RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
SFPQ-202ENST00000460428 NEFMP07197 916 aa10.5□□□□□ -0.73
SFPQ-202ENST00000460428 RIPK4P57078 832 aa10.5□□□□□ -0.73
SFPQ-202ENST00000460428 HSP90AB2PQ58FF8 381 aa10.5□□□□□ -0.73
SFPQ-202ENST00000460428 ABTB2Q8N961 1025 aa10.5□□□□□ -0.73
SFPQ-202ENST00000460428 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.5□□□□□ -0.73
SFPQ-202ENST00000460428 HSPA2P54652 639 aa10.49□□□□□ -0.73
SFPQ-202ENST00000460428 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
SFPQ-202ENST00000460428 PSME1Q06323 249 aa10.49□□□□□ -0.73
SFPQ-202ENST00000460428 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
SFPQ-202ENST00000460428 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
SFPQ-202ENST00000460428 KCNH5Q8NCM2 988 aa10.49□□□□□ -0.73
SFPQ-202ENST00000460428 RBM33Q96EV2 1170 aaKnown RBP10.49□□□□□ -0.73
SFPQ-202ENST00000460428 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
SFPQ-202ENST00000460428 ORAI2Q96SN7 254 aa10.49□□□□□ -0.73
SFPQ-202ENST00000460428 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
SFPQ-202ENST00000460428 LMOD3Q0VAK6 560 aa10.48□□□□□ -0.73
SFPQ-202ENST00000460428 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
SFPQ-202ENST00000460428 USP19O94966 1318 aa10.48□□□□□ -0.73
SFPQ-202ENST00000460428 IGSF1Q8N6C5 1336 aa10.48□□□□□ -0.73
SFPQ-202ENST00000460428 XIRP1Q702N8 1843 aaKnown RBP10.47□□□□□ -0.73
SFPQ-202ENST00000460428 HMOX1P09601 288 aa10.47□□□□□ -0.73
SFPQ-202ENST00000460428 ATF3P18847 181 aa10.47□□□□□ -0.73
SFPQ-202ENST00000460428 HOXC9P31274 260 aa10.47□□□□□ -0.73
SFPQ-202ENST00000460428 PDE3AQ14432 1141 aa10.47□□□□□ -0.73
SFPQ-202ENST00000460428 IP6K1Q92551 441 aa10.47□□□□□ -0.73
SFPQ-202ENST00000460428 ZNF428Q96B54 188 aa10.47□□□□□ -0.73
SFPQ-202ENST00000460428 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
SFPQ-202ENST00000460428 RARSP54136 660 aaKnown RBP10.46□□□□□ -0.73
SFPQ-202ENST00000460428 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.73
SFPQ-202ENST00000460428 SULT6B1Q6IMI4 303 aa10.46□□□□□ -0.73
SFPQ-202ENST00000460428 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.73
SFPQ-202ENST00000460428 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 MSH6P52701 1360 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 FOXO3O43524 673 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 AMPHP49418 695 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 KRT28Q7Z3Y7 464 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 EXOC6Q8TAG9 804 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
SFPQ-202ENST00000460428 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
SFPQ-202ENST00000460428 PAK3O75914 559 aaPredicted RBP10.44□□□□□ -0.74
SFPQ-202ENST00000460428 GNAI1P63096 354 aa10.44□□□□□ -0.74
SFPQ-202ENST00000460428 AAMPQ13685 434 aa10.44□□□□□ -0.74
SFPQ-202ENST00000460428 ARHGEF25Q86VW2 580 aa10.44□□□□□ -0.74
SFPQ-202ENST00000460428 AEBP1Q8IUX7 1158 aa10.44□□□□□ -0.74
SFPQ-202ENST00000460428 EYA1Q99502 592 aa10.44□□□□□ -0.74
SFPQ-202ENST00000460428 LTN1O94822 1766 aa10.44□□□□□ -0.74
SFPQ-202ENST00000460428 PLIN1O60240 522 aa10.43□□□□□ -0.74
SFPQ-202ENST00000460428 BCAR3O75815 825 aa10.43□□□□□ -0.74
SFPQ-202ENST00000460428 GCP02774 474 aa10.43□□□□□ -0.74
SFPQ-202ENST00000460428 ALDH1L2Q3SY69 923 aa10.43□□□□□ -0.74
SFPQ-202ENST00000460428 B4GALNT3Q6L9W6 998 aa10.43□□□□□ -0.74
SFPQ-202ENST00000460428 CFAP44Q96MT7 982 aa10.43□□□□□ -0.74
SFPQ-202ENST00000460428 ABCC6O95255 1503 aa10.43□□□□□ -0.74
SFPQ-202ENST00000460428 NPHP3Q7Z494 1330 aa10.42□□□□□ -0.74
SFPQ-202ENST00000460428 EXOSC9Q06265 439 aaKnown RBP10.42□□□□□ -0.74
SFPQ-202ENST00000460428 CCDC136Q96JN2 1154 aa10.42□□□□□ -0.74
SFPQ-202ENST00000460428 CRBNQ96SW2 442 aa10.42□□□□□ -0.74
SFPQ-202ENST00000460428 PXDNQ92626 1479 aa10.42□□□□□ -0.74
SFPQ-202ENST00000460428 PLEKHG2Q9H7P9 1386 aa10.41□□□□□ -0.74
SFPQ-202ENST00000460428 MED1Q15648 1581 aaPredicted RBP10.41□□□□□ -0.74
SFPQ-202ENST00000460428 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
SFPQ-202ENST00000460428 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
SFPQ-202ENST00000460428 CAMTA1Q9Y6Y1 1673 aa10.41□□□□□ -0.74
SFPQ-202ENST00000460428 CHL1O00533 1208 aa10.4□□□□□ -0.74
SFPQ-202ENST00000460428 MS4A1P11836 297 aa10.4□□□□□ -0.74
SFPQ-202ENST00000460428 NUTM2GQ5VZR2 741 aa10.4□□□□□ -0.74
SFPQ-202ENST00000460428 TNS3Q68CZ2 1445 aa10.4□□□□□ -0.75
SFPQ-202ENST00000460428 SOS2Q07890 1332 aaPredicted RBP10.39□□□□□ -0.75
SFPQ-202ENST00000460428 SPATA31A3Q5VYP0 1347 aa10.39□□□□□ -0.75
SFPQ-202ENST00000460428 CRYBG1Q9Y4K1 1723 aa10.39□□□□□ -0.75
SFPQ-202ENST00000460428 SOX12O15370 315 aa10.39□□□□□ -0.75
SFPQ-202ENST00000460428 VAMP4O75379 141 aa10.39□□□□□ -0.75
SFPQ-202ENST00000460428 MTHFSDQ2M296 383 aaKnown RBP10.39□□□□□ -0.75
SFPQ-202ENST00000460428 TSR2Q969E8 191 aaKnown RBP10.39□□□□□ -0.75
SFPQ-202ENST00000460428 BABAM1Q9NWV8 329 aa10.39□□□□□ -0.75
SFPQ-202ENST00000460428 CRB1P82279 1406 aa10.39□□□□□ -0.75
SFPQ-202ENST00000460428 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
SFPQ-202ENST00000460428 ZNF335Q9H4Z2 1342 aaPredicted RBP10.38□□□□□ -0.75
SFPQ-202ENST00000460428 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
SFPQ-202ENST00000460428 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
SFPQ-202ENST00000460428 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
SFPQ-202ENST00000460428 ARHGAP45Q92619 1136 aa10.38□□□□□ -0.75
SFPQ-202ENST00000460428 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
SFPQ-202ENST00000460428 CPDO75976 1380 aa10.38□□□□□ -0.75
SFPQ-202ENST00000460428 COL18A1P39060 1754 aa10.37□□□□□ -0.75
SFPQ-202ENST00000460428 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
SFPQ-202ENST00000460428 SSH1Q8WYL5 1049 aa10.37□□□□□ -0.75
SFPQ-202ENST00000460428 SLAIN2Q9P270 581 aa10.37□□□□□ -0.75
SFPQ-202ENST00000460428 KDM2BQ8NHM5 1336 aa10.36□□□□□ -0.75
SFPQ-202ENST00000460428 KIF16BQ96L93 1317 aa10.36□□□□□ -0.75
SFPQ-202ENST00000460428 NBPF6Q5VWK0 638 aa10.36□□□□□ -0.75
SFPQ-202ENST00000460428 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
SFPQ-202ENST00000460428 NBPF4Q96M43 638 aa10.36□□□□□ -0.75
SFPQ-202ENST00000460428 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
SFPQ-202ENST00000460428 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
SFPQ-202ENST00000460428 FAM83GA6ND36 823 aa10.35□□□□□ -0.75
SFPQ-202ENST00000460428 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
SFPQ-202ENST00000460428 XPCQ01831 940 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms