RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 SBF2Q86WG5 1849 aa24.19■■□□□ 1.46
TMEM50B-205ENST00000459909 ZBTB7CA1YPR0 619 aa24.19■■□□□ 1.46
TMEM50B-205ENST00000459909 C1QTNF8P60827 252 aa24.19■■□□□ 1.46
TMEM50B-205ENST00000459909 CDCA7Q9BWT1 371 aaPredicted RBP24.19■■□□□ 1.46
TMEM50B-205ENST00000459909 UTRNP46939 3433 aa24.18■■□□□ 1.46
TMEM50B-205ENST00000459909 MARCH10Q8NA82 808 aaPredicted RBP24.18■■□□□ 1.46
TMEM50B-205ENST00000459909 SLC15A2Q16348 729 aa24.17■■□□□ 1.46
TMEM50B-205ENST00000459909 TXNRD1Q16881 649 aa24.17■■□□□ 1.46
TMEM50B-205ENST00000459909 MTFR1LQ9H019 292 aa24.17■■□□□ 1.46
TMEM50B-205ENST00000459909 PPIP5K1Q6PFW1 1433 aa24.16■■□□□ 1.46
TMEM50B-205ENST00000459909 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
TMEM50B-205ENST00000459909 WDR17Q8IZU2 1322 aa24.14■■□□□ 1.46
TMEM50B-205ENST00000459909 NLRP6P59044 892 aa24.14■■□□□ 1.45
TMEM50B-205ENST00000459909 SGIP1Q9BQI5 828 aa24.14■■□□□ 1.45
TMEM50B-205ENST00000459909 SRPK2P78362 688 aaKnown RBP24.13■■□□□ 1.45
TMEM50B-205ENST00000459909 RAB3GAP2Q9H2M9 1393 aa24.13■■□□□ 1.45
TMEM50B-205ENST00000459909 SLIT3O75094 1523 aa24.12■■□□□ 1.45
TMEM50B-205ENST00000459909 AXIN2Q9Y2T1 843 aa24.1■■□□□ 1.45
TMEM50B-205ENST00000459909 IFFO2Q5TF58 517 aa24.09■■□□□ 1.45
TMEM50B-205ENST00000459909 ARXQ96QS3 562 aa24.09■■□□□ 1.45
TMEM50B-205ENST00000459909 USP6P35125 1406 aa24.09■■□□□ 1.45
TMEM50B-205ENST00000459909 MAP3K5Q99683 1374 aa24.08■■□□□ 1.45
TMEM50B-205ENST00000459909 CABP2Q9NPB3 220 aa24.08■■□□□ 1.45
TMEM50B-205ENST00000459909 EXOC5O00471 708 aa24.07■■□□□ 1.44
TMEM50B-205ENST00000459909 CARD10Q9BWT7 1032 aa24.07■■□□□ 1.44
TMEM50B-205ENST00000459909 CHD4Q14839 1912 aa24.06■■□□□ 1.44
TMEM50B-205ENST00000459909 WNK3Q9BYP7 1800 aa24.05■■□□□ 1.44
TMEM50B-205ENST00000459909 CPSF1Q10570 1443 aaKnown RBP24.05■■□□□ 1.44
TMEM50B-205ENST00000459909 CABP1Q9NZU7 370 aa24.05■■□□□ 1.44
TMEM50B-205ENST00000459909 COL18A1P39060 1754 aa24.05■■□□□ 1.44
TMEM50B-205ENST00000459909 AKAP12Q02952 1782 aa24.05■■□□□ 1.44
TMEM50B-205ENST00000459909 CSB-PGBD3P0DP91 1061 aa24.04■■□□□ 1.44
TMEM50B-205ENST00000459909 ARHGEF25Q86VW2 580 aa24.04■■□□□ 1.44
TMEM50B-205ENST00000459909 CENPJQ9HC77 1338 aaPredicted RBP24.04■■□□□ 1.44
TMEM50B-205ENST00000459909 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
TMEM50B-205ENST00000459909 GIGYF1O75420 1035 aaPredicted RBP24.01■■□□□ 1.43
TMEM50B-205ENST00000459909 GPR162Q16538 588 aa24.01■■□□□ 1.43
TMEM50B-205ENST00000459909 NBPF1Q3BBV0 1214 aa24.01■■□□□ 1.43
TMEM50B-205ENST00000459909 CCDC7Q96M83 1385 aa24.01■■□□□ 1.43
TMEM50B-205ENST00000459909 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
TMEM50B-205ENST00000459909 TNS2Q63HR2 1409 aa23.99■■□□□ 1.43
TMEM50B-205ENST00000459909 PIK3C2AO00443 1686 aa23.98■■□□□ 1.43
TMEM50B-205ENST00000459909 PAPPAQ13219 1627 aa23.95■■□□□ 1.43
TMEM50B-205ENST00000459909 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
TMEM50B-205ENST00000459909 NHSQ6T4R5 1651 aa23.95■■□□□ 1.42
TMEM50B-205ENST00000459909 TTC21BQ7Z4L5 1316 aa23.94■■□□□ 1.42
TMEM50B-205ENST00000459909 SOX12O15370 315 aa23.94■■□□□ 1.42
TMEM50B-205ENST00000459909 ZNF692Q9BU19 519 aaPredicted RBP23.94■■□□□ 1.42
TMEM50B-205ENST00000459909 TRPM1Q7Z4N2 1603 aa23.94■■□□□ 1.42
TMEM50B-205ENST00000459909 ZNF827Q17R98 1081 aa23.93■■□□□ 1.42
TMEM50B-205ENST00000459909 SLC16A10Q8TF71 515 aa23.93■■□□□ 1.42
TMEM50B-205ENST00000459909 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
TMEM50B-205ENST00000459909 POLD1P28340 1107 aa23.91■■□□□ 1.42
TMEM50B-205ENST00000459909 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
TMEM50B-205ENST00000459909 ABCC6O95255 1503 aa23.9■■□□□ 1.42
TMEM50B-205ENST00000459909 TTC21AQ8NDW8 1320 aa23.9■■□□□ 1.42
TMEM50B-205ENST00000459909 KLHL34Q8N239 644 aa23.9■■□□□ 1.42
TMEM50B-205ENST00000459909 LRRC4BQ9NT99 713 aa23.89■■□□□ 1.41
TMEM50B-205ENST00000459909 EVC2Q86UK5 1308 aa23.88■■□□□ 1.41
TMEM50B-205ENST00000459909 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
TMEM50B-205ENST00000459909 NFAT5O94916 1531 aa23.88■■□□□ 1.41
TMEM50B-205ENST00000459909 RGPD5Q99666 1765 aa23.88■■□□□ 1.41
TMEM50B-205ENST00000459909 AKT1S1Q96B36 256 aa23.87■■□□□ 1.41
TMEM50B-205ENST00000459909 IL2RBP14784 551 aa23.86■■□□□ 1.41
TMEM50B-205ENST00000459909 SLC27A3Q5K4L6 730 aa23.85■■□□□ 1.41
TMEM50B-205ENST00000459909 NLRP2Q9NX02 1062 aa23.85■■□□□ 1.41
TMEM50B-205ENST00000459909 ERBB3P21860 1342 aa23.84■■□□□ 1.41
TMEM50B-205ENST00000459909 BTAF1O14981 1849 aa23.82■■□□□ 1.4
TMEM50B-205ENST00000459909 SHANK3Q9BYB0 1731 aa23.82■■□□□ 1.4
TMEM50B-205ENST00000459909 GRIN3BO60391 1043 aa23.82■■□□□ 1.4
TMEM50B-205ENST00000459909 PNPLA7Q6ZV29 1317 aa23.82■■□□□ 1.4
TMEM50B-205ENST00000459909 CEP350Q5VT06 3117 aa23.81■■□□□ 1.4
TMEM50B-205ENST00000459909 NLGN2Q8NFZ4 835 aa23.81■■□□□ 1.4
TMEM50B-205ENST00000459909 TFCP2L1Q9NZI6 479 aa23.8■■□□□ 1.4
TMEM50B-205ENST00000459909 GOLGB1Q14789 3259 aaKnown RBP23.79■■□□□ 1.4
TMEM50B-205ENST00000459909 KTN1Q86UP2 1357 aaKnown RBP23.79■■□□□ 1.4
TMEM50B-205ENST00000459909 COL24A1Q17RW2 1714 aa23.78■■□□□ 1.4
TMEM50B-205ENST00000459909 QSER1Q2KHR3 1735 aa23.78■■□□□ 1.4
TMEM50B-205ENST00000459909 USP31Q70CQ4 1352 aa23.77■■□□□ 1.4
TMEM50B-205ENST00000459909 YBX3P16989 372 aaKnown RBP eCLIP23.76■■□□□ 1.39
TMEM50B-205ENST00000459909 ANKRD24Q8TF21 1146 aa23.75■■□□□ 1.39
TMEM50B-205ENST00000459909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.72■■□□□ 1.39
TMEM50B-205ENST00000459909 DDX54Q8TDD1 881 aaKnown RBP23.72■■□□□ 1.39
TMEM50B-205ENST00000459909 ATP10DQ9P241 1426 aa23.72■■□□□ 1.39
TMEM50B-205ENST00000459909 KCNQ4P56696 695 aa23.7■■□□□ 1.38
TMEM50B-205ENST00000459909 NME9Q86XW9 330 aa23.69■■□□□ 1.38
TMEM50B-205ENST00000459909 SYTL4Q96C24 671 aaPredicted RBP23.69■■□□□ 1.38
TMEM50B-205ENST00000459909 GPBP1L1Q9HC44 474 aaPredicted RBP23.69■■□□□ 1.38
TMEM50B-205ENST00000459909 ANKRD36BQ8N2N9 1353 aa23.67■■□□□ 1.38
TMEM50B-205ENST00000459909 USP54Q70EL1 1684 aa23.67■■□□□ 1.38
TMEM50B-205ENST00000459909 HSPA6P17066 643 aa23.67■■□□□ 1.38
TMEM50B-205ENST00000459909 PRIM1P49642 420 aaKnown RBP23.67■■□□□ 1.38
TMEM50B-205ENST00000459909 MON2Q7Z3U7 1717 aa23.66■■□□□ 1.38
TMEM50B-205ENST00000459909 SBNO2Q9Y2G9 1366 aa23.65■■□□□ 1.38
TMEM50B-205ENST00000459909 KAT6BQ8WYB5 2073 aa23.65■■□□□ 1.38
TMEM50B-205ENST00000459909 MSH5O43196 834 aa23.65■■□□□ 1.38
TMEM50B-205ENST00000459909 CCNL1Q9UK58 526 aaPredicted RBP23.65■■□□□ 1.38
TMEM50B-205ENST00000459909 TUBGCP6Q96RT7 1819 aa23.65■■□□□ 1.38
TMEM50B-205ENST00000459909 COL23A1Q86Y22 540 aaPredicted RBP23.64■■□□□ 1.37
TMEM50B-205ENST00000459909 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms