RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 COG3Q96JB2 828 aa12.59□□□□□ -0.39
APOBEC1-202ENST00000467171 POLKQ9UBT6 870 aa12.59□□□□□ -0.39
APOBEC1-202ENST00000467171 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
APOBEC1-202ENST00000467171 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
APOBEC1-202ENST00000467171 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
APOBEC1-202ENST00000467171 IER5LQ5T953 404 aa12.58□□□□□ -0.4
APOBEC1-202ENST00000467171 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
APOBEC1-202ENST00000467171 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
APOBEC1-202ENST00000467171 ADGRL3Q9HAR2 1447 aa12.57□□□□□ -0.4
APOBEC1-202ENST00000467171 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
APOBEC1-202ENST00000467171 CCDC27Q2M243 656 aa12.57□□□□□ -0.4
APOBEC1-202ENST00000467171 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
APOBEC1-202ENST00000467171 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 PYGBP11216 843 aa12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 MON2Q7Z3U7 1717 aa12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 NWD1Q149M9 1564 aa12.56□□□□□ -0.4
APOBEC1-202ENST00000467171 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 SEC24BO95487 1268 aa12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 SLFN5Q08AF3 891 aa12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 GSE1Q14687 1217 aa12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
APOBEC1-202ENST00000467171 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 CHD2O14647 1828 aaKnown RBP12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 E9PSI1 815 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 NGDNQ8NEJ9 315 aaKnown RBP12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 RCAN3Q9UKA8 241 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
APOBEC1-202ENST00000467171 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
APOBEC1-202ENST00000467171 KDM4FA0A1W2PPD8 638 aa12.53□□□□□ -0.4
APOBEC1-202ENST00000467171 FCHSD2O94868 740 aa12.53□□□□□ -0.4
APOBEC1-202ENST00000467171 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
APOBEC1-202ENST00000467171 TCP11L2Q8N4U5 519 aa12.53□□□□□ -0.4
APOBEC1-202ENST00000467171 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
APOBEC1-202ENST00000467171 KIF20BQ96Q89 1820 aa12.53□□□□□ -0.4
APOBEC1-202ENST00000467171 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.4
APOBEC1-202ENST00000467171 IL13P35225 146 aa12.52□□□□□ -0.41
APOBEC1-202ENST00000467171 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
APOBEC1-202ENST00000467171 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.41
APOBEC1-202ENST00000467171 PHF8Q9UPP1 1060 aa12.52□□□□□ -0.41
APOBEC1-202ENST00000467171 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
APOBEC1-202ENST00000467171 FMN2Q9NZ56 1722 aa12.51□□□□□ -0.41
APOBEC1-202ENST00000467171 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
APOBEC1-202ENST00000467171 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
APOBEC1-202ENST00000467171 ITSN1Q15811 1721 aa12.5□□□□□ -0.41
APOBEC1-202ENST00000467171 LRRC7Q96NW7 1537 aa12.49□□□□□ -0.41
APOBEC1-202ENST00000467171 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
APOBEC1-202ENST00000467171 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
APOBEC1-202ENST00000467171 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
APOBEC1-202ENST00000467171 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
APOBEC1-202ENST00000467171 KIF24Q5T7B8 1368 aa12.48□□□□□ -0.41
APOBEC1-202ENST00000467171 FBLN1P23142 703 aa12.48□□□□□ -0.41
APOBEC1-202ENST00000467171 RSPH6AQ9H0K4 717 aa12.48□□□□□ -0.41
APOBEC1-202ENST00000467171 DCCP43146 1447 aa12.47□□□□□ -0.41
APOBEC1-202ENST00000467171 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
APOBEC1-202ENST00000467171 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
APOBEC1-202ENST00000467171 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
APOBEC1-202ENST00000467171 RRS1Q15050 365 aaKnown RBP12.47□□□□□ -0.41
APOBEC1-202ENST00000467171 IL16Q14005 1332 aa12.46□□□□□ -0.41
APOBEC1-202ENST00000467171 C14orf37Q86TY3 774 aa12.46□□□□□ -0.41
APOBEC1-202ENST00000467171 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.42
APOBEC1-202ENST00000467171 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
APOBEC1-202ENST00000467171 NEFMP07197 916 aa12.45□□□□□ -0.42
APOBEC1-202ENST00000467171 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
APOBEC1-202ENST00000467171 ESCO1Q5FWF5 840 aa12.45□□□□□ -0.42
APOBEC1-202ENST00000467171 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
APOBEC1-202ENST00000467171 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
APOBEC1-202ENST00000467171 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
APOBEC1-202ENST00000467171 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
APOBEC1-202ENST00000467171 HSPA2P54652 639 aa12.44□□□□□ -0.42
APOBEC1-202ENST00000467171 NLRP6P59044 892 aa12.44□□□□□ -0.42
APOBEC1-202ENST00000467171 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
APOBEC1-202ENST00000467171 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
APOBEC1-202ENST00000467171 FLT4P35916 1363 aa12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 MAP3K19Q56UN5 1328 aa12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 CT47B1P0C2W7 299 aaPredicted RBP12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 PLCG2P16885 1265 aa12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 ABTB2Q8N961 1025 aa12.43□□□□□ -0.42
APOBEC1-202ENST00000467171 C1orf167Q5SNV9 1468 aa12.42□□□□□ -0.42
APOBEC1-202ENST00000467171 PSME1Q06323 249 aa12.42□□□□□ -0.42
APOBEC1-202ENST00000467171 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
APOBEC1-202ENST00000467171 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
APOBEC1-202ENST00000467171 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms