RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
ATG3-203ENST00000465980 PLEKHH1Q9ULM0 1364 aa13.7□□□□□ -0.22
ATG3-203ENST00000465980 MYOM2P54296 1465 aa13.69□□□□□ -0.22
ATG3-203ENST00000465980 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
ATG3-203ENST00000465980 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
ATG3-203ENST00000465980 TECPR2O15040 1411 aa13.69□□□□□ -0.22
ATG3-203ENST00000465980 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
ATG3-203ENST00000465980 PNPLA6Q8IY17 1366 aa13.69□□□□□ -0.22
ATG3-203ENST00000465980 DHX57Q6P158 1386 aaKnown RBP13.68□□□□□ -0.22
ATG3-203ENST00000465980 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
ATG3-203ENST00000465980 ABCC11Q96J66 1382 aa13.67□□□□□ -0.22
ATG3-203ENST00000465980 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
ATG3-203ENST00000465980 CFAP70Q5T0N1 1121 aa13.66□□□□□ -0.22
ATG3-203ENST00000465980 AFF2P51816 1311 aa13.65□□□□□ -0.22
ATG3-203ENST00000465980 XPCQ01831 940 aaPredicted RBP13.65□□□□□ -0.22
ATG3-203ENST00000465980 SAFB2Q14151 953 aaKnown RBP eCLIP13.65□□□□□ -0.22
ATG3-203ENST00000465980 ZNF772Q68DY9 489 aaPredicted RBP13.65□□□□□ -0.22
ATG3-203ENST00000465980 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
ATG3-203ENST00000465980 PCDHGA4Q9Y5G9 962 aa13.65□□□□□ -0.22
ATG3-203ENST00000465980 KIF1AQ12756 1690 aa13.64□□□□□ -0.23
ATG3-203ENST00000465980 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
ATG3-203ENST00000465980 NUDT7P0C024 238 aa13.64□□□□□ -0.23
ATG3-203ENST00000465980 C8orf37Q96NL8 207 aa13.64□□□□□ -0.23
ATG3-203ENST00000465980 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
ATG3-203ENST00000465980 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
ATG3-203ENST00000465980 SOS2Q07890 1332 aaPredicted RBP13.64□□□□□ -0.23
ATG3-203ENST00000465980 PPP1R37O75864 691 aa13.63□□□□□ -0.23
ATG3-203ENST00000465980 PBX2P40425 430 aa13.63□□□□□ -0.23
ATG3-203ENST00000465980 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
ATG3-203ENST00000465980 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
ATG3-203ENST00000465980 PXDNQ92626 1479 aa13.62□□□□□ -0.23
ATG3-203ENST00000465980 FOXO3O43524 673 aa13.62□□□□□ -0.23
ATG3-203ENST00000465980 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
ATG3-203ENST00000465980 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
ATG3-203ENST00000465980 ZEB1P37275 1124 aaPredicted RBP13.61□□□□□ -0.23
ATG3-203ENST00000465980 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
ATG3-203ENST00000465980 PRAM1Q96QH2 718 aa13.61□□□□□ -0.23
ATG3-203ENST00000465980 ADGRB1O14514 1584 aa13.61□□□□□ -0.23
ATG3-203ENST00000465980 LSM11P83369 360 aaKnown RBP eCLIP13.6□□□□□ -0.23
ATG3-203ENST00000465980 RXRBP28702 533 aa13.59□□□□□ -0.23
ATG3-203ENST00000465980 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
ATG3-203ENST00000465980 POGKQ9P215 609 aa13.59□□□□□ -0.23
ATG3-203ENST00000465980 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
ATG3-203ENST00000465980 DLC1Q96QB1 1528 aa13.59□□□□□ -0.23
ATG3-203ENST00000465980 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
ATG3-203ENST00000465980 USP32Q8NFA0 1604 aa13.58□□□□□ -0.24
ATG3-203ENST00000465980 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
ATG3-203ENST00000465980 TRAK1Q9UPV9 953 aa13.58□□□□□ -0.24
ATG3-203ENST00000465980 ADGRB2O60241 1585 aa13.58□□□□□ -0.24
ATG3-203ENST00000465980 EP400Q96L91 3159 aa13.56□□□□□ -0.24
ATG3-203ENST00000465980 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
ATG3-203ENST00000465980 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
ATG3-203ENST00000465980 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
ATG3-203ENST00000465980 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
ATG3-203ENST00000465980 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
ATG3-203ENST00000465980 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
ATG3-203ENST00000465980 RGS12O14924 1447 aa13.55□□□□□ -0.24
ATG3-203ENST00000465980 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
ATG3-203ENST00000465980 FOXK1P85037 733 aa13.54□□□□□ -0.24
ATG3-203ENST00000465980 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
ATG3-203ENST00000465980 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
ATG3-203ENST00000465980 USP21Q9UK80 565 aa13.53□□□□□ -0.24
ATG3-203ENST00000465980 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
ATG3-203ENST00000465980 ITSN1Q15811 1721 aa13.53□□□□□ -0.24
ATG3-203ENST00000465980 KIAA1210Q9ULL0 1709 aa13.53□□□□□ -0.24
ATG3-203ENST00000465980 RBM6P78332 1123 aaKnown RBP13.52□□□□□ -0.25
ATG3-203ENST00000465980 PMFBP1Q8TBY8 1022 aa13.52□□□□□ -0.25
ATG3-203ENST00000465980 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.51□□□□□ -0.25
ATG3-203ENST00000465980 TRPM3Q9HCF6 1732 aaPredicted RBP13.51□□□□□ -0.25
ATG3-203ENST00000465980 TNS3Q68CZ2 1445 aa13.51□□□□□ -0.25
ATG3-203ENST00000465980 ANKARQ7Z5J8 1434 aa13.51□□□□□ -0.25
ATG3-203ENST00000465980 LMOD2Q6P5Q4 547 aa13.51□□□□□ -0.25
ATG3-203ENST00000465980 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
ATG3-203ENST00000465980 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
ATG3-203ENST00000465980 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
ATG3-203ENST00000465980 POTEEQ6S8J3 1075 aa13.5□□□□□ -0.25
ATG3-203ENST00000465980 ATRNO75882 1429 aa13.49□□□□□ -0.25
ATG3-203ENST00000465980 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
ATG3-203ENST00000465980 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
ATG3-203ENST00000465980 PSME1Q06323 249 aa13.49□□□□□ -0.25
ATG3-203ENST00000465980 FNBP4Q8N3X1 1017 aaPredicted RBP13.49□□□□□ -0.25
ATG3-203ENST00000465980 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
ATG3-203ENST00000465980 UPF1Q92900 1129 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATG3-203ENST00000465980 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
ATG3-203ENST00000465980 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
ATG3-203ENST00000465980 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
ATG3-203ENST00000465980 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
ATG3-203ENST00000465980 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
ATG3-203ENST00000465980 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
ATG3-203ENST00000465980 BRWD3Q6RI45 1802 aa13.47□□□□□ -0.25
ATG3-203ENST00000465980 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
ATG3-203ENST00000465980 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.25
ATG3-203ENST00000465980 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.25
ATG3-203ENST00000465980 NWD2Q9ULI1 1742 aa13.46□□□□□ -0.25
ATG3-203ENST00000465980 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.26
ATG3-203ENST00000465980 QRICH2Q9H0J4 1663 aa13.46□□□□□ -0.26
ATG3-203ENST00000465980 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
ATG3-203ENST00000465980 ATP7BP35670 1465 aa13.45□□□□□ -0.26
ATG3-203ENST00000465980 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
ATG3-203ENST00000465980 GLI3P10071 1580 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms