RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 GNAI1P63096 354 aa12.56□□□□□ -0.4
DHFR2-203ENST00000461173 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
DHFR2-203ENST00000461173 ROBO2Q9HCK4 1378 aa12.56□□□□□ -0.4
DHFR2-203ENST00000461173 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
DHFR2-203ENST00000461173 NME9Q86XW9 330 aa12.55□□□□□ -0.4
DHFR2-203ENST00000461173 PTCH1Q13635 1447 aa12.55□□□□□ -0.4
DHFR2-203ENST00000461173 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
DHFR2-203ENST00000461173 TNNQ9UQP3 1299 aa12.55□□□□□ -0.4
DHFR2-203ENST00000461173 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
DHFR2-203ENST00000461173 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
DHFR2-203ENST00000461173 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
DHFR2-203ENST00000461173 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
DHFR2-203ENST00000461173 SMC5Q8IY18 1101 aa12.54□□□□□ -0.4
DHFR2-203ENST00000461173 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
DHFR2-203ENST00000461173 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
DHFR2-203ENST00000461173 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
DHFR2-203ENST00000461173 USP19O94966 1318 aa12.54□□□□□ -0.4
DHFR2-203ENST00000461173 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
DHFR2-203ENST00000461173 USP6P35125 1406 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 HAP1P54257 671 aaPredicted RBP12.53□□□□□ -0.4
DHFR2-203ENST00000461173 NBR1Q14596 966 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
DHFR2-203ENST00000461173 VAMP4O75379 141 aa12.52□□□□□ -0.41
DHFR2-203ENST00000461173 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
DHFR2-203ENST00000461173 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
DHFR2-203ENST00000461173 LTKP29376 864 aa12.51□□□□□ -0.41
DHFR2-203ENST00000461173 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
DHFR2-203ENST00000461173 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
DHFR2-203ENST00000461173 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
DHFR2-203ENST00000461173 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
DHFR2-203ENST00000461173 MRPL50Q8N5N7 158 aaKnown RBP12.5□□□□□ -0.41
DHFR2-203ENST00000461173 PTPRUQ92729 1446 aa12.5□□□□□ -0.41
DHFR2-203ENST00000461173 BECN1Q14457 450 aa12.49□□□□□ -0.41
DHFR2-203ENST00000461173 ACEP12821 1306 aa12.49□□□□□ -0.41
DHFR2-203ENST00000461173 RIMS1Q86UR5 1692 aaKnown RBP12.49□□□□□ -0.41
DHFR2-203ENST00000461173 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
DHFR2-203ENST00000461173 HMOX1P09601 288 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 ABCC4O15439 1325 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 FBLN1P23142 703 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 THEMISQ8N1K5 641 aaPredicted RBP12.48□□□□□ -0.41
DHFR2-203ENST00000461173 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 MBIPQ9NS73 344 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
DHFR2-203ENST00000461173 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
DHFR2-203ENST00000461173 RRS1Q15050 365 aaKnown RBP12.47□□□□□ -0.41
DHFR2-203ENST00000461173 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
DHFR2-203ENST00000461173 GCC1Q96CN9 775 aa12.47□□□□□ -0.41
DHFR2-203ENST00000461173 API5Q9BZZ5 524 aaKnown RBP12.47□□□□□ -0.41
DHFR2-203ENST00000461173 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
DHFR2-203ENST00000461173 ZBTB7BO15156 539 aaPredicted RBP12.46□□□□□ -0.41
DHFR2-203ENST00000461173 NUCB1Q02818 461 aa12.46□□□□□ -0.41
DHFR2-203ENST00000461173 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
DHFR2-203ENST00000461173 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.42
DHFR2-203ENST00000461173 LAS1LQ9Y4W2 734 aaKnown RBP12.46□□□□□ -0.42
DHFR2-203ENST00000461173 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.42
DHFR2-203ENST00000461173 KDRP35968 1356 aa12.44□□□□□ -0.42
DHFR2-203ENST00000461173 USP54Q70EL1 1684 aa12.44□□□□□ -0.42
DHFR2-203ENST00000461173 CHL1O00533 1208 aa12.44□□□□□ -0.42
DHFR2-203ENST00000461173 SEC24BO95487 1268 aa12.44□□□□□ -0.42
DHFR2-203ENST00000461173 AMOTL2Q9Y2J4 779 aa12.44□□□□□ -0.42
DHFR2-203ENST00000461173 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
DHFR2-203ENST00000461173 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
DHFR2-203ENST00000461173 FLT4P35916 1363 aa12.43□□□□□ -0.42
DHFR2-203ENST00000461173 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
DHFR2-203ENST00000461173 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
DHFR2-203ENST00000461173 NFKBIBQ15653 356 aa12.43□□□□□ -0.42
DHFR2-203ENST00000461173 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
DHFR2-203ENST00000461173 SULT6B1Q6IMI4 303 aa12.42□□□□□ -0.42
DHFR2-203ENST00000461173 THUMPD2Q9BTF0 503 aaKnown RBP12.42□□□□□ -0.42
DHFR2-203ENST00000461173 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
DHFR2-203ENST00000461173 BMP2KLQ5H9B9 411 aa12.41□□□□□ -0.42
DHFR2-203ENST00000461173 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
DHFR2-203ENST00000461173 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
DHFR2-203ENST00000461173 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
DHFR2-203ENST00000461173 PTPRCP08575 1304 aa12.4□□□□□ -0.42
DHFR2-203ENST00000461173 CRB1P82279 1406 aa12.4□□□□□ -0.42
DHFR2-203ENST00000461173 SLC26A8Q96RN1 970 aa12.4□□□□□ -0.42
DHFR2-203ENST00000461173 FMN2Q9NZ56 1722 aa12.4□□□□□ -0.42
DHFR2-203ENST00000461173 SOS1Q07889 1333 aaPredicted RBP12.4□□□□□ -0.42
DHFR2-203ENST00000461173 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
DHFR2-203ENST00000461173 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
DHFR2-203ENST00000461173 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
DHFR2-203ENST00000461173 CEBPAP49715 358 aaPredicted RBP12.39□□□□□ -0.43
DHFR2-203ENST00000461173 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
DHFR2-203ENST00000461173 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
DHFR2-203ENST00000461173 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
DHFR2-203ENST00000461173 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
DHFR2-203ENST00000461173 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
DHFR2-203ENST00000461173 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
DHFR2-203ENST00000461173 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
DHFR2-203ENST00000461173 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
DHFR2-203ENST00000461173 NGDNQ8NEJ9 315 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms