RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
USP25-207ENST00000464435 VASH1Q7L8A9 365 aaPredicted RBP9.54□□□□□ -0.88
USP25-207ENST00000464435 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
USP25-207ENST00000464435 CARD14Q9BXL6 1004 aa9.54□□□□□ -0.88
USP25-207ENST00000464435 SLC10A4Q96EP9 437 aa9.53□□□□□ -0.88
USP25-207ENST00000464435 ADAM32Q8TC27 787 aa9.52□□□□□ -0.89
USP25-207ENST00000464435 ZNF592Q92610 1267 aa9.52□□□□□ -0.89
USP25-207ENST00000464435 KLF16Q9BXK1 252 aaPredicted RBP9.52□□□□□ -0.89
USP25-207ENST00000464435 WDR4P57081 412 aaKnown RBP9.51□□□□□ -0.89
USP25-207ENST00000464435 OCSTAMPQ9BR26 566 aa9.51□□□□□ -0.89
USP25-207ENST00000464435 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
USP25-207ENST00000464435 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
USP25-207ENST00000464435 ZBBXA8MT70 800 aa9.5□□□□□ -0.89
USP25-207ENST00000464435 TIMP2P16035 220 aa9.5□□□□□ -0.89
USP25-207ENST00000464435 MCCD1P59942 119 aaPredicted RBP9.5□□□□□ -0.89
USP25-207ENST00000464435 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
USP25-207ENST00000464435 NBPF20Q3BBV1 942 aa9.5□□□□□ -0.89
USP25-207ENST00000464435 MTMR14Q8NCE2 650 aa9.5□□□□□ -0.89
USP25-207ENST00000464435 TRIM52Q96A61 297 aa9.5□□□□□ -0.89
USP25-207ENST00000464435 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
USP25-207ENST00000464435 FSHRP23945 695 aa9.49□□□□□ -0.89
USP25-207ENST00000464435 CCDC116Q8IYX3 515 aa9.49□□□□□ -0.89
USP25-207ENST00000464435 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
USP25-207ENST00000464435 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
USP25-207ENST00000464435 NR3C2P08235 984 aa9.48□□□□□ -0.89
USP25-207ENST00000464435 GMPRP36959 345 aa9.48□□□□□ -0.89
USP25-207ENST00000464435 CCDC125Q86Z20 511 aa9.48□□□□□ -0.89
USP25-207ENST00000464435 KCTD15Q96SI1 283 aaPredicted RBP9.48□□□□□ -0.89
USP25-207ENST00000464435 LORP23490 312 aaPredicted RBP9.47□□□□□ -0.89
USP25-207ENST00000464435 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
USP25-207ENST00000464435 SNRKQ9NRH2 765 aa9.47□□□□□ -0.89
USP25-207ENST00000464435 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
USP25-207ENST00000464435 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
USP25-207ENST00000464435 ZIC2O95409 532 aaPredicted RBP9.46□□□□□ -0.9
USP25-207ENST00000464435 BMP1P13497 986 aa9.46□□□□□ -0.9
USP25-207ENST00000464435 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.9
USP25-207ENST00000464435 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
USP25-207ENST00000464435 NR1H3Q13133 447 aa9.45□□□□□ -0.9
USP25-207ENST00000464435 SCARF1Q14162 830 aa9.45□□□□□ -0.9
USP25-207ENST00000464435 TRIM46Q7Z4K8 759 aa9.45□□□□□ -0.9
USP25-207ENST00000464435 ITPKCQ96DU7 683 aa9.45□□□□□ -0.9
USP25-207ENST00000464435 MRPL14Q6P1L8 145 aaKnown RBP9.44□□□□□ -0.9
USP25-207ENST00000464435 LOC100996750A0A140TA64 210 aa9.43□□□□□ -0.9
USP25-207ENST00000464435 ESPNB1AK53 854 aa9.43□□□□□ -0.9
USP25-207ENST00000464435 FBXO45P0C2W1 286 aa9.43□□□□□ -0.9
USP25-207ENST00000464435 VEGFBP49765 207 aa9.43□□□□□ -0.9
USP25-207ENST00000464435 PPP1R26Q5T8A7 1209 aaPredicted RBP9.43□□□□□ -0.9
USP25-207ENST00000464435 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
USP25-207ENST00000464435 KRTAP4-6Q9BYQ5 205 aa9.43□□□□□ -0.9
USP25-207ENST00000464435 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
USP25-207ENST00000464435 UPP2O95045 317 aa9.42□□□□□ -0.9
USP25-207ENST00000464435 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
USP25-207ENST00000464435 MEIOBQ8N635 442 aa9.42□□□□□ -0.9
USP25-207ENST00000464435 IRF7Q92985 503 aa9.42□□□□□ -0.9
USP25-207ENST00000464435 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
USP25-207ENST00000464435 SUPT5HO00267 1087 aaKnown RBP9.4□□□□□ -0.9
USP25-207ENST00000464435 GPR37L1O60883 481 aa9.4□□□□□ -0.9
USP25-207ENST00000464435 RNF20Q5VTR2 975 aa9.4□□□□□ -0.9
USP25-207ENST00000464435 Q6ZVU0 165 aa9.4□□□□□ -0.9
USP25-207ENST00000464435 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
USP25-207ENST00000464435 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
USP25-207ENST00000464435 ERBB4Q15303 1308 aa9.39□□□□□ -0.91
USP25-207ENST00000464435 H3BM21 787 aa9.39□□□□□ -0.91
USP25-207ENST00000464435 PCDHB9Q9Y5E1 797 aa9.39□□□□□ -0.91
USP25-207ENST00000464435 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
USP25-207ENST00000464435 MCM6Q14566 821 aa9.36□□□□□ -0.91
USP25-207ENST00000464435 PURBQ96QR8 312 aaKnown RBP9.36□□□□□ -0.91
USP25-207ENST00000464435 TBC1D2BQ9UPU7 963 aa9.36□□□□□ -0.91
USP25-207ENST00000464435 FLIIQ13045 1269 aa9.35□□□□□ -0.91
USP25-207ENST00000464435 WASHC4Q2M389 1173 aa9.35□□□□□ -0.91
USP25-207ENST00000464435 ERVH48-1M5A8F1 160 aa9.34□□□□□ -0.91
USP25-207ENST00000464435 BMP2P12643 396 aa9.34□□□□□ -0.91
USP25-207ENST00000464435 EIF4G2P78344 907 aaKnown RBP eCLIP9.34□□□□□ -0.91
USP25-207ENST00000464435 ZMYND15Q9H091 742 aa9.34□□□□□ -0.91
USP25-207ENST00000464435 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
USP25-207ENST00000464435 SPINT1O43278 529 aa9.31□□□□□ -0.92
USP25-207ENST00000464435 LILRA1O75019 489 aa9.31□□□□□ -0.92
USP25-207ENST00000464435 SOX11P35716 441 aa9.31□□□□□ -0.92
USP25-207ENST00000464435 CBLBQ13191 982 aa9.31□□□□□ -0.92
USP25-207ENST00000464435 IRF5Q13568 498 aa9.31□□□□□ -0.92
USP25-207ENST00000464435 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
USP25-207ENST00000464435 ZNF784Q8NCA9 323 aaPredicted RBP9.31□□□□□ -0.92
USP25-207ENST00000464435 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
USP25-207ENST00000464435 ADH1AP07327 375 aa9.3□□□□□ -0.92
USP25-207ENST00000464435 WWC1Q8IX03 1113 aa9.3□□□□□ -0.92
USP25-207ENST00000464435 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
USP25-207ENST00000464435 TMPRSS4Q9NRS4 437 aa9.3□□□□□ -0.92
USP25-207ENST00000464435 MAN1A2O60476 641 aa9.29□□□□□ -0.92
USP25-207ENST00000464435 RAB15P59190 212 aa9.29□□□□□ -0.92
USP25-207ENST00000464435 CEP126Q9P2H0 1117 aa9.29□□□□□ -0.92
USP25-207ENST00000464435 ERVK-9P63128 1117 aa9.28□□□□□ -0.92
USP25-207ENST00000464435 SUZ12Q15022 739 aaKnown RBP9.28□□□□□ -0.92
USP25-207ENST00000464435 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
USP25-207ENST00000464435 SOBPA7XYQ1 873 aa9.27□□□□□ -0.93
USP25-207ENST00000464435 ABL2P42684 1182 aa9.27□□□□□ -0.93
USP25-207ENST00000464435 PTGIRP43119 386 aa9.27□□□□□ -0.93
USP25-207ENST00000464435 CC2D2BQ6DHV5 1058 aa9.27□□□□□ -0.93
USP25-207ENST00000464435 CLUAP1Q96AJ1 413 aa9.27□□□□□ -0.93
USP25-207ENST00000464435 COG6Q9Y2V7 657 aa9.27□□□□□ -0.93
USP25-207ENST00000464435 RAD21O60216 631 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms