RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-223ENST00000465143 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
ITSN1-223ENST00000465143 UNC5CLQ8IV45 518 aa10.66□□□□□ -0.7
ITSN1-223ENST00000465143 CCDC9Q9Y3X0 531 aaKnown RBP10.66□□□□□ -0.7
ITSN1-223ENST00000465143 FAM83GA6ND36 823 aa10.65□□□□□ -0.7
ITSN1-223ENST00000465143 TMF1P82094 1093 aa10.65□□□□□ -0.7
ITSN1-223ENST00000465143 HDGFL2Q7Z4V5 671 aaPredicted RBP10.65□□□□□ -0.7
ITSN1-223ENST00000465143 NLRP13Q86W25 1043 aa10.65□□□□□ -0.7
ITSN1-223ENST00000465143 PRDM11Q9NQV5 511 aa10.65□□□□□ -0.7
ITSN1-223ENST00000465143 USP32Q8NFA0 1604 aa10.65□□□□□ -0.7
ITSN1-223ENST00000465143 NLRP6P59044 892 aa10.64□□□□□ -0.71
ITSN1-223ENST00000465143 ZC3H6P61129 1189 aaKnown RBP10.64□□□□□ -0.71
ITSN1-223ENST00000465143 TESK2Q96S53 571 aa10.64□□□□□ -0.71
ITSN1-223ENST00000465143 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
ITSN1-223ENST00000465143 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
ITSN1-223ENST00000465143 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
ITSN1-223ENST00000465143 BTG4Q9NY30 223 aa10.63□□□□□ -0.71
ITSN1-223ENST00000465143 TERF2IPQ9NYB0 399 aa10.63□□□□□ -0.71
ITSN1-223ENST00000465143 USP6P35125 1406 aa10.62□□□□□ -0.71
ITSN1-223ENST00000465143 ZBTB7CA1YPR0 619 aa10.62□□□□□ -0.71
ITSN1-223ENST00000465143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.62□□□□□ -0.71
ITSN1-223ENST00000465143 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
ITSN1-223ENST00000465143 SLC12A5Q9H2X9 1139 aa10.62□□□□□ -0.71
ITSN1-223ENST00000465143 SCUBE2Q9NQ36 999 aa10.62□□□□□ -0.71
ITSN1-223ENST00000465143 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
ITSN1-223ENST00000465143 KTN1Q86UP2 1357 aaKnown RBP10.62□□□□□ -0.71
ITSN1-223ENST00000465143 COL22A1Q8NFW1 1626 aaPredicted RBP10.62□□□□□ -0.71
ITSN1-223ENST00000465143 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
ITSN1-223ENST00000465143 TTC21BQ7Z4L5 1316 aa10.61□□□□□ -0.71
ITSN1-223ENST00000465143 CHRNA2Q15822 529 aa10.61□□□□□ -0.71
ITSN1-223ENST00000465143 VPS72Q15906 364 aa10.61□□□□□ -0.71
ITSN1-223ENST00000465143 KIAA0232Q92628 1395 aa10.61□□□□□ -0.71
ITSN1-223ENST00000465143 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 ATRNO75882 1429 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 A0A0G2JS52 829 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 SOX12O15370 315 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 GCP02774 474 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 TIE1P35590 1138 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 EVA1CP58658 441 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 MYT1Q01538 1121 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 POLR3GLQ9BT43 218 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
ITSN1-223ENST00000465143 USP19O94966 1318 aa10.59□□□□□ -0.71
ITSN1-223ENST00000465143 TTC21AQ8NDW8 1320 aa10.59□□□□□ -0.71
ITSN1-223ENST00000465143 SLIT2O94813 1529 aa10.59□□□□□ -0.71
ITSN1-223ENST00000465143 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
ITSN1-223ENST00000465143 KCNH5Q8NCM2 988 aa10.59□□□□□ -0.71
ITSN1-223ENST00000465143 NINLQ9Y2I6 1382 aa10.59□□□□□ -0.71
ITSN1-223ENST00000465143 CDK12Q9NYV4 1490 aaPredicted RBP10.58□□□□□ -0.72
ITSN1-223ENST00000465143 DIEXFQ68CQ4 756 aaKnown RBP10.58□□□□□ -0.72
ITSN1-223ENST00000465143 PLCD3Q8N3E9 789 aa10.58□□□□□ -0.72
ITSN1-223ENST00000465143 CPSF1Q10570 1443 aaKnown RBP10.58□□□□□ -0.72
ITSN1-223ENST00000465143 NME9Q86XW9 330 aa10.57□□□□□ -0.72
ITSN1-223ENST00000465143 RGS12O14924 1447 aa10.57□□□□□ -0.72
ITSN1-223ENST00000465143 SSH2Q76I76 1423 aa10.57□□□□□ -0.72
ITSN1-223ENST00000465143 WASHC2AQ641Q2 1341 aa10.57□□□□□ -0.72
ITSN1-223ENST00000465143 ITSN1Q15811 1721 aa10.56□□□□□ -0.72
ITSN1-223ENST00000465143 A0A1W2PP64 1363 aa10.56□□□□□ -0.72
ITSN1-223ENST00000465143 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
ITSN1-223ENST00000465143 SEPT12Q8IYM1 358 aa10.56□□□□□ -0.72
ITSN1-223ENST00000465143 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
ITSN1-223ENST00000465143 RGPD8O14715 1765 aaPredicted RBP10.56□□□□□ -0.72
ITSN1-223ENST00000465143 KIF7Q2M1P5 1343 aa10.56□□□□□ -0.72
ITSN1-223ENST00000465143 CPDO75976 1380 aa10.55□□□□□ -0.72
ITSN1-223ENST00000465143 TOPAZ1Q8N9V7 1692 aa10.55□□□□□ -0.72
ITSN1-223ENST00000465143 SEC24BO95487 1268 aa10.55□□□□□ -0.72
ITSN1-223ENST00000465143 DDX10Q13206 875 aaKnown RBP10.55□□□□□ -0.72
ITSN1-223ENST00000465143 FAM98CQ17RN3 349 aaKnown RBP10.55□□□□□ -0.72
ITSN1-223ENST00000465143 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
ITSN1-223ENST00000465143 TRPM3Q9HCF6 1732 aaPredicted RBP10.55□□□□□ -0.72
ITSN1-223ENST00000465143 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
ITSN1-223ENST00000465143 EDC4Q6P2E9 1401 aaKnown RBP10.54□□□□□ -0.72
ITSN1-223ENST00000465143 COG3Q96JB2 828 aa10.54□□□□□ -0.72
ITSN1-223ENST00000465143 SPATA31A5Q5VU36 1347 aa10.54□□□□□ -0.72
ITSN1-223ENST00000465143 SPATA31A7Q8IWB4 1347 aa10.54□□□□□ -0.72
ITSN1-223ENST00000465143 ANKRD36BQ8N2N9 1353 aa10.53□□□□□ -0.72
ITSN1-223ENST00000465143 NUBP1P53384 320 aa10.53□□□□□ -0.72
ITSN1-223ENST00000465143 LARP1Q6PKG0 1096 aaKnown RBP10.53□□□□□ -0.72
ITSN1-223ENST00000465143 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
ITSN1-223ENST00000465143 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
ITSN1-223ENST00000465143 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
ITSN1-223ENST00000465143 TOM1L2Q6ZVM7 507 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 ARHGEF25Q86VW2 580 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 TCP11L2Q8N4U5 519 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 CD163L1Q9NR16 1453 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 ALS2Q96Q42 1657 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 AATKQ6ZMQ8 1374 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
ITSN1-223ENST00000465143 ONECUT3O60422 494 aaPredicted RBP10.51□□□□□ -0.73
ITSN1-223ENST00000465143 GGNBP2Q9H3C7 697 aa10.5□□□□□ -0.73
ITSN1-223ENST00000465143 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
ITSN1-223ENST00000465143 BARGINQ6ZT62 677 aa10.49□□□□□ -0.73
ITSN1-223ENST00000465143 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
ITSN1-223ENST00000465143 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
ITSN1-223ENST00000465143 SLIT3O75094 1523 aa10.48□□□□□ -0.73
ITSN1-223ENST00000465143 NRKQ7Z2Y5 1582 aa10.48□□□□□ -0.73
ITSN1-223ENST00000465143 COL14A1Q05707 1796 aaKnown RBP10.48□□□□□ -0.73
ITSN1-223ENST00000465143 FYB1O15117 783 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms