RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RETREG2Q8NC44 543 aa5.66□□□□□ -1.5
VCL-203ENST00000461383 ADAMTS19Q8TE59 1207 aa5.66□□□□□ -1.5
VCL-203ENST00000461383 GPR37L1O60883 481 aa5.65□□□□□ -1.5
VCL-203ENST00000461383 WFS1O76024 890 aa5.65□□□□□ -1.5
VCL-203ENST00000461383 AEBP1Q8IUX7 1158 aa5.65□□□□□ -1.5
VCL-203ENST00000461383 MPNDQ8N594 471 aa5.65□□□□□ -1.5
VCL-203ENST00000461383 PBXIP1Q96AQ6 731 aa5.65□□□□□ -1.5
VCL-203ENST00000461383 PPP1R12CQ9BZL4 782 aa5.65□□□□□ -1.5
VCL-203ENST00000461383 FKBPLQ9UIM3 349 aa5.65□□□□□ -1.5
VCL-203ENST00000461383 CSB-PGBD3P0DP91 1061 aa5.64□□□□□ -1.51
VCL-203ENST00000461383 SNRPBP14678 240 aaKnown RBP5.64□□□□□ -1.51
VCL-203ENST00000461383 LMOD1P29536 600 aaPredicted RBP5.64□□□□□ -1.51
VCL-203ENST00000461383 SH3BP2P78314 561 aa5.64□□□□□ -1.51
VCL-203ENST00000461383 NR1H3Q13133 447 aa5.64□□□□□ -1.51
VCL-203ENST00000461383 KCTD17Q8N5Z5 321 aa5.64□□□□□ -1.51
VCL-203ENST00000461383 TRAIPQ9BWF2 469 aa5.64□□□□□ -1.51
VCL-203ENST00000461383 ALG2Q9H553 416 aa5.64□□□□□ -1.51
VCL-203ENST00000461383 EVA1BQ9NVM1 165 aa5.64□□□□□ -1.51
VCL-203ENST00000461383 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.63□□□□□ -1.51
VCL-203ENST00000461383 PALM3A6NDB9 673 aaPredicted RBP5.63□□□□□ -1.51
VCL-203ENST00000461383 ZBBXA8MT70 800 aa5.63□□□□□ -1.51
VCL-203ENST00000461383 LCE2CQ5TA81 110 aa5.63□□□□□ -1.51
VCL-203ENST00000461383 EHBP1Q8NDI1 1231 aa5.63□□□□□ -1.51
VCL-203ENST00000461383 ARMC2Q8NEN0 867 aa5.63□□□□□ -1.51
VCL-203ENST00000461383 UNC93B1Q9H1C4 597 aa5.63□□□□□ -1.51
VCL-203ENST00000461383 MAP10Q9P2G4 905 aa5.63□□□□□ -1.51
VCL-203ENST00000461383 TFIP11Q9UBB9 837 aaKnown RBP5.63□□□□□ -1.51
VCL-203ENST00000461383 ZC3H4Q9UPT8 1303 aaKnown RBP5.63□□□□□ -1.51
VCL-203ENST00000461383 TERTO14746 1132 aaKnown RBP5.62□□□□□ -1.51
VCL-203ENST00000461383 ALDH1A1P00352 501 aa5.62□□□□□ -1.51
VCL-203ENST00000461383 FBXO45P0C2W1 286 aa5.62□□□□□ -1.51
VCL-203ENST00000461383 KCNH2Q12809 1159 aa5.62□□□□□ -1.51
VCL-203ENST00000461383 CFAP70Q5T0N1 1121 aa5.62□□□□□ -1.51
VCL-203ENST00000461383 ZNF592Q92610 1267 aa5.62□□□□□ -1.51
VCL-203ENST00000461383 F12P00748 615 aaPredicted RBP5.61□□□□□ -1.51
VCL-203ENST00000461383 PTK2Q05397 1052 aa5.61□□□□□ -1.51
VCL-203ENST00000461383 NPAS3Q8IXF0 933 aa5.61□□□□□ -1.51
VCL-203ENST00000461383 VARSP26640 1264 aaKnown RBP5.6□□□□□ -1.51
VCL-203ENST00000461383 CDCA8Q53HL2 280 aa5.6□□□□□ -1.51
VCL-203ENST00000461383 NBPF14Q5TI25 921 aa5.6□□□□□ -1.51
VCL-203ENST00000461383 TRIM46Q7Z4K8 759 aa5.6□□□□□ -1.51
VCL-203ENST00000461383 ZNF511Q8NB15 262 aa5.6□□□□□ -1.51
VCL-203ENST00000461383 UCN2Q96RP3 112 aa5.6□□□□□ -1.51
VCL-203ENST00000461383 STK17AQ9UEE5 414 aa5.6□□□□□ -1.51
VCL-203ENST00000461383 ATP9BO43861 1147 aa5.59□□□□□ -1.51
VCL-203ENST00000461383 INSM1Q01101 510 aaPredicted RBP5.59□□□□□ -1.51
VCL-203ENST00000461383 TBC1D9Q6ZT07 1266 aa5.59□□□□□ -1.51
VCL-203ENST00000461383 GPKOWQ92917 476 aaPredicted RBP eCLIP5.59□□□□□ -1.51
VCL-203ENST00000461383 CCDC9Q9Y3X0 531 aaKnown RBP5.59□□□□□ -1.51
VCL-203ENST00000461383 PCDHB9Q9Y5E1 797 aa5.59□□□□□ -1.51
VCL-203ENST00000461383 CAPN5O15484 640 aaPredicted RBP5.58□□□□□ -1.52
VCL-203ENST00000461383 SKIP12755 728 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 SLFNL1Q499Z3 407 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 PDXDC2PQ6P474 469 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 BAP1Q92560 729 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 ARHGAP9Q9BRR9 750 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 USTQ9Y2C2 406 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 GPSM3Q9Y4H4 160 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 MAFBQ9Y5Q3 323 aaPredicted RBP5.58□□□□□ -1.52
VCL-203ENST00000461383 WASF2Q9Y6W5 498 aa5.58□□□□□ -1.52
VCL-203ENST00000461383 PATL2C9JE40 543 aaKnown RBP5.57□□□□□ -1.52
VCL-203ENST00000461383 MCCD1P59942 119 aaPredicted RBP5.57□□□□□ -1.52
VCL-203ENST00000461383 AGERQ15109 404 aa5.57□□□□□ -1.52
VCL-203ENST00000461383 ZBTB33Q86T24 672 aa5.57□□□□□ -1.52
VCL-203ENST00000461383 CDK15Q96Q40 435 aa5.57□□□□□ -1.52
VCL-203ENST00000461383 VRTNQ9H8Y1 702 aa5.57□□□□□ -1.52
VCL-203ENST00000461383 TLL2Q9Y6L7 1015 aa5.57□□□□□ -1.52
VCL-203ENST00000461383 PIK3CDO00329 1044 aa5.56□□□□□ -1.52
VCL-203ENST00000461383 BMP1P13497 986 aa5.56□□□□□ -1.52
VCL-203ENST00000461383 LINC01559Q495D7 138 aa5.56□□□□□ -1.52
VCL-203ENST00000461383 NXF1Q9UBU9 619 aaKnown RBP5.56□□□□□ -1.52
VCL-203ENST00000461383 MAGEB6P1A0A0J9YX57 407 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 USP17L3A6NCW0 530 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 USP17L4A6NCW7 530 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 ADH1CP00326 375 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 NNTQ13423 1086 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 USP17L2Q6R6M4 530 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 USP17L1Q7RTZ2 530 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 DZIP3Q86Y13 1208 aaKnown RBP5.55□□□□□ -1.52
VCL-203ENST00000461383 RNF135Q8IUD6 432 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 NFATC2IPQ8NCF5 419 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 KLF16Q9BXK1 252 aaPredicted RBP5.55□□□□□ -1.52
VCL-203ENST00000461383 CARD14Q9BXL6 1004 aa5.55□□□□□ -1.52
VCL-203ENST00000461383 USP17L5A8MUK1 530 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 H3BM21 787 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 ATG7O95352 703 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 TIMP2P16035 220 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 RANGAP1P46060 587 aaPredicted RBP5.54□□□□□ -1.52
VCL-203ENST00000461383 SRPK2P78362 688 aaKnown RBP5.54□□□□□ -1.52
VCL-203ENST00000461383 DEPDC4Q8N2C3 294 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 FAM174AQ8TBP5 190 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 ADAM32Q8TC27 787 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 SLC16A10Q8TF71 515 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 CEP126Q9P2H0 1117 aa5.54□□□□□ -1.52
VCL-203ENST00000461383 BRD1O95696 1058 aa5.53□□□□□ -1.52
VCL-203ENST00000461383 LARP1Q6PKG0 1096 aaKnown RBP5.53□□□□□ -1.52
VCL-203ENST00000461383 C1QTNF2Q9BXJ5 285 aa5.53□□□□□ -1.52
VCL-203ENST00000461383 GZF1Q9H116 711 aaPredicted RBP5.53□□□□□ -1.52
VCL-203ENST00000461383 CARNS1A5YM72 827 aa5.52□□□□□ -1.53
VCL-203ENST00000461383 VSIG8P0DPA2 414 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms