RNA–Protein interactions for RNA: ENST00000463533.1

ANKRD28-208, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-208ENST00000463533 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
ANKRD28-208ENST00000463533 PRR36Q9H6K5 1346 aa11.75□□□□□ -0.53
ANKRD28-208ENST00000463533 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
ANKRD28-208ENST00000463533 PIP4K2BP78356 416 aa11.74□□□□□ -0.53
ANKRD28-208ENST00000463533 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
ANKRD28-208ENST00000463533 ORAI2Q96SN7 254 aa11.74□□□□□ -0.53
ANKRD28-208ENST00000463533 ESCO1Q5FWF5 840 aa11.73□□□□□ -0.53
ANKRD28-208ENST00000463533 POLR3GLQ9BT43 218 aa11.73□□□□□ -0.53
ANKRD28-208ENST00000463533 ITSN1Q15811 1721 aa11.72□□□□□ -0.53
ANKRD28-208ENST00000463533 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
ANKRD28-208ENST00000463533 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
ANKRD28-208ENST00000463533 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.53
ANKRD28-208ENST00000463533 ROBO1Q9Y6N7 1651 aa11.71□□□□□ -0.53
ANKRD28-208ENST00000463533 ATP7BP35670 1465 aa11.71□□□□□ -0.53
ANKRD28-208ENST00000463533 TMEM92Q6UXU6 159 aa11.71□□□□□ -0.53
ANKRD28-208ENST00000463533 PMFBP1Q8TBY8 1022 aa11.71□□□□□ -0.53
ANKRD28-208ENST00000463533 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
ANKRD28-208ENST00000463533 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
ANKRD28-208ENST00000463533 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
ANKRD28-208ENST00000463533 CABP1Q9NZU7 370 aa11.7□□□□□ -0.54
ANKRD28-208ENST00000463533 PPIP5K1Q6PFW1 1433 aa11.69□□□□□ -0.54
ANKRD28-208ENST00000463533 DDX17Q92841 729 aaKnown RBP11.69□□□□□ -0.54
ANKRD28-208ENST00000463533 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
ANKRD28-208ENST00000463533 SLC12A5Q9H2X9 1139 aa11.69□□□□□ -0.54
ANKRD28-208ENST00000463533 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
ANKRD28-208ENST00000463533 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
ANKRD28-208ENST00000463533 KIF7Q2M1P5 1343 aa11.68□□□□□ -0.54
ANKRD28-208ENST00000463533 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
ANKRD28-208ENST00000463533 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
ANKRD28-208ENST00000463533 MYOM1P52179 1685 aa11.68□□□□□ -0.54
ANKRD28-208ENST00000463533 PLEKHG3A1L390 1219 aa11.67□□□□□ -0.54
ANKRD28-208ENST00000463533 FOXO3O43524 673 aa11.67□□□□□ -0.54
ANKRD28-208ENST00000463533 XPCQ01831 940 aaPredicted RBP11.67□□□□□ -0.54
ANKRD28-208ENST00000463533 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
ANKRD28-208ENST00000463533 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
ANKRD28-208ENST00000463533 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
ANKRD28-208ENST00000463533 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
ANKRD28-208ENST00000463533 ACEP12821 1306 aa11.66□□□□□ -0.54
ANKRD28-208ENST00000463533 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
ANKRD28-208ENST00000463533 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
ANKRD28-208ENST00000463533 NHSL1Q5SYE7 1610 aa11.65□□□□□ -0.54
ANKRD28-208ENST00000463533 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
ANKRD28-208ENST00000463533 PSME1Q06323 249 aa11.65□□□□□ -0.54
ANKRD28-208ENST00000463533 ST18O60284 1047 aa11.64□□□□□ -0.55
ANKRD28-208ENST00000463533 KRT28Q7Z3Y7 464 aa11.64□□□□□ -0.55
ANKRD28-208ENST00000463533 FBXO41Q8TF61 875 aa11.64□□□□□ -0.55
ANKRD28-208ENST00000463533 CD163L1Q9NR16 1453 aa11.63□□□□□ -0.55
ANKRD28-208ENST00000463533 POLR3AO14802 1390 aaPredicted RBP11.63□□□□□ -0.55
ANKRD28-208ENST00000463533 AHDC1Q5TGY3 1603 aaPredicted RBP11.63□□□□□ -0.55
ANKRD28-208ENST00000463533 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
ANKRD28-208ENST00000463533 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
ANKRD28-208ENST00000463533 KIF3CO14782 793 aa11.62□□□□□ -0.55
ANKRD28-208ENST00000463533 HDGFL2Q7Z4V5 671 aaPredicted RBP11.62□□□□□ -0.55
ANKRD28-208ENST00000463533 KTN1Q86UP2 1357 aaKnown RBP11.62□□□□□ -0.55
ANKRD28-208ENST00000463533 NINLQ9Y2I6 1382 aa11.62□□□□□ -0.55
ANKRD28-208ENST00000463533 PXDNQ92626 1479 aa11.62□□□□□ -0.55
ANKRD28-208ENST00000463533 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 C2orf72A6NCS6 295 aa11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 HSPA1LP34931 641 aa11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 TMC2Q8TDI7 906 aa11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 PANK3Q9H999 370 aa11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
ANKRD28-208ENST00000463533 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 POTEMA6NI47 508 aa11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 DOK7Q18PE1 504 aa11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 USP6P35125 1406 aa11.6□□□□□ -0.55
ANKRD28-208ENST00000463533 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
ANKRD28-208ENST00000463533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
ANKRD28-208ENST00000463533 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.55
ANKRD28-208ENST00000463533 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
ANKRD28-208ENST00000463533 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.56
ANKRD28-208ENST00000463533 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
ANKRD28-208ENST00000463533 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
ANKRD28-208ENST00000463533 ALS2Q96Q42 1657 aa11.58□□□□□ -0.56
ANKRD28-208ENST00000463533 TTC21BQ7Z4L5 1316 aa11.58□□□□□ -0.56
ANKRD28-208ENST00000463533 SBNO1A3KN83 1393 aa11.57□□□□□ -0.56
ANKRD28-208ENST00000463533 LRRC59Q96AG4 307 aaKnown RBP11.57□□□□□ -0.56
ANKRD28-208ENST00000463533 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
ANKRD28-208ENST00000463533 NSD3Q9BZ95 1437 aa11.57□□□□□ -0.56
ANKRD28-208ENST00000463533 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
ANKRD28-208ENST00000463533 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
ANKRD28-208ENST00000463533 TNS3Q68CZ2 1445 aa11.56□□□□□ -0.56
ANKRD28-208ENST00000463533 EDC4Q6P2E9 1401 aaKnown RBP11.56□□□□□ -0.56
ANKRD28-208ENST00000463533 NME9Q86XW9 330 aa11.56□□□□□ -0.56
ANKRD28-208ENST00000463533 ZNF710Q8N1W2 664 aa11.56□□□□□ -0.56
ANKRD28-208ENST00000463533 PIK3C2AO00443 1686 aa11.55□□□□□ -0.56
ANKRD28-208ENST00000463533 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
ANKRD28-208ENST00000463533 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
ANKRD28-208ENST00000463533 BRD4O60885 1362 aaPredicted RBP11.54□□□□□ -0.56
ANKRD28-208ENST00000463533 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
ANKRD28-208ENST00000463533 MARF1Q9Y4F3 1742 aaKnown RBP11.54□□□□□ -0.56
ANKRD28-208ENST00000463533 TTC21AQ8NDW8 1320 aa11.54□□□□□ -0.56
ANKRD28-208ENST00000463533 SHPRHQ149N8 1683 aa11.53□□□□□ -0.56
ANKRD28-208ENST00000463533 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms