RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TRIM52Q96A61 297 aa8.18□□□□□ -1.1
SMC4-208ENST00000467468 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
SMC4-208ENST00000467468 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
SMC4-208ENST00000467468 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
SMC4-208ENST00000467468 OCSTAMPQ9BR26 566 aa8.17□□□□□ -1.1
SMC4-208ENST00000467468 PCDHB9Q9Y5E1 797 aa8.17□□□□□ -1.1
SMC4-208ENST00000467468 ST8SIA5O15466 376 aa8.16□□□□□ -1.1
SMC4-208ENST00000467468 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
SMC4-208ENST00000467468 UBTFP17480 764 aaKnown RBP8.16□□□□□ -1.1
SMC4-208ENST00000467468 GRM5P41594 1212 aa8.16□□□□□ -1.1
SMC4-208ENST00000467468 GDPD2Q9HCC8 539 aa8.16□□□□□ -1.1
SMC4-208ENST00000467468 ABL2P42684 1182 aa8.15□□□□□ -1.1
SMC4-208ENST00000467468 WDR4P57081 412 aaKnown RBP8.15□□□□□ -1.1
SMC4-208ENST00000467468 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
SMC4-208ENST00000467468 EMILIN1Q9Y6C2 1016 aa8.15□□□□□ -1.1
SMC4-208ENST00000467468 GPR37L1O60883 481 aa8.14□□□□□ -1.11
SMC4-208ENST00000467468 NR3C2P08235 984 aa8.14□□□□□ -1.11
SMC4-208ENST00000467468 EIF4G2P78344 907 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMC4-208ENST00000467468 WASHC4Q2M389 1173 aa8.14□□□□□ -1.11
SMC4-208ENST00000467468 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
SMC4-208ENST00000467468 SEPT12Q8IYM1 358 aa8.14□□□□□ -1.11
SMC4-208ENST00000467468 PGPEP1Q9NXJ5 209 aa8.14□□□□□ -1.11
SMC4-208ENST00000467468 LCE2BO14633 110 aa8.13□□□□□ -1.11
SMC4-208ENST00000467468 ZIC2O95409 532 aaPredicted RBP8.13□□□□□ -1.11
SMC4-208ENST00000467468 TIMP2P16035 220 aa8.12□□□□□ -1.11
SMC4-208ENST00000467468 INTS6LQ5JSJ4 861 aaKnown RBP8.12□□□□□ -1.11
SMC4-208ENST00000467468 RNF20Q5VTR2 975 aa8.12□□□□□ -1.11
SMC4-208ENST00000467468 COG6Q9Y2V7 657 aa8.12□□□□□ -1.11
SMC4-208ENST00000467468 ESPNB1AK53 854 aa8.1□□□□□ -1.11
SMC4-208ENST00000467468 RAB15P59190 212 aa8.1□□□□□ -1.11
SMC4-208ENST00000467468 IRF5Q13568 498 aa8.1□□□□□ -1.11
SMC4-208ENST00000467468 PPP1R26Q5T8A7 1209 aaPredicted RBP8.1□□□□□ -1.11
SMC4-208ENST00000467468 ITPKCQ96DU7 683 aa8.1□□□□□ -1.11
SMC4-208ENST00000467468 SENP2Q9HC62 589 aa8.1□□□□□ -1.11
SMC4-208ENST00000467468 ATP13A2Q9NQ11 1180 aa8.1□□□□□ -1.11
SMC4-208ENST00000467468 UPP2O95045 317 aa8.09□□□□□ -1.11
SMC4-208ENST00000467468 SOX11P35716 441 aa8.09□□□□□ -1.11
SMC4-208ENST00000467468 SCARF1Q14162 830 aa8.09□□□□□ -1.11
SMC4-208ENST00000467468 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
SMC4-208ENST00000467468 VAC14Q08AM6 782 aa8.08□□□□□ -1.12
SMC4-208ENST00000467468 KIFC2Q96AC6 838 aa8.08□□□□□ -1.12
SMC4-208ENST00000467468 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
SMC4-208ENST00000467468 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
SMC4-208ENST00000467468 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
SMC4-208ENST00000467468 GIGYF1O75420 1035 aaPredicted RBP8.06□□□□□ -1.12
SMC4-208ENST00000467468 BMP1P13497 986 aa8.06□□□□□ -1.12
SMC4-208ENST00000467468 SEMA3FQ13275 785 aa8.06□□□□□ -1.12
SMC4-208ENST00000467468 MEIOBQ8N635 442 aa8.06□□□□□ -1.12
SMC4-208ENST00000467468 POM121Q96HA1 1249 aa8.06□□□□□ -1.12
SMC4-208ENST00000467468 DACH1Q9UI36 760 aa8.06□□□□□ -1.12
SMC4-208ENST00000467468 C11orf95C9JLR9 678 aaPredicted RBP8.05□□□□□ -1.12
SMC4-208ENST00000467468 ERVH48-1M5A8F1 160 aa8.05□□□□□ -1.12
SMC4-208ENST00000467468 HOMEZQ8IX15 550 aa8.05□□□□□ -1.12
SMC4-208ENST00000467468 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
SMC4-208ENST00000467468 GMPR2Q9P2T1 348 aaKnown RBP8.05□□□□□ -1.12
SMC4-208ENST00000467468 SLFNL1Q499Z3 407 aa8.04□□□□□ -1.12
SMC4-208ENST00000467468 TRIM46Q7Z4K8 759 aa8.04□□□□□ -1.12
SMC4-208ENST00000467468 TRIM47Q96LD4 638 aa8.04□□□□□ -1.12
SMC4-208ENST00000467468 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
SMC4-208ENST00000467468 CEP126Q9P2H0 1117 aa8.04□□□□□ -1.12
SMC4-208ENST00000467468 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
SMC4-208ENST00000467468 ZNF784Q8NCA9 323 aaPredicted RBP8.03□□□□□ -1.12
SMC4-208ENST00000467468 PCDHB11Q9Y5F2 797 aa8.03□□□□□ -1.12
SMC4-208ENST00000467468 BMP2P12643 396 aa8.02□□□□□ -1.13
SMC4-208ENST00000467468 Q6ZVU0 165 aa8.02□□□□□ -1.13
SMC4-208ENST00000467468 PROSER2Q86WR7 435 aaPredicted RBP8.02□□□□□ -1.13
SMC4-208ENST00000467468 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
SMC4-208ENST00000467468 TMPRSS4Q9NRS4 437 aa8.02□□□□□ -1.13
SMC4-208ENST00000467468 C6orf118Q5T5N4 469 aa8.01□□□□□ -1.13
SMC4-208ENST00000467468 RNF135Q8IUD6 432 aa8.01□□□□□ -1.13
SMC4-208ENST00000467468 ZFP42Q96MM3 310 aa8.01□□□□□ -1.13
SMC4-208ENST00000467468 CYLDQ9NQC7 956 aa8.01□□□□□ -1.13
SMC4-208ENST00000467468 A6NJR5 290 aa8□□□□□ -1.13
SMC4-208ENST00000467468 MYCP01106 439 aaPredicted RBP8□□□□□ -1.13
SMC4-208ENST00000467468 ADH1AP07327 375 aa8□□□□□ -1.13
SMC4-208ENST00000467468 CBLBQ13191 982 aa8□□□□□ -1.13
SMC4-208ENST00000467468 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
SMC4-208ENST00000467468 CLUAP1Q96AJ1 413 aa8□□□□□ -1.13
SMC4-208ENST00000467468 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
SMC4-208ENST00000467468 DOLKQ9UPQ8 538 aa7.99□□□□□ -1.13
SMC4-208ENST00000467468 POTECB2RU33 542 aa7.98□□□□□ -1.13
SMC4-208ENST00000467468 LILRA1O75019 489 aa7.98□□□□□ -1.13
SMC4-208ENST00000467468 CYP2U1Q7Z449 544 aa7.98□□□□□ -1.13
SMC4-208ENST00000467468 SIRT1Q96EB6 747 aa7.98□□□□□ -1.13
SMC4-208ENST00000467468 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
SMC4-208ENST00000467468 RELBQ01201 579 aa7.97□□□□□ -1.13
SMC4-208ENST00000467468 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
SMC4-208ENST00000467468 ATP5J2-PTCD1G3V325 749 aa7.96□□□□□ -1.14
SMC4-208ENST00000467468 SPINT1O43278 529 aa7.96□□□□□ -1.14
SMC4-208ENST00000467468 MAN1A2O60476 641 aa7.96□□□□□ -1.14
SMC4-208ENST00000467468 SNRPBP14678 240 aaKnown RBP7.96□□□□□ -1.14
SMC4-208ENST00000467468 CCDC85AQ96PX6 553 aaPredicted RBP7.96□□□□□ -1.14
SMC4-208ENST00000467468 ALG2Q9H553 416 aa7.96□□□□□ -1.14
SMC4-208ENST00000467468 ADD1P35611 737 aaKnown RBP7.95□□□□□ -1.14
SMC4-208ENST00000467468 PTGIRP43119 386 aa7.95□□□□□ -1.14
SMC4-208ENST00000467468 USP4Q13107 963 aa7.95□□□□□ -1.14
SMC4-208ENST00000467468 PHTF2Q8N3S3 785 aa7.95□□□□□ -1.14
SMC4-208ENST00000467468 AGBL1Q96MI9 1066 aa7.95□□□□□ -1.14
SMC4-208ENST00000467468 POM121CA8CG34 1229 aa7.94□□□□□ -1.14
SMC4-208ENST00000467468 OXLD1Q5BKU9 147 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms