RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 CCDC125Q86Z20 511 aa17.99■□□□□ 0.47
SHISA5-211ENST00000460758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHISA5-211ENST00000460758 USP35Q9P2H5 1018 aa17.99■□□□□ 0.47
SHISA5-211ENST00000460758 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
SHISA5-211ENST00000460758 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
SHISA5-211ENST00000460758 OVOS2Q6IE36 1432 aa17.98■□□□□ 0.47
SHISA5-211ENST00000460758 SOX12O15370 315 aa17.98■□□□□ 0.47
SHISA5-211ENST00000460758 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
SHISA5-211ENST00000460758 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
SHISA5-211ENST00000460758 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
SHISA5-211ENST00000460758 ARHGEF25Q86VW2 580 aa17.97■□□□□ 0.47
SHISA5-211ENST00000460758 TERF2IPQ9NYB0 399 aa17.97■□□□□ 0.47
SHISA5-211ENST00000460758 FAM182BQ5T319 152 aa17.96■□□□□ 0.47
SHISA5-211ENST00000460758 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
SHISA5-211ENST00000460758 PEAK1Q9H792 1746 aa17.95■□□□□ 0.46
SHISA5-211ENST00000460758 TCP11L2Q8N4U5 519 aa17.95■□□□□ 0.46
SHISA5-211ENST00000460758 ANKRD36BQ8N2N9 1353 aa17.94■□□□□ 0.46
SHISA5-211ENST00000460758 SBF2Q86WG5 1849 aa17.94■□□□□ 0.46
SHISA5-211ENST00000460758 TMF1P82094 1093 aa17.94■□□□□ 0.46
SHISA5-211ENST00000460758 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
SHISA5-211ENST00000460758 WDR17Q8IZU2 1322 aa17.93■□□□□ 0.46
SHISA5-211ENST00000460758 THRAP3Q9Y2W1 955 aaKnown RBP17.92■□□□□ 0.46
SHISA5-211ENST00000460758 FAM208AQ9UK61 1670 aaKnown RBP17.92■□□□□ 0.46
SHISA5-211ENST00000460758 RGPD2P0DJD1 1756 aa17.89■□□□□ 0.45
SHISA5-211ENST00000460758 SF3B2Q13435 895 aaKnown RBP17.89■□□□□ 0.45
SHISA5-211ENST00000460758 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
SHISA5-211ENST00000460758 DISP2A7MBM2 1401 aa17.89■□□□□ 0.45
SHISA5-211ENST00000460758 RREB1Q92766 1687 aa17.88■□□□□ 0.45
SHISA5-211ENST00000460758 ERBB3P21860 1342 aa17.86■□□□□ 0.45
SHISA5-211ENST00000460758 CSB-PGBD3P0DP91 1061 aa17.85■□□□□ 0.45
SHISA5-211ENST00000460758 PDE3BQ13370 1112 aa17.85■□□□□ 0.45
SHISA5-211ENST00000460758 CDCA8Q53HL2 280 aa17.85■□□□□ 0.45
SHISA5-211ENST00000460758 NUP188Q5SRE5 1749 aa17.85■□□□□ 0.45
SHISA5-211ENST00000460758 FAM196AQ6ZSG2 479 aa17.85■□□□□ 0.45
SHISA5-211ENST00000460758 RGPD3A6NKT7 1758 aaPredicted RBP17.84■□□□□ 0.45
SHISA5-211ENST00000460758 RGPD4Q7Z3J3 1758 aa17.84■□□□□ 0.45
SHISA5-211ENST00000460758 ANKRD26Q9UPS8 1709 aa17.84■□□□□ 0.45
SHISA5-211ENST00000460758 OVOS2A0A0G2JMS6 1433 aa17.84■□□□□ 0.45
SHISA5-211ENST00000460758 BAG6P46379 1132 aa17.84■□□□□ 0.45
SHISA5-211ENST00000460758 EIF4G2P78344 907 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHISA5-211ENST00000460758 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
SHISA5-211ENST00000460758 CCDC7Q96M83 1385 aa17.83■□□□□ 0.45
SHISA5-211ENST00000460758 TRIM37O94972 964 aa17.83■□□□□ 0.44
SHISA5-211ENST00000460758 HSPA5P11021 654 aaKnown RBP17.83■□□□□ 0.44
SHISA5-211ENST00000460758 COG3Q96JB2 828 aa17.83■□□□□ 0.44
SHISA5-211ENST00000460758 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
SHISA5-211ENST00000460758 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
SHISA5-211ENST00000460758 FYB1O15117 783 aa17.81■□□□□ 0.44
SHISA5-211ENST00000460758 EN1Q05925 392 aaPredicted RBP17.81■□□□□ 0.44
SHISA5-211ENST00000460758 DDB1Q16531 1140 aa17.81■□□□□ 0.44
SHISA5-211ENST00000460758 SHANK3Q9BYB0 1731 aa17.81■□□□□ 0.44
SHISA5-211ENST00000460758 MAP3K19Q56UN5 1328 aa17.8■□□□□ 0.44
SHISA5-211ENST00000460758 CDCA7Q9BWT1 371 aaPredicted RBP17.8■□□□□ 0.44
SHISA5-211ENST00000460758 GGNBP2Q9H3C7 697 aa17.8■□□□□ 0.44
SHISA5-211ENST00000460758 FBLN1P23142 703 aa17.79■□□□□ 0.44
SHISA5-211ENST00000460758 ANKRD24Q8TF21 1146 aa17.79■□□□□ 0.44
SHISA5-211ENST00000460758 CARD14Q9BXL6 1004 aa17.79■□□□□ 0.44
SHISA5-211ENST00000460758 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
SHISA5-211ENST00000460758 MAP2P11137 1827 aaKnown RBP17.78■□□□□ 0.44
SHISA5-211ENST00000460758 IP6K1Q92551 441 aa17.78■□□□□ 0.44
SHISA5-211ENST00000460758 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
SHISA5-211ENST00000460758 HOXC9P31274 260 aa17.77■□□□□ 0.44
SHISA5-211ENST00000460758 NLRP2Q9NX02 1062 aa17.77■□□□□ 0.44
SHISA5-211ENST00000460758 BCL9O00512 1426 aa17.77■□□□□ 0.44
SHISA5-211ENST00000460758 EZH2Q15910 746 aaKnown RBP17.76■□□□□ 0.43
SHISA5-211ENST00000460758 MARCH10Q8NA82 808 aaPredicted RBP17.76■□□□□ 0.43
SHISA5-211ENST00000460758 LRP5O75197 1615 aa17.76■□□□□ 0.43
SHISA5-211ENST00000460758 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
SHISA5-211ENST00000460758 APBA3O96018 575 aa17.75■□□□□ 0.43
SHISA5-211ENST00000460758 CAMKK2Q96RR4 588 aa17.75■□□□□ 0.43
SHISA5-211ENST00000460758 PARD3Q8TEW0 1356 aa17.75■□□□□ 0.43
SHISA5-211ENST00000460758 RRS1Q15050 365 aaKnown RBP17.74■□□□□ 0.43
SHISA5-211ENST00000460758 LTV1Q96GA3 475 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-211ENST00000460758 BTAF1O14981 1849 aa17.73■□□□□ 0.43
SHISA5-211ENST00000460758 AMPHP49418 695 aa17.73■□□□□ 0.43
SHISA5-211ENST00000460758 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
SHISA5-211ENST00000460758 DOT1LQ8TEK3 1739 aa17.72■□□□□ 0.43
SHISA5-211ENST00000460758 IL2RBP14784 551 aa17.72■□□□□ 0.43
SHISA5-211ENST00000460758 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
SHISA5-211ENST00000460758 PSDA5PKW4 1024 aaPredicted RBP17.71■□□□□ 0.43
SHISA5-211ENST00000460758 EXOC5O00471 708 aa17.71■□□□□ 0.43
SHISA5-211ENST00000460758 MEGF6O75095 1541 aa17.71■□□□□ 0.43
SHISA5-211ENST00000460758 KAT6BQ8WYB5 2073 aa17.7■□□□□ 0.42
SHISA5-211ENST00000460758 FLT4P35916 1363 aa17.7■□□□□ 0.42
SHISA5-211ENST00000460758 KIF24Q5T7B8 1368 aa17.69■□□□□ 0.42
SHISA5-211ENST00000460758 SRCAPQ6ZRS2 3230 aa17.69■□□□□ 0.42
SHISA5-211ENST00000460758 INSRP06213 1382 aa17.68■□□□□ 0.42
SHISA5-211ENST00000460758 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
SHISA5-211ENST00000460758 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
SHISA5-211ENST00000460758 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
SHISA5-211ENST00000460758 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
SHISA5-211ENST00000460758 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
SHISA5-211ENST00000460758 HSP90AB2PQ58FF8 381 aa17.66■□□□□ 0.42
SHISA5-211ENST00000460758 EMILIN1Q9Y6C2 1016 aa17.66■□□□□ 0.42
SHISA5-211ENST00000460758 NBPF6Q5VWK0 638 aa17.65■□□□□ 0.42
SHISA5-211ENST00000460758 NBPF4Q96M43 638 aa17.65■□□□□ 0.42
SHISA5-211ENST00000460758 CASZ1Q86V15 1759 aa17.64■□□□□ 0.41
SHISA5-211ENST00000460758 PLSCR1O15162 318 aa17.64■□□□□ 0.41
SHISA5-211ENST00000460758 USHBP1Q8N6Y0 703 aa17.64■□□□□ 0.41
SHISA5-211ENST00000460758 PANK3Q9H999 370 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms