RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
EDEM3-204ENST00000466392 KCNH5Q8NCM2 988 aa16.45■□□□□ 0.22
EDEM3-204ENST00000466392 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
EDEM3-204ENST00000466392 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
EDEM3-204ENST00000466392 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
EDEM3-204ENST00000466392 ARHGEF25Q86VW2 580 aa16.44■□□□□ 0.22
EDEM3-204ENST00000466392 FBLN1P23142 703 aa16.43■□□□□ 0.22
EDEM3-204ENST00000466392 CARD14Q9BXL6 1004 aa16.43■□□□□ 0.22
EDEM3-204ENST00000466392 WNK3Q9BYP7 1800 aa16.42■□□□□ 0.22
EDEM3-204ENST00000466392 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
EDEM3-204ENST00000466392 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
EDEM3-204ENST00000466392 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
EDEM3-204ENST00000466392 FYB1O15117 783 aa16.4■□□□□ 0.22
EDEM3-204ENST00000466392 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
EDEM3-204ENST00000466392 CRB1P82279 1406 aa16.39■□□□□ 0.21
EDEM3-204ENST00000466392 COG3Q96JB2 828 aa16.39■□□□□ 0.21
EDEM3-204ENST00000466392 EP400Q96L91 3159 aa16.39■□□□□ 0.21
EDEM3-204ENST00000466392 KRT27Q7Z3Y8 459 aa16.38■□□□□ 0.21
EDEM3-204ENST00000466392 PARP4Q9UKK3 1724 aaKnown RBP16.37■□□□□ 0.21
EDEM3-204ENST00000466392 RGPD2P0DJD1 1756 aa16.37■□□□□ 0.21
EDEM3-204ENST00000466392 ABCC6O95255 1503 aa16.37■□□□□ 0.21
EDEM3-204ENST00000466392 TOM1L2Q6ZVM7 507 aa16.37■□□□□ 0.21
EDEM3-204ENST00000466392 WDR17Q8IZU2 1322 aa16.37■□□□□ 0.21
EDEM3-204ENST00000466392 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
EDEM3-204ENST00000466392 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
EDEM3-204ENST00000466392 TCP11L2Q8N4U5 519 aa16.36■□□□□ 0.21
EDEM3-204ENST00000466392 PEAK1Q9H792 1746 aa16.36■□□□□ 0.21
EDEM3-204ENST00000466392 ANKRD26Q9UPS8 1709 aa16.36■□□□□ 0.21
EDEM3-204ENST00000466392 MAP3K19Q56UN5 1328 aa16.35■□□□□ 0.21
EDEM3-204ENST00000466392 RRS1Q15050 365 aaKnown RBP16.34■□□□□ 0.21
EDEM3-204ENST00000466392 BARGINQ6ZT62 677 aa16.34■□□□□ 0.21
EDEM3-204ENST00000466392 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
EDEM3-204ENST00000466392 LTV1Q96GA3 475 aaPredicted RBP16.33■□□□□ 0.2
EDEM3-204ENST00000466392 PANK3Q9H999 370 aa16.33■□□□□ 0.2
EDEM3-204ENST00000466392 ERBB3P21860 1342 aa16.33■□□□□ 0.2
EDEM3-204ENST00000466392 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
EDEM3-204ENST00000466392 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
EDEM3-204ENST00000466392 TNS1Q9HBL0 1735 aaKnown RBP16.31■□□□□ 0.2
EDEM3-204ENST00000466392 FAM208AQ9UK61 1670 aaKnown RBP16.31■□□□□ 0.2
EDEM3-204ENST00000466392 THRAP3Q9Y2W1 955 aaKnown RBP16.31■□□□□ 0.2
EDEM3-204ENST00000466392 BLMP54132 1417 aaPredicted RBP16.3■□□□□ 0.2
EDEM3-204ENST00000466392 HOXC9P31274 260 aa16.3■□□□□ 0.2
EDEM3-204ENST00000466392 IP6K1Q92551 441 aa16.3■□□□□ 0.2
EDEM3-204ENST00000466392 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
EDEM3-204ENST00000466392 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
EDEM3-204ENST00000466392 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
EDEM3-204ENST00000466392 AMPHP49418 695 aa16.29■□□□□ 0.2
EDEM3-204ENST00000466392 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
EDEM3-204ENST00000466392 DISP2A7MBM2 1401 aa16.28■□□□□ 0.2
EDEM3-204ENST00000466392 EMILIN1Q9Y6C2 1016 aa16.28■□□□□ 0.2
EDEM3-204ENST00000466392 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
EDEM3-204ENST00000466392 PDE3BQ13370 1112 aa16.27■□□□□ 0.2
EDEM3-204ENST00000466392 DEFB132Q7Z7B7 95 aa16.27■□□□□ 0.2
EDEM3-204ENST00000466392 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
EDEM3-204ENST00000466392 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
EDEM3-204ENST00000466392 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
EDEM3-204ENST00000466392 RTL1A6NKG5 1358 aa16.26■□□□□ 0.19
EDEM3-204ENST00000466392 DDB1Q16531 1140 aa16.25■□□□□ 0.19
EDEM3-204ENST00000466392 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
EDEM3-204ENST00000466392 TRIM37O94972 964 aa16.24■□□□□ 0.19
EDEM3-204ENST00000466392 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
EDEM3-204ENST00000466392 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
EDEM3-204ENST00000466392 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
EDEM3-204ENST00000466392 FLT4P35916 1363 aa16.23■□□□□ 0.19
EDEM3-204ENST00000466392 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
EDEM3-204ENST00000466392 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
EDEM3-204ENST00000466392 FAM196AQ6ZSG2 479 aa16.22■□□□□ 0.19
EDEM3-204ENST00000466392 MARCH10Q8NA82 808 aaPredicted RBP16.22■□□□□ 0.19
EDEM3-204ENST00000466392 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
EDEM3-204ENST00000466392 OVOS2A0A0G2JMS6 1433 aa16.21■□□□□ 0.19
EDEM3-204ENST00000466392 CNGB1Q14028 1251 aaPredicted RBP16.21■□□□□ 0.19
EDEM3-204ENST00000466392 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
EDEM3-204ENST00000466392 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
EDEM3-204ENST00000466392 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
EDEM3-204ENST00000466392 INSRP06213 1382 aa16.21■□□□□ 0.19
EDEM3-204ENST00000466392 MEGF6O75095 1541 aa16.2■□□□□ 0.18
EDEM3-204ENST00000466392 IL2RBP14784 551 aa16.2■□□□□ 0.18
EDEM3-204ENST00000466392 CDCA7Q9BWT1 371 aaPredicted RBP16.2■□□□□ 0.18
EDEM3-204ENST00000466392 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
EDEM3-204ENST00000466392 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
EDEM3-204ENST00000466392 EXOC5O00471 708 aa16.19■□□□□ 0.18
EDEM3-204ENST00000466392 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
EDEM3-204ENST00000466392 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
EDEM3-204ENST00000466392 NSD2O96028 1365 aa16.18■□□□□ 0.18
EDEM3-204ENST00000466392 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
EDEM3-204ENST00000466392 MORC1Q86VD1 984 aa16.18■□□□□ 0.18
EDEM3-204ENST00000466392 KIF24Q5T7B8 1368 aa16.17■□□□□ 0.18
EDEM3-204ENST00000466392 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
EDEM3-204ENST00000466392 BAG6P46379 1132 aa16.17■□□□□ 0.18
EDEM3-204ENST00000466392 APBA3O96018 575 aa16.16■□□□□ 0.18
EDEM3-204ENST00000466392 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
EDEM3-204ENST00000466392 NHSQ6T4R5 1651 aa16.15■□□□□ 0.18
EDEM3-204ENST00000466392 RREB1Q92766 1687 aa16.15■□□□□ 0.18
EDEM3-204ENST00000466392 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
EDEM3-204ENST00000466392 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
EDEM3-204ENST00000466392 DOT1LQ8TEK3 1739 aa16.14■□□□□ 0.17
EDEM3-204ENST00000466392 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
EDEM3-204ENST00000466392 DDX54Q8TDD1 881 aaKnown RBP16.13■□□□□ 0.17
EDEM3-204ENST00000466392 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
EDEM3-204ENST00000466392 KCNQ2O43526 872 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms