RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 RGPD1P0DJD0 1748 aa27.05■■□□□ 1.92
TMEM53-207ENST00000468117 PHF23Q9BUL5 403 aaPredicted RBP27.05■■□□□ 1.92
TMEM53-207ENST00000468117 SPINK5Q9NQ38 1064 aaPredicted RBP27.04■■□□□ 1.92
TMEM53-207ENST00000468117 TMPOP42166 694 aaKnown RBP27.04■■□□□ 1.92
TMEM53-207ENST00000468117 KIF24Q5T7B8 1368 aa27.03■■□□□ 1.92
TMEM53-207ENST00000468117 HOXC9P31274 260 aa27.03■■□□□ 1.92
TMEM53-207ENST00000468117 SLFN5Q08AF3 891 aa27.03■■□□□ 1.92
TMEM53-207ENST00000468117 DUSP27Q5VZP5 1158 aa27.03■■□□□ 1.92
TMEM53-207ENST00000468117 KCNH5Q8NCM2 988 aa27.03■■□□□ 1.92
TMEM53-207ENST00000468117 SLIT3O75094 1523 aa27.03■■□□□ 1.92
TMEM53-207ENST00000468117 CCDC27Q2M243 656 aa27.02■■□□□ 1.92
TMEM53-207ENST00000468117 PXDNQ92626 1479 aa27.02■■□□□ 1.92
TMEM53-207ENST00000468117 NCBP3Q53F19 620 aaKnown RBP27■■□□□ 1.91
TMEM53-207ENST00000468117 PHACTR3Q96KR7 559 aa27■■□□□ 1.91
TMEM53-207ENST00000468117 GCP02774 474 aa27■■□□□ 1.91
TMEM53-207ENST00000468117 NEFMP07197 916 aa27■■□□□ 1.91
TMEM53-207ENST00000468117 AEBP1Q8IUX7 1158 aa27■■□□□ 1.91
TMEM53-207ENST00000468117 USP19O94966 1318 aa27■■□□□ 1.91
TMEM53-207ENST00000468117 SULT6B1Q6IMI4 303 aa26.99■■□□□ 1.91
TMEM53-207ENST00000468117 IRX6P78412 446 aaPredicted RBP26.99■■□□□ 1.91
TMEM53-207ENST00000468117 TRMT2AQ8IZ69 625 aaKnown RBP26.99■■□□□ 1.91
TMEM53-207ENST00000468117 E9PSI1 815 aa26.98■■□□□ 1.91
TMEM53-207ENST00000468117 RTL1A6NKG5 1358 aa26.98■■□□□ 1.91
TMEM53-207ENST00000468117 RIPK4P57078 832 aa26.97■■□□□ 1.91
TMEM53-207ENST00000468117 PHRF1Q9P1Y6 1649 aaKnown RBP26.97■■□□□ 1.91
TMEM53-207ENST00000468117 RCAN3Q9UKA8 241 aa26.97■■□□□ 1.91
TMEM53-207ENST00000468117 MED1Q15648 1581 aaPredicted RBP26.97■■□□□ 1.91
TMEM53-207ENST00000468117 TNS3Q68CZ2 1445 aa26.97■■□□□ 1.91
TMEM53-207ENST00000468117 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
TMEM53-207ENST00000468117 DLG5Q8TDM6 1919 aa26.97■■□□□ 1.91
TMEM53-207ENST00000468117 TRIM35Q9UPQ4 493 aa26.96■■□□□ 1.91
TMEM53-207ENST00000468117 WDR63Q8IWG1 891 aa26.95■■□□□ 1.91
TMEM53-207ENST00000468117 LTBP4Q8N2S1 1624 aa26.95■■□□□ 1.9
TMEM53-207ENST00000468117 ARHGEF10O15013 1369 aa26.94■■□□□ 1.9
TMEM53-207ENST00000468117 IP6K1Q92551 441 aa26.94■■□□□ 1.9
TMEM53-207ENST00000468117 LTV1Q96GA3 475 aaPredicted RBP26.94■■□□□ 1.9
TMEM53-207ENST00000468117 SPATA31A3Q5VYP0 1347 aa26.93■■□□□ 1.9
TMEM53-207ENST00000468117 EYA1Q99502 592 aa26.93■■□□□ 1.9
TMEM53-207ENST00000468117 RNF123Q5XPI4 1314 aa26.92■■□□□ 1.9
TMEM53-207ENST00000468117 NFE2L2Q16236 605 aa26.92■■□□□ 1.9
TMEM53-207ENST00000468117 ARHGEF25Q86VW2 580 aa26.92■■□□□ 1.9
TMEM53-207ENST00000468117 IGSF1Q8N6C5 1336 aa26.91■■□□□ 1.9
TMEM53-207ENST00000468117 CRYBG1Q9Y4K1 1723 aa26.89■■□□□ 1.9
TMEM53-207ENST00000468117 SOS2Q07890 1332 aaPredicted RBP26.89■■□□□ 1.89
TMEM53-207ENST00000468117 RGPD5Q99666 1765 aa26.89■■□□□ 1.89
TMEM53-207ENST00000468117 KDRP35968 1356 aa26.89■■□□□ 1.89
TMEM53-207ENST00000468117 CABLES1Q8TDN4 633 aa26.89■■□□□ 1.89
TMEM53-207ENST00000468117 NHSL1Q5SYE7 1610 aa26.88■■□□□ 1.89
TMEM53-207ENST00000468117 RGPD2P0DJD1 1756 aa26.88■■□□□ 1.89
TMEM53-207ENST00000468117 ZC3H6P61129 1189 aaKnown RBP26.87■■□□□ 1.89
TMEM53-207ENST00000468117 RRP1P56182 461 aaKnown RBP26.83■■□□□ 1.89
TMEM53-207ENST00000468117 MYH16Q9H6N6 1097 aa26.82■■□□□ 1.88
TMEM53-207ENST00000468117 AXIN2Q9Y2T1 843 aa26.82■■□□□ 1.88
TMEM53-207ENST00000468117 USHBP1Q8N6Y0 703 aa26.82■■□□□ 1.88
TMEM53-207ENST00000468117 ROBO1Q9Y6N7 1651 aa26.82■■□□□ 1.88
TMEM53-207ENST00000468117 IL16Q14005 1332 aa26.8■■□□□ 1.88
TMEM53-207ENST00000468117 NBPF6Q5VWK0 638 aa26.8■■□□□ 1.88
TMEM53-207ENST00000468117 NBPF4Q96M43 638 aa26.8■■□□□ 1.88
TMEM53-207ENST00000468117 THUMPD2Q9BTF0 503 aaKnown RBP26.8■■□□□ 1.88
TMEM53-207ENST00000468117 TSR2Q969E8 191 aaKnown RBP26.8■■□□□ 1.88
TMEM53-207ENST00000468117 FAM83GA6ND36 823 aa26.78■■□□□ 1.88
TMEM53-207ENST00000468117 LRRC59Q96AG4 307 aaKnown RBP26.78■■□□□ 1.88
TMEM53-207ENST00000468117 COL18A1P39060 1754 aa26.78■■□□□ 1.88
TMEM53-207ENST00000468117 FANCIQ9NVI1 1328 aa26.78■■□□□ 1.88
TMEM53-207ENST00000468117 LMOD3Q0VAK6 560 aa26.78■■□□□ 1.88
TMEM53-207ENST00000468117 ANKRD24Q8TF21 1146 aa26.78■■□□□ 1.88
TMEM53-207ENST00000468117 MTHFSDQ2M296 383 aaKnown RBP26.77■■□□□ 1.88
TMEM53-207ENST00000468117 DCTN1Q14203 1278 aa26.75■■□□□ 1.87
TMEM53-207ENST00000468117 ABCA3Q99758 1704 aa26.75■■□□□ 1.87
TMEM53-207ENST00000468117 PLIN1O60240 522 aa26.75■■□□□ 1.87
TMEM53-207ENST00000468117 KIAA0232Q92628 1395 aa26.75■■□□□ 1.87
TMEM53-207ENST00000468117 CHRNA2Q15822 529 aa26.73■■□□□ 1.87
TMEM53-207ENST00000468117 CALD1Q05682 793 aaKnown RBP26.73■■□□□ 1.87
TMEM53-207ENST00000468117 ERICH6BQ5W0A0 696 aa26.73■■□□□ 1.87
TMEM53-207ENST00000468117 LAS1LQ9Y4W2 734 aaKnown RBP26.73■■□□□ 1.87
TMEM53-207ENST00000468117 ERBB3P21860 1342 aa26.72■■□□□ 1.87
TMEM53-207ENST00000468117 CPDO75976 1380 aa26.72■■□□□ 1.87
TMEM53-207ENST00000468117 CAMTA1Q9Y6Y1 1673 aa26.71■■□□□ 1.87
TMEM53-207ENST00000468117 GAS2L2Q8NHY3 880 aa26.7■■□□□ 1.87
TMEM53-207ENST00000468117 BCAR3O75815 825 aa26.7■■□□□ 1.86
TMEM53-207ENST00000468117 EXOSC9Q06265 439 aaKnown RBP26.7■■□□□ 1.86
TMEM53-207ENST00000468117 MCM10Q7L590 875 aa26.7■■□□□ 1.86
TMEM53-207ENST00000468117 ABCC6O95255 1503 aa26.69■■□□□ 1.86
TMEM53-207ENST00000468117 AHDC1Q5TGY3 1603 aaPredicted RBP26.69■■□□□ 1.86
TMEM53-207ENST00000468117 NCAPD2Q15021 1401 aa26.69■■□□□ 1.86
TMEM53-207ENST00000468117 HAP1P54257 671 aaPredicted RBP26.68■■□□□ 1.86
TMEM53-207ENST00000468117 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
TMEM53-207ENST00000468117 IFT57Q9NWB7 429 aa26.68■■□□□ 1.86
TMEM53-207ENST00000468117 GNAI1P63096 354 aa26.67■■□□□ 1.86
TMEM53-207ENST00000468117 ZNF853P0CG23 659 aa26.66■■□□□ 1.86
TMEM53-207ENST00000468117 LMO7Q8WWI1 1683 aa26.66■■□□□ 1.86
TMEM53-207ENST00000468117 RARSP54136 660 aaKnown RBP26.65■■□□□ 1.86
TMEM53-207ENST00000468117 CFAP44Q96MT7 982 aa26.65■■□□□ 1.86
TMEM53-207ENST00000468117 PRDM11Q9NQV5 511 aa26.65■■□□□ 1.86
TMEM53-207ENST00000468117 RTF1Q92541 710 aaKnown RBP26.65■■□□□ 1.86
TMEM53-207ENST00000468117 FAM208AQ9UK61 1670 aaKnown RBP26.64■■□□□ 1.86
TMEM53-207ENST00000468117 MBIPQ9NS73 344 aa26.64■■□□□ 1.86
TMEM53-207ENST00000468117 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.63■■□□□ 1.85
TMEM53-207ENST00000468117 NLRP2Q9NX02 1062 aa26.63■■□□□ 1.85
TMEM53-207ENST00000468117 PPP4R2Q9NY27 417 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms