RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 KIFC2Q96AC6 838 aa7.24□□□□□ -1.25
XRN1-205ENST00000465507 SLC10A4Q96EP9 437 aa7.24□□□□□ -1.25
XRN1-205ENST00000465507 COG6Q9Y2V7 657 aa7.24□□□□□ -1.25
XRN1-205ENST00000465507 CAPN5O15484 640 aaPredicted RBP7.23□□□□□ -1.25
XRN1-205ENST00000465507 ZBBXA8MT70 800 aa7.22□□□□□ -1.25
XRN1-205ENST00000465507 TERTO14746 1132 aaKnown RBP7.22□□□□□ -1.25
XRN1-205ENST00000465507 ERFEQ4G0M1 354 aa7.22□□□□□ -1.25
XRN1-205ENST00000465507 GPKOWQ92917 476 aaPredicted RBP eCLIP7.22□□□□□ -1.25
XRN1-205ENST00000465507 OCSTAMPQ9BR26 566 aa7.22□□□□□ -1.25
XRN1-205ENST00000465507 FSHRP23945 695 aa7.21□□□□□ -1.26
XRN1-205ENST00000465507 SH3RF1Q7Z6J0 888 aa7.21□□□□□ -1.26
XRN1-205ENST00000465507 ZC3H4Q9UPT8 1303 aaKnown RBP7.21□□□□□ -1.26
XRN1-205ENST00000465507 NNTQ13423 1086 aa7.2□□□□□ -1.26
XRN1-205ENST00000465507 IRF5Q13568 498 aa7.2□□□□□ -1.26
XRN1-205ENST00000465507 C14orf37Q86TY3 774 aa7.2□□□□□ -1.26
XRN1-205ENST00000465507 WWC1Q8IX03 1113 aa7.2□□□□□ -1.26
XRN1-205ENST00000465507 WIPF1O43516 503 aa7.19□□□□□ -1.26
XRN1-205ENST00000465507 GPR37L1O60883 481 aa7.19□□□□□ -1.26
XRN1-205ENST00000465507 NR1H3Q13133 447 aa7.19□□□□□ -1.26
XRN1-205ENST00000465507 KCTD15Q96SI1 283 aaPredicted RBP7.18□□□□□ -1.26
XRN1-205ENST00000465507 ZNF330Q9Y3S2 320 aaPredicted RBP7.18□□□□□ -1.26
XRN1-205ENST00000465507 POM121CA8CG34 1229 aa7.17□□□□□ -1.26
XRN1-205ENST00000465507 ADH1CP00326 375 aa7.16□□□□□ -1.26
XRN1-205ENST00000465507 TIMP2P16035 220 aa7.16□□□□□ -1.26
XRN1-205ENST00000465507 VEGFBP49765 207 aa7.16□□□□□ -1.26
XRN1-205ENST00000465507 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
XRN1-205ENST00000465507 SEMA3FQ13275 785 aa7.16□□□□□ -1.26
XRN1-205ENST00000465507 PROSER2Q86WR7 435 aaPredicted RBP7.16□□□□□ -1.26
XRN1-205ENST00000465507 MPNDQ8N594 471 aa7.16□□□□□ -1.26
XRN1-205ENST00000465507 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
XRN1-205ENST00000465507 GIGYF1O75420 1035 aaPredicted RBP7.15□□□□□ -1.26
XRN1-205ENST00000465507 EIF4G2P78344 907 aaKnown RBP eCLIP7.15□□□□□ -1.26
XRN1-205ENST00000465507 C1QTNF2Q9BXJ5 285 aa7.15□□□□□ -1.26
XRN1-205ENST00000465507 GPSM3Q9Y4H4 160 aa7.15□□□□□ -1.26
XRN1-205ENST00000465507 SOCS7O14512 581 aa7.14□□□□□ -1.27
XRN1-205ENST00000465507 NR3C2P08235 984 aa7.14□□□□□ -1.27
XRN1-205ENST00000465507 WASHC4Q2M389 1173 aa7.14□□□□□ -1.27
XRN1-205ENST00000465507 MRPL14Q6P1L8 145 aaKnown RBP7.14□□□□□ -1.27
XRN1-205ENST00000465507 TMPRSS4Q9NRS4 437 aa7.14□□□□□ -1.27
XRN1-205ENST00000465507 NXF1Q9UBU9 619 aaKnown RBP7.14□□□□□ -1.27
XRN1-205ENST00000465507 ZNF777Q9ULD5 760 aaPredicted RBP7.14□□□□□ -1.27
XRN1-205ENST00000465507 ZIC2O95409 532 aaPredicted RBP7.13□□□□□ -1.27
XRN1-205ENST00000465507 GRM5P41594 1212 aa7.13□□□□□ -1.27
XRN1-205ENST00000465507 INSM1Q01101 510 aaPredicted RBP7.13□□□□□ -1.27
XRN1-205ENST00000465507 NBPF20Q3BBV1 942 aa7.13□□□□□ -1.27
XRN1-205ENST00000465507 INTS6LQ5JSJ4 861 aaKnown RBP7.13□□□□□ -1.27
XRN1-205ENST00000465507 CDK15Q96Q40 435 aa7.13□□□□□ -1.27
XRN1-205ENST00000465507 PURBQ96QR8 312 aaKnown RBP7.13□□□□□ -1.27
XRN1-205ENST00000465507 KLF16Q9BXK1 252 aaPredicted RBP7.13□□□□□ -1.27
XRN1-205ENST00000465507 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
XRN1-205ENST00000465507 STK17AQ9UEE5 414 aa7.13□□□□□ -1.27
XRN1-205ENST00000465507 SOBPA7XYQ1 873 aa7.12□□□□□ -1.27
XRN1-205ENST00000465507 SLFNL1Q499Z3 407 aa7.12□□□□□ -1.27
XRN1-205ENST00000465507 TRMT44Q8IYL2 757 aaKnown RBP7.12□□□□□ -1.27
XRN1-205ENST00000465507 CCDC116Q8IYX3 515 aa7.12□□□□□ -1.27
XRN1-205ENST00000465507 ITPKCQ96DU7 683 aa7.12□□□□□ -1.27
XRN1-205ENST00000465507 ARID3CA6NKF2 412 aa7.11□□□□□ -1.27
XRN1-205ENST00000465507 GMPRP36959 345 aa7.11□□□□□ -1.27
XRN1-205ENST00000465507 NR5A1Q13285 461 aa7.11□□□□□ -1.27
XRN1-205ENST00000465507 SLC16A10Q8TF71 515 aa7.11□□□□□ -1.27
XRN1-205ENST00000465507 CYLDQ9NQC7 956 aa7.11□□□□□ -1.27
XRN1-205ENST00000465507 ERBB4Q15303 1308 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 H3BM21 787 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 ERVH48-1M5A8F1 160 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 CBLBQ13191 982 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 SCARF1Q14162 830 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
XRN1-205ENST00000465507 HDGFL1Q5TGJ6 251 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
XRN1-205ENST00000465507 CDV3Q9UKY7 258 aaKnown RBP7.1□□□□□ -1.27
XRN1-205ENST00000465507 PCDHB11Q9Y5F2 797 aa7.1□□□□□ -1.27
XRN1-205ENST00000465507 OXLD1Q5BKU9 147 aa7.09□□□□□ -1.27
XRN1-205ENST00000465507 RNF135Q8IUD6 432 aa7.09□□□□□ -1.27
XRN1-205ENST00000465507 CEP126Q9P2H0 1117 aa7.09□□□□□ -1.27
XRN1-205ENST00000465507 MAP4K5Q9Y4K4 846 aa7.09□□□□□ -1.27
XRN1-205ENST00000465507 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
XRN1-205ENST00000465507 TSGA10IPQ3SY00 556 aa7.08□□□□□ -1.28
XRN1-205ENST00000465507 NPAS3Q8IXF0 933 aa7.08□□□□□ -1.28
XRN1-205ENST00000465507 ZNF784Q8NCA9 323 aaPredicted RBP7.08□□□□□ -1.28
XRN1-205ENST00000465507 IRF7Q92985 503 aa7.08□□□□□ -1.28
XRN1-205ENST00000465507 CALR3Q96L12 384 aaKnown RBP7.08□□□□□ -1.28
XRN1-205ENST00000465507 AGBL1Q96MI9 1066 aa7.08□□□□□ -1.28
XRN1-205ENST00000465507 PGPEP1Q9NXJ5 209 aa7.08□□□□□ -1.28
XRN1-205ENST00000465507 TRAK2O60296 914 aa7.07□□□□□ -1.28
XRN1-205ENST00000465507 SKIP12755 728 aa7.07□□□□□ -1.28
XRN1-205ENST00000465507 RELBQ01201 579 aa7.07□□□□□ -1.28
XRN1-205ENST00000465507 DHX9Q08211 1270 aaKnown RBP7.07□□□□□ -1.28
XRN1-205ENST00000465507 GLMNQ92990 594 aa7.07□□□□□ -1.28
XRN1-205ENST00000465507 A6NJR5 290 aa7.06□□□□□ -1.28
XRN1-205ENST00000465507 RNF20Q5VTR2 975 aa7.06□□□□□ -1.28
XRN1-205ENST00000465507 DEPDC4Q8N2C3 294 aa7.06□□□□□ -1.28
XRN1-205ENST00000465507 MEIOBQ8N635 442 aa7.06□□□□□ -1.28
XRN1-205ENST00000465507 ADAMTS19Q8TE59 1207 aa7.06□□□□□ -1.28
XRN1-205ENST00000465507 CCDC85AQ96PX6 553 aaPredicted RBP7.06□□□□□ -1.28
XRN1-205ENST00000465507 CDCA7Q9BWT1 371 aaPredicted RBP7.06□□□□□ -1.28
XRN1-205ENST00000465507 TIMELESSQ9UNS1 1208 aa7.06□□□□□ -1.28
XRN1-205ENST00000465507 DOLKQ9UPQ8 538 aa7.06□□□□□ -1.28
XRN1-205ENST00000465507 EMILIN1Q9Y6C2 1016 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms