RNA–Protein interactions for RNA: ENST00000460043.5

CDK5RAP1-205, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-205ENST00000460043 SPATA31A3Q5VYP0 1347 aa18.43■□□□□ 0.54
CDK5RAP1-205ENST00000460043 IL13P35225 146 aa18.42■□□□□ 0.54
CDK5RAP1-205ENST00000460043 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
CDK5RAP1-205ENST00000460043 SOS2Q07890 1332 aaPredicted RBP18.42■□□□□ 0.54
CDK5RAP1-205ENST00000460043 RTL1A6NKG5 1358 aa18.42■□□□□ 0.54
CDK5RAP1-205ENST00000460043 SLIT3O75094 1523 aa18.41■□□□□ 0.54
CDK5RAP1-205ENST00000460043 GCP02774 474 aa18.41■□□□□ 0.54
CDK5RAP1-205ENST00000460043 MAP2P11137 1827 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP1-205ENST00000460043 NEFMP07197 916 aa18.4■□□□□ 0.54
CDK5RAP1-205ENST00000460043 ALS2Q96Q42 1657 aa18.39■□□□□ 0.53
CDK5RAP1-205ENST00000460043 FCHSD2O94868 740 aa18.39■□□□□ 0.53
CDK5RAP1-205ENST00000460043 MARF1Q9Y4F3 1742 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP1-205ENST00000460043 APAF1O14727 1248 aa18.38■□□□□ 0.53
CDK5RAP1-205ENST00000460043 HOXC9P31274 260 aa18.38■□□□□ 0.53
CDK5RAP1-205ENST00000460043 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
CDK5RAP1-205ENST00000460043 EIF4A2Q14240 407 aaKnown RBP18.38■□□□□ 0.53
CDK5RAP1-205ENST00000460043 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
CDK5RAP1-205ENST00000460043 MAPK8IP3Q9UPT6 1336 aa18.38■□□□□ 0.53
CDK5RAP1-205ENST00000460043 NFAT5O94916 1531 aa18.38■□□□□ 0.53
CDK5RAP1-205ENST00000460043 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
CDK5RAP1-205ENST00000460043 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
CDK5RAP1-205ENST00000460043 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
CDK5RAP1-205ENST00000460043 IP6K1Q92551 441 aa18.36■□□□□ 0.53
CDK5RAP1-205ENST00000460043 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
CDK5RAP1-205ENST00000460043 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
CDK5RAP1-205ENST00000460043 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP1-205ENST00000460043 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
CDK5RAP1-205ENST00000460043 NHSL1Q5SYE7 1610 aa18.34■□□□□ 0.53
CDK5RAP1-205ENST00000460043 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
CDK5RAP1-205ENST00000460043 AFF2P51816 1311 aa18.33■□□□□ 0.53
CDK5RAP1-205ENST00000460043 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.52
CDK5RAP1-205ENST00000460043 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
CDK5RAP1-205ENST00000460043 SRCAPQ6ZRS2 3230 aa18.33■□□□□ 0.52
CDK5RAP1-205ENST00000460043 HMOX1P09601 288 aa18.32■□□□□ 0.52
CDK5RAP1-205ENST00000460043 PRKAR2BP31323 418 aa18.32■□□□□ 0.52
CDK5RAP1-205ENST00000460043 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP1-205ENST00000460043 NUTM2BA6NNL0 878 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP1-205ENST00000460043 NUTM2EB1AL46 878 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP1-205ENST00000460043 HAP1P54257 671 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP1-205ENST00000460043 NUTM2AQ8IVF1 878 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP1-205ENST00000460043 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP1-205ENST00000460043 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
CDK5RAP1-205ENST00000460043 RGS12O14924 1447 aa18.3■□□□□ 0.52
CDK5RAP1-205ENST00000460043 PHRF1Q9P1Y6 1649 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP1-205ENST00000460043 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
CDK5RAP1-205ENST00000460043 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
CDK5RAP1-205ENST00000460043 LTV1Q96GA3 475 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP1-205ENST00000460043 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
CDK5RAP1-205ENST00000460043 RBM6P78332 1123 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP1-205ENST00000460043 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
CDK5RAP1-205ENST00000460043 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
CDK5RAP1-205ENST00000460043 CPDO75976 1380 aa18.28■□□□□ 0.52
CDK5RAP1-205ENST00000460043 LTN1O94822 1766 aa18.27■□□□□ 0.52
CDK5RAP1-205ENST00000460043 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
CDK5RAP1-205ENST00000460043 TMPOP42166 694 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP1-205ENST00000460043 EYA1Q99502 592 aa18.27■□□□□ 0.52
CDK5RAP1-205ENST00000460043 RRP7AQ9Y3A4 280 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP1-205ENST00000460043 ABCC6O95255 1503 aa18.25■□□□□ 0.51
CDK5RAP1-205ENST00000460043 WWC1Q8IX03 1113 aa18.25■□□□□ 0.51
CDK5RAP1-205ENST00000460043 QTRT2Q9H974 415 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP1-205ENST00000460043 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 RIPK4P57078 832 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 AEBP1Q8IUX7 1158 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 ANKRD24Q8TF21 1146 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 KDRP35968 1356 aa18.24■□□□□ 0.51
CDK5RAP1-205ENST00000460043 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
CDK5RAP1-205ENST00000460043 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
CDK5RAP1-205ENST00000460043 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
CDK5RAP1-205ENST00000460043 E9PSI1 815 aa18.22■□□□□ 0.51
CDK5RAP1-205ENST00000460043 PHACTR3Q96KR7 559 aa18.22■□□□□ 0.51
CDK5RAP1-205ENST00000460043 C8orf37Q96NL8 207 aa18.22■□□□□ 0.51
CDK5RAP1-205ENST00000460043 CDCA7LQ96GN5 454 aa18.21■□□□□ 0.51
CDK5RAP1-205ENST00000460043 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP1-205ENST00000460043 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
CDK5RAP1-205ENST00000460043 NBPF6Q5VWK0 638 aa18.2■□□□□ 0.5
CDK5RAP1-205ENST00000460043 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
CDK5RAP1-205ENST00000460043 NBPF4Q96M43 638 aa18.2■□□□□ 0.5
CDK5RAP1-205ENST00000460043 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
CDK5RAP1-205ENST00000460043 ERBB3P21860 1342 aa18.2■□□□□ 0.5
CDK5RAP1-205ENST00000460043 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
CDK5RAP1-205ENST00000460043 CHRNA2Q15822 529 aa18.19■□□□□ 0.5
CDK5RAP1-205ENST00000460043 GAS2L2Q8NHY3 880 aa18.18■□□□□ 0.5
CDK5RAP1-205ENST00000460043 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
CDK5RAP1-205ENST00000460043 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
CDK5RAP1-205ENST00000460043 IL16Q14005 1332 aa18.17■□□□□ 0.5
CDK5RAP1-205ENST00000460043 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP1-205ENST00000460043 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
CDK5RAP1-205ENST00000460043 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
CDK5RAP1-205ENST00000460043 DUSP27Q5VZP5 1158 aa18.15■□□□□ 0.5
CDK5RAP1-205ENST00000460043 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP1-205ENST00000460043 ABCA3Q99758 1704 aa18.15■□□□□ 0.5
CDK5RAP1-205ENST00000460043 NEFLP07196 543 aa18.14■□□□□ 0.49
CDK5RAP1-205ENST00000460043 COL18A1P39060 1754 aa18.14■□□□□ 0.49
CDK5RAP1-205ENST00000460043 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
CDK5RAP1-205ENST00000460043 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP1-205ENST00000460043 PLEKHO1Q53GL0 409 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP1-205ENST00000460043 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms