RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 BCL2L13Q9BXK5 485 aa9.59□□□□□ -0.87
NPHP1-209ENST00000461707 ANKRD36CQ5JPF3 1778 aa9.59□□□□□ -0.87
NPHP1-209ENST00000461707 VGFO15240 615 aaPredicted RBP9.59□□□□□ -0.87
NPHP1-209ENST00000461707 MYH15Q9Y2K3 1946 aa9.59□□□□□ -0.87
NPHP1-209ENST00000461707 LRP6O75581 1613 aa9.59□□□□□ -0.87
NPHP1-209ENST00000461707 FYB1O15117 783 aa9.58□□□□□ -0.88
NPHP1-209ENST00000461707 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
NPHP1-209ENST00000461707 TCP11L2Q8N4U5 519 aa9.58□□□□□ -0.88
NPHP1-209ENST00000461707 MS4A1P11836 297 aa9.58□□□□□ -0.88
NPHP1-209ENST00000461707 PANK1Q8TE04 598 aa9.58□□□□□ -0.88
NPHP1-209ENST00000461707 PLEKHG3A1L390 1219 aa9.57□□□□□ -0.88
NPHP1-209ENST00000461707 IGHDP01880 384 aa9.57□□□□□ -0.88
NPHP1-209ENST00000461707 NBR1Q14596 966 aa9.57□□□□□ -0.88
NPHP1-209ENST00000461707 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
NPHP1-209ENST00000461707 ATP10DQ9P241 1426 aa9.57□□□□□ -0.88
NPHP1-209ENST00000461707 BACH2Q9BYV9 841 aa9.57□□□□□ -0.88
NPHP1-209ENST00000461707 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
NPHP1-209ENST00000461707 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
NPHP1-209ENST00000461707 SRPK2P78362 688 aaKnown RBP9.57□□□□□ -0.88
NPHP1-209ENST00000461707 PXDNQ92626 1479 aa9.56□□□□□ -0.88
NPHP1-209ENST00000461707 HEG1Q9ULI3 1381 aa9.56□□□□□ -0.88
NPHP1-209ENST00000461707 IL17RAQ96F46 866 aa9.56□□□□□ -0.88
NPHP1-209ENST00000461707 NOP58Q9Y2X3 529 aaKnown RBP9.56□□□□□ -0.88
NPHP1-209ENST00000461707 AK9Q5TCS8 1911 aa9.56□□□□□ -0.88
NPHP1-209ENST00000461707 RLBP1P12271 317 aa9.56□□□□□ -0.88
NPHP1-209ENST00000461707 DCCP43146 1447 aa9.56□□□□□ -0.88
NPHP1-209ENST00000461707 CT47B1P0C2W7 299 aaPredicted RBP9.55□□□□□ -0.88
NPHP1-209ENST00000461707 C8orf34Q49A92 452 aa9.55□□□□□ -0.88
NPHP1-209ENST00000461707 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
NPHP1-209ENST00000461707 KIAA1551Q9HCM1 1747 aa9.55□□□□□ -0.88
NPHP1-209ENST00000461707 EVC2Q86UK5 1308 aa9.55□□□□□ -0.88
NPHP1-209ENST00000461707 TMEM94Q12767 1356 aa9.55□□□□□ -0.88
NPHP1-209ENST00000461707 COL5A3P25940 1745 aaPredicted RBP9.55□□□□□ -0.88
NPHP1-209ENST00000461707 IPO9Q96P70 1041 aaKnown RBP9.55□□□□□ -0.88
NPHP1-209ENST00000461707 COG6Q9Y2V7 657 aa9.55□□□□□ -0.88
NPHP1-209ENST00000461707 AAMPQ13685 434 aa9.54□□□□□ -0.88
NPHP1-209ENST00000461707 FRAT1Q92837 279 aaPredicted RBP9.54□□□□□ -0.88
NPHP1-209ENST00000461707 TSR2Q969E8 191 aaKnown RBP9.54□□□□□ -0.88
NPHP1-209ENST00000461707 CABP1Q9NZU7 370 aa9.54□□□□□ -0.88
NPHP1-209ENST00000461707 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
NPHP1-209ENST00000461707 ARHGEF10O15013 1369 aa9.54□□□□□ -0.88
NPHP1-209ENST00000461707 TCERG1O14776 1098 aaKnown RBP9.54□□□□□ -0.88
NPHP1-209ENST00000461707 U2AF1L5P0DN76 240 aaPredicted RBP9.54□□□□□ -0.88
NPHP1-209ENST00000461707 IL13P35225 146 aa9.54□□□□□ -0.88
NPHP1-209ENST00000461707 SLC4A3P48751 1232 aa9.54□□□□□ -0.88
NPHP1-209ENST00000461707 U2AF1Q01081 240 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPHP1-209ENST00000461707 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
NPHP1-209ENST00000461707 E9PSI1 815 aa9.53□□□□□ -0.88
NPHP1-209ENST00000461707 RGS3P49796 1198 aa9.53□□□□□ -0.88
NPHP1-209ENST00000461707 BCORQ6W2J9 1755 aa9.53□□□□□ -0.88
NPHP1-209ENST00000461707 DDIT3P35638 169 aa9.53□□□□□ -0.88
NPHP1-209ENST00000461707 CLUAP1Q96AJ1 413 aa9.53□□□□□ -0.88
NPHP1-209ENST00000461707 RUNDC1Q96C34 613 aa9.53□□□□□ -0.88
NPHP1-209ENST00000461707 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
NPHP1-209ENST00000461707 PDE3AQ14432 1141 aa9.52□□□□□ -0.88
NPHP1-209ENST00000461707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.52□□□□□ -0.88
NPHP1-209ENST00000461707 LRP5O75197 1615 aa9.52□□□□□ -0.89
NPHP1-209ENST00000461707 ITGB4P16144 1822 aa9.52□□□□□ -0.89
NPHP1-209ENST00000461707 MYT1Q01538 1121 aa9.52□□□□□ -0.89
NPHP1-209ENST00000461707 ADGRL3Q9HAR2 1447 aa9.52□□□□□ -0.89
NPHP1-209ENST00000461707 U2SURPO15042 1029 aaKnown RBP9.52□□□□□ -0.89
NPHP1-209ENST00000461707 POGKQ9P215 609 aa9.52□□□□□ -0.89
NPHP1-209ENST00000461707 RARSP54136 660 aaKnown RBP9.51□□□□□ -0.89
NPHP1-209ENST00000461707 SPEF2Q9C093 1822 aa9.51□□□□□ -0.89
NPHP1-209ENST00000461707 MSH6P52701 1360 aa9.5□□□□□ -0.89
NPHP1-209ENST00000461707 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
NPHP1-209ENST00000461707 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
NPHP1-209ENST00000461707 ANP32AP39687 249 aaKnown RBP9.5□□□□□ -0.89
NPHP1-209ENST00000461707 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
NPHP1-209ENST00000461707 ZNF646O15015 1829 aaPredicted RBP9.5□□□□□ -0.89
NPHP1-209ENST00000461707 LAS1LQ9Y4W2 734 aaKnown RBP9.5□□□□□ -0.89
NPHP1-209ENST00000461707 PPM1GO15355 546 aaPredicted RBP9.49□□□□□ -0.89
NPHP1-209ENST00000461707 LAMA4Q16363 1823 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 SEC24BO95487 1268 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 KIAA0232Q92628 1395 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 ABCC4O15439 1325 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 LTKP29376 864 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 POLKQ9UBT6 870 aa9.49□□□□□ -0.89
NPHP1-209ENST00000461707 AFDNP55196 1824 aaKnown RBP9.49□□□□□ -0.89
NPHP1-209ENST00000461707 CENPQQ7L2Z9 268 aaPredicted RBP9.48□□□□□ -0.89
NPHP1-209ENST00000461707 ZBTB47Q9UFB7 747 aaPredicted RBP9.48□□□□□ -0.89
NPHP1-209ENST00000461707 THUMPD2Q9BTF0 503 aaKnown RBP9.48□□□□□ -0.89
NPHP1-209ENST00000461707 NUTM2FA1L443 756 aa9.47□□□□□ -0.89
NPHP1-209ENST00000461707 WASLO00401 505 aaPredicted RBP9.47□□□□□ -0.89
NPHP1-209ENST00000461707 PLPPR3Q6T4P5 718 aa9.47□□□□□ -0.89
NPHP1-209ENST00000461707 PHACTR3Q96KR7 559 aa9.47□□□□□ -0.89
NPHP1-209ENST00000461707 ECM29Q5VYK3 1845 aa9.47□□□□□ -0.89
NPHP1-209ENST00000461707 TMPOP42166 694 aaKnown RBP9.46□□□□□ -0.89
NPHP1-209ENST00000461707 EXOSC9Q06265 439 aaKnown RBP9.46□□□□□ -0.89
NPHP1-209ENST00000461707 NME9Q86XW9 330 aa9.46□□□□□ -0.89
NPHP1-209ENST00000461707 EMILIN1Q9Y6C2 1016 aa9.46□□□□□ -0.89
NPHP1-209ENST00000461707 HMOX1P09601 288 aa9.46□□□□□ -0.9
NPHP1-209ENST00000461707 TBX22Q9Y458 520 aa9.46□□□□□ -0.9
NPHP1-209ENST00000461707 CEBPAP49715 358 aaPredicted RBP9.46□□□□□ -0.9
NPHP1-209ENST00000461707 CANXP27824 592 aaKnown RBP9.45□□□□□ -0.9
NPHP1-209ENST00000461707 AHDC1Q5TGY3 1603 aaPredicted RBP9.45□□□□□ -0.9
NPHP1-209ENST00000461707 KCPQ6ZWJ8 1503 aa9.45□□□□□ -0.9
NPHP1-209ENST00000461707 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms