRN1-207ENST00000468894 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
XRN1-207ENST00000468894 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
XRN1-207ENST00000468894 CYLDQ9NQC7 956 aa11.06□□□□□ -0.64
XRN1-207ENST00000468894 SCTRP47872 440 aa11.05□□□□□ -0.64
XRN1-207ENST00000468894 CBLBQ13191 982 aa11.05□□□□□ -0.64
XRN1-207ENST00000468894 MEIOBQ8N635 442 aa11.05□□□□□ -0.64
XRN1-207ENST00000468894 CALR3Q96L12 384 aaKnown RBP11.05□□□□□ -0.64
XRN1-207ENST00000468894 CDCA7Q9BWT1 371 aaPredicted RBP11.05□□□□□ -0.64
XRN1-207ENST00000468894 DACH1Q9UI36 760 aa11.05□□□□□ -0.64
XRN1-207ENST00000468894 DOLKQ9UPQ8 538 aa11.05□□□□□ -0.64
XRN1-207ENST00000468894 BMP1P13497 986 aa11.04□□□□□ -0.64
XRN1-207ENST00000468894 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
XRN1-207ENST00000468894 PLPP7Q8NBV4 271 aa11.04□□□□□ -0.64
XRN1-207ENST00000468894 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
XRN1-207ENST00000468894 ADD1P35611 737 aaKnown RBP11.03□□□□□ -0.64
XRN1-207ENST00000468894 Q6ZVU0 165 aa11.03□□□□□ -0.64
XRN1-207ENST00000468894 ARID3CA6NKF2 412 aa11.02□□□□□ -0.65
XRN1-207ENST00000468894 SKIP12755 728 aa11.02□□□□□ -0.65
XRN1-207ENST00000468894 TBC1D9Q6ZT07 1266 aa11.02□□□□□ -0.65
XRN1-207ENST00000468894 TRIM46Q7Z4K8 759 aa11.02□□□□□ -0.65
XRN1-207ENST00000468894 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
XRN1-207ENST00000468894 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
XRN1-207ENST00000468894 MAP7D1Q3KQU3 841 aa11□□□□□ -0.65
XRN1-207ENST00000468894 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
XRN1-207ENST00000468894 USP17L5A8MUK1 530 aa10.99□□□□□ -0.65
XRN1-207ENST00000468894 ADH1AP07327 375 aa10.99□□□□□ -0.65
XRN1-207ENST00000468894 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
XRN1-207ENST00000468894 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
XRN1-207ENST00000468894 ATP9BO43861 1147 aa10.98□□□□□ -0.65
XRN1-207ENST00000468894 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
XRN1-207ENST00000468894 KDF1Q8NAX2 398 aaPredicted RBP10.98□□□□□ -0.65
XRN1-207ENST00000468894 AGBL1Q96MI9 1066 aa10.98□□□□□ -0.65
XRN1-207ENST00000468894 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
XRN1-207ENST00000468894 NCOA4Q13772 614 aa10.97□□□□□ -0.65
XRN1-207ENST00000468894 DEPDC4Q8N2C3 294 aa10.97□□□□□ -0.65
XRN1-207ENST00000468894 PPP1R12CQ9BZL4 782 aa10.97□□□□□ -0.65
XRN1-207ENST00000468894 USP17L3A6NCW0 530 aa10.96□□□□□ -0.65
XRN1-207ENST00000468894 USP17L4A6NCW7 530 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms