RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 NEUROD2Q15784 382 aa24.51■■□□□ 1.51
ABCF3-207ENST00000468892 HSP90AB2PQ58FF8 381 aa24.51■■□□□ 1.51
ABCF3-207ENST00000468892 PEAK1Q9H792 1746 aa24.5■■□□□ 1.51
ABCF3-207ENST00000468892 TMPOP42166 694 aaKnown RBP24.5■■□□□ 1.51
ABCF3-207ENST00000468892 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
ABCF3-207ENST00000468892 USP19O94966 1318 aa24.49■■□□□ 1.51
ABCF3-207ENST00000468892 ARHGEF10O15013 1369 aa24.49■■□□□ 1.51
ABCF3-207ENST00000468892 SLIT3O75094 1523 aa24.48■■□□□ 1.51
ABCF3-207ENST00000468892 HOXC9P31274 260 aa24.48■■□□□ 1.51
ABCF3-207ENST00000468892 BRINP3Q76B58 766 aa24.48■■□□□ 1.51
ABCF3-207ENST00000468892 RRP7AQ9Y3A4 280 aaKnown RBP24.48■■□□□ 1.51
ABCF3-207ENST00000468892 HMOX1P09601 288 aa24.47■■□□□ 1.51
ABCF3-207ENST00000468892 IP6K1Q92551 441 aa24.47■■□□□ 1.51
ABCF3-207ENST00000468892 RCAN3Q9UKA8 241 aa24.47■■□□□ 1.51
ABCF3-207ENST00000468892 NFAT5O94916 1531 aa24.47■■□□□ 1.51
ABCF3-207ENST00000468892 GCP02774 474 aa24.46■■□□□ 1.51
ABCF3-207ENST00000468892 FKBP8Q14318 412 aa24.46■■□□□ 1.51
ABCF3-207ENST00000468892 ERICH6BQ5W0A0 696 aa24.46■■□□□ 1.51
ABCF3-207ENST00000468892 TRMT2AQ8IZ69 625 aaKnown RBP24.46■■□□□ 1.51
ABCF3-207ENST00000468892 ALS2Q96Q42 1657 aa24.46■■□□□ 1.51
ABCF3-207ENST00000468892 LMOD3Q0VAK6 560 aa24.45■■□□□ 1.5
ABCF3-207ENST00000468892 DUSP27Q5VZP5 1158 aa24.45■■□□□ 1.5
ABCF3-207ENST00000468892 TNS3Q68CZ2 1445 aa24.45■■□□□ 1.5
ABCF3-207ENST00000468892 RIPK4P57078 832 aa24.44■■□□□ 1.5
ABCF3-207ENST00000468892 CALD1Q05682 793 aaKnown RBP24.44■■□□□ 1.5
ABCF3-207ENST00000468892 NFE2L2Q16236 605 aa24.44■■□□□ 1.5
ABCF3-207ENST00000468892 MYH16Q9H6N6 1097 aa24.44■■□□□ 1.5
ABCF3-207ENST00000468892 PXDNQ92626 1479 aa24.44■■□□□ 1.5
ABCF3-207ENST00000468892 SULT6B1Q6IMI4 303 aa24.43■■□□□ 1.5
ABCF3-207ENST00000468892 PHRF1Q9P1Y6 1649 aaKnown RBP24.43■■□□□ 1.5
ABCF3-207ENST00000468892 IL16Q14005 1332 aa24.42■■□□□ 1.5
ABCF3-207ENST00000468892 SPATA31A3Q5VYP0 1347 aa24.42■■□□□ 1.5
ABCF3-207ENST00000468892 RGPD1P0DJD0 1748 aa24.41■■□□□ 1.5
ABCF3-207ENST00000468892 RNF123Q5XPI4 1314 aa24.41■■□□□ 1.5
ABCF3-207ENST00000468892 LTN1O94822 1766 aa24.41■■□□□ 1.5
ABCF3-207ENST00000468892 ARHGEF25Q86VW2 580 aa24.41■■□□□ 1.5
ABCF3-207ENST00000468892 IGSF1Q8N6C5 1336 aa24.4■■□□□ 1.5
ABCF3-207ENST00000468892 SOS2Q07890 1332 aaPredicted RBP24.39■■□□□ 1.49
ABCF3-207ENST00000468892 TRIM35Q9UPQ4 493 aa24.38■■□□□ 1.49
ABCF3-207ENST00000468892 DDX17Q92841 729 aaKnown RBP24.37■■□□□ 1.49
ABCF3-207ENST00000468892 PHACTR3Q96KR7 559 aa24.37■■□□□ 1.49
ABCF3-207ENST00000468892 EYA1Q99502 592 aa24.37■■□□□ 1.49
ABCF3-207ENST00000468892 KDRP35968 1356 aa24.37■■□□□ 1.49
ABCF3-207ENST00000468892 ZBTB7CA1YPR0 619 aa24.36■■□□□ 1.49
ABCF3-207ENST00000468892 LTBP4Q8N2S1 1624 aa24.34■■□□□ 1.49
ABCF3-207ENST00000468892 MED1Q15648 1581 aaPredicted RBP24.34■■□□□ 1.49
ABCF3-207ENST00000468892 AEBP1Q8IUX7 1158 aa24.34■■□□□ 1.49
ABCF3-207ENST00000468892 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.33■■□□□ 1.49
ABCF3-207ENST00000468892 LTV1Q96GA3 475 aaPredicted RBP24.33■■□□□ 1.49
ABCF3-207ENST00000468892 SPINK5Q9NQ38 1064 aaPredicted RBP24.33■■□□□ 1.49
ABCF3-207ENST00000468892 CT47B1P0C2W7 299 aaPredicted RBP24.32■■□□□ 1.48
ABCF3-207ENST00000468892 RRP1P56182 461 aaKnown RBP24.31■■□□□ 1.48
ABCF3-207ENST00000468892 GAS2L2Q8NHY3 880 aa24.31■■□□□ 1.48
ABCF3-207ENST00000468892 ABCC6O95255 1503 aa24.31■■□□□ 1.48
ABCF3-207ENST00000468892 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
ABCF3-207ENST00000468892 NHSL1Q5SYE7 1610 aa24.29■■□□□ 1.48
ABCF3-207ENST00000468892 CPDO75976 1380 aa24.28■■□□□ 1.48
ABCF3-207ENST00000468892 ZC3H6P61129 1189 aaKnown RBP24.28■■□□□ 1.48
ABCF3-207ENST00000468892 GNAI1P63096 354 aa24.28■■□□□ 1.48
ABCF3-207ENST00000468892 ANKRD24Q8TF21 1146 aa24.27■■□□□ 1.48
ABCF3-207ENST00000468892 HTATSF1O43719 755 aaKnown RBP24.26■■□□□ 1.47
ABCF3-207ENST00000468892 HAP1P54257 671 aaPredicted RBP24.26■■□□□ 1.47
ABCF3-207ENST00000468892 IFT57Q9NWB7 429 aa24.26■■□□□ 1.47
ABCF3-207ENST00000468892 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
ABCF3-207ENST00000468892 IRX6P78412 446 aaPredicted RBP24.24■■□□□ 1.47
ABCF3-207ENST00000468892 FANCIQ9NVI1 1328 aa24.23■■□□□ 1.47
ABCF3-207ENST00000468892 LRRC59Q96AG4 307 aaKnown RBP24.23■■□□□ 1.47
ABCF3-207ENST00000468892 CRYBG1Q9Y4K1 1723 aa24.23■■□□□ 1.47
ABCF3-207ENST00000468892 TOM1O60784 492 aa24.22■■□□□ 1.47
ABCF3-207ENST00000468892 NBPF6Q5VWK0 638 aa24.22■■□□□ 1.47
ABCF3-207ENST00000468892 CABLES1Q8TDN4 633 aa24.22■■□□□ 1.47
ABCF3-207ENST00000468892 NBPF4Q96M43 638 aa24.22■■□□□ 1.47
ABCF3-207ENST00000468892 PPP4R2Q9NY27 417 aa24.21■■□□□ 1.47
ABCF3-207ENST00000468892 DLG5Q8TDM6 1919 aa24.21■■□□□ 1.47
ABCF3-207ENST00000468892 MTHFSDQ2M296 383 aaKnown RBP24.2■■□□□ 1.46
ABCF3-207ENST00000468892 CFAP44Q96MT7 982 aa24.2■■□□□ 1.46
ABCF3-207ENST00000468892 ERBB3P21860 1342 aa24.2■■□□□ 1.46
ABCF3-207ENST00000468892 AHDC1Q5TGY3 1603 aaPredicted RBP24.2■■□□□ 1.46
ABCF3-207ENST00000468892 NCAPD2Q15021 1401 aa24.19■■□□□ 1.46
ABCF3-207ENST00000468892 AMOTQ4VCS5 1084 aa24.19■■□□□ 1.46
ABCF3-207ENST00000468892 ROBO1Q9Y6N7 1651 aa24.19■■□□□ 1.46
ABCF3-207ENST00000468892 KIAA0232Q92628 1395 aa24.19■■□□□ 1.46
ABCF3-207ENST00000468892 PLEKHO1Q53GL0 409 aaPredicted RBP24.18■■□□□ 1.46
ABCF3-207ENST00000468892 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
ABCF3-207ENST00000468892 ZNF428Q96B54 188 aa24.18■■□□□ 1.46
ABCF3-207ENST00000468892 PRDM11Q9NQV5 511 aa24.18■■□□□ 1.46
ABCF3-207ENST00000468892 AXIN2Q9Y2T1 843 aa24.18■■□□□ 1.46
ABCF3-207ENST00000468892 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
ABCF3-207ENST00000468892 GNAT3A8MTJ3 354 aa24.17■■□□□ 1.46
ABCF3-207ENST00000468892 TSR2Q969E8 191 aaKnown RBP24.17■■□□□ 1.46
ABCF3-207ENST00000468892 PLEKHG2Q9H7P9 1386 aa24.17■■□□□ 1.46
ABCF3-207ENST00000468892 ZNF853P0CG23 659 aa24.16■■□□□ 1.46
ABCF3-207ENST00000468892 CSB-PGBD3P0DP91 1061 aa24.16■■□□□ 1.46
ABCF3-207ENST00000468892 USHBP1Q8N6Y0 703 aa24.16■■□□□ 1.46
ABCF3-207ENST00000468892 FAM208AQ9UK61 1670 aaKnown RBP24.16■■□□□ 1.46
ABCF3-207ENST00000468892 EXOSC9Q06265 439 aaKnown RBP24.16■■□□□ 1.46
ABCF3-207ENST00000468892 CAMTA1Q9Y6Y1 1673 aa24.15■■□□□ 1.46
ABCF3-207ENST00000468892 COL18A1P39060 1754 aa24.15■■□□□ 1.46
ABCF3-207ENST00000468892 RARSP54136 660 aaKnown RBP24.15■■□□□ 1.46
ABCF3-207ENST00000468892 MAP3K5Q99683 1374 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms