RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 EIF4G2P78344 907 aaKnown RBP eCLIP11.84□□□□□ -0.51
CCDC66-209ENST00000459746 IRF5Q13568 498 aa11.84□□□□□ -0.51
CCDC66-209ENST00000459746 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
CCDC66-209ENST00000459746 MYT1Q01538 1121 aa11.83□□□□□ -0.52
CCDC66-209ENST00000459746 NNTQ13423 1086 aa11.83□□□□□ -0.52
CCDC66-209ENST00000459746 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.52
CCDC66-209ENST00000459746 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
CCDC66-209ENST00000459746 SEPT12Q8IYM1 358 aa11.82□□□□□ -0.52
CCDC66-209ENST00000459746 HPS1Q92902 700 aa11.82□□□□□ -0.52
CCDC66-209ENST00000459746 PCDHB9Q9Y5E1 797 aa11.82□□□□□ -0.52
CCDC66-209ENST00000459746 SOX11P35716 441 aa11.81□□□□□ -0.52
CCDC66-209ENST00000459746 EMILIN1Q9Y6C2 1016 aa11.8□□□□□ -0.52
CCDC66-209ENST00000459746 AXIN1O15169 862 aa11.79□□□□□ -0.52
CCDC66-209ENST00000459746 FSHRP23945 695 aa11.79□□□□□ -0.52
CCDC66-209ENST00000459746 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
CCDC66-209ENST00000459746 CCDC116Q8IYX3 515 aa11.79□□□□□ -0.52
CCDC66-209ENST00000459746 ESPNB1AK53 854 aa11.78□□□□□ -0.52
CCDC66-209ENST00000459746 A6NJR5 290 aa11.77□□□□□ -0.53
CCDC66-209ENST00000459746 POM121Q96HA1 1249 aa11.77□□□□□ -0.53
CCDC66-209ENST00000459746 KLF16Q9BXK1 252 aaPredicted RBP11.76□□□□□ -0.53
CCDC66-209ENST00000459746 AAASQ9NRG9 546 aa11.76□□□□□ -0.53
CCDC66-209ENST00000459746 PGPEP1Q9NXJ5 209 aa11.76□□□□□ -0.53
CCDC66-209ENST00000459746 CAPN5O15484 640 aaPredicted RBP11.75□□□□□ -0.53
CCDC66-209ENST00000459746 NR3C2P08235 984 aa11.75□□□□□ -0.53
CCDC66-209ENST00000459746 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
CCDC66-209ENST00000459746 VAC14Q08AM6 782 aa11.75□□□□□ -0.53
CCDC66-209ENST00000459746 INTS6LQ5JSJ4 861 aaKnown RBP11.74□□□□□ -0.53
CCDC66-209ENST00000459746 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
CCDC66-209ENST00000459746 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
CCDC66-209ENST00000459746 GIGYF1O75420 1035 aaPredicted RBP11.72□□□□□ -0.53
CCDC66-209ENST00000459746 TIMP2P16035 220 aa11.72□□□□□ -0.53
CCDC66-209ENST00000459746 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
CCDC66-209ENST00000459746 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
CCDC66-209ENST00000459746 PROSER2Q86WR7 435 aaPredicted RBP11.71□□□□□ -0.53
CCDC66-209ENST00000459746 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
CCDC66-209ENST00000459746 ITPKCQ96DU7 683 aa11.7□□□□□ -0.54
CCDC66-209ENST00000459746 LCE2BO14633 110 aa11.69□□□□□ -0.54
CCDC66-209ENST00000459746 ST8SIA5O15466 376 aa11.69□□□□□ -0.54
CCDC66-209ENST00000459746 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
CCDC66-209ENST00000459746 ERVH48-1M5A8F1 160 aa11.68□□□□□ -0.54
CCDC66-209ENST00000459746 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
CCDC66-209ENST00000459746 ALG2Q9H553 416 aa11.67□□□□□ -0.54
CCDC66-209ENST00000459746 RAB15P59190 212 aa11.66□□□□□ -0.54
CCDC66-209ENST00000459746 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
CCDC66-209ENST00000459746 UPP2O95045 317 aa11.65□□□□□ -0.54
CCDC66-209ENST00000459746 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
CCDC66-209ENST00000459746 SENP2Q9HC62 589 aa11.65□□□□□ -0.54
CCDC66-209ENST00000459746 ATP13A2Q9NQ11 1180 aa11.65□□□□□ -0.54
CCDC66-209ENST00000459746 SCARF1Q14162 830 aa11.64□□□□□ -0.55
CCDC66-209ENST00000459746 Q6ZVU0 165 aa11.64□□□□□ -0.55
CCDC66-209ENST00000459746 PHTF2Q8N3S3 785 aa11.64□□□□□ -0.55
CCDC66-209ENST00000459746 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
CCDC66-209ENST00000459746 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
CCDC66-209ENST00000459746 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
CCDC66-209ENST00000459746 MAP7D1Q3KQU3 841 aa11.62□□□□□ -0.55
CCDC66-209ENST00000459746 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
CCDC66-209ENST00000459746 MEIOBQ8N635 442 aa11.62□□□□□ -0.55
CCDC66-209ENST00000459746 ZNF784Q8NCA9 323 aaPredicted RBP11.62□□□□□ -0.55
CCDC66-209ENST00000459746 KIFC2Q96AC6 838 aa11.62□□□□□ -0.55
CCDC66-209ENST00000459746 TMPRSS4Q9NRS4 437 aa11.62□□□□□ -0.55
CCDC66-209ENST00000459746 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
CCDC66-209ENST00000459746 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
CCDC66-209ENST00000459746 DACH1Q9UI36 760 aa11.61□□□□□ -0.55
CCDC66-209ENST00000459746 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
CCDC66-209ENST00000459746 PCDHB11Q9Y5F2 797 aa11.61□□□□□ -0.55
CCDC66-209ENST00000459746 TRAK2O60296 914 aa11.6□□□□□ -0.55
CCDC66-209ENST00000459746 LILRA1O75019 489 aa11.6□□□□□ -0.55
CCDC66-209ENST00000459746 HDGFL1Q5TGJ6 251 aa11.6□□□□□ -0.55
CCDC66-209ENST00000459746 SIRT1Q96EB6 747 aa11.6□□□□□ -0.55
CCDC66-209ENST00000459746 LZTS3O60299 673 aaPredicted RBP11.59□□□□□ -0.55
CCDC66-209ENST00000459746 ERVK-9P63128 1117 aa11.59□□□□□ -0.55
CCDC66-209ENST00000459746 USP4Q13107 963 aa11.59□□□□□ -0.55
CCDC66-209ENST00000459746 CC2D2BQ6DHV5 1058 aa11.59□□□□□ -0.55
CCDC66-209ENST00000459746 POM121CA8CG34 1229 aa11.58□□□□□ -0.56
CCDC66-209ENST00000459746 TRIM46Q7Z4K8 759 aa11.58□□□□□ -0.56
CCDC66-209ENST00000459746 MYCP01106 439 aaPredicted RBP11.57□□□□□ -0.56
CCDC66-209ENST00000459746 CBLBQ13191 982 aa11.57□□□□□ -0.56
CCDC66-209ENST00000459746 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
CCDC66-209ENST00000459746 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
CCDC66-209ENST00000459746 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
CCDC66-209ENST00000459746 DOLKQ9UPQ8 538 aa11.57□□□□□ -0.56
CCDC66-209ENST00000459746 TRIM47Q96LD4 638 aa11.56□□□□□ -0.56
CCDC66-209ENST00000459746 CYLDQ9NQC7 956 aa11.56□□□□□ -0.56
CCDC66-209ENST00000459746 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
CCDC66-209ENST00000459746 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
CCDC66-209ENST00000459746 ADH1AP07327 375 aa11.55□□□□□ -0.56
CCDC66-209ENST00000459746 BMP1P13497 986 aa11.55□□□□□ -0.56
CCDC66-209ENST00000459746 ADD1P35611 737 aaKnown RBP11.55□□□□□ -0.56
CCDC66-209ENST00000459746 ZFP42Q96MM3 310 aa11.55□□□□□ -0.56
CCDC66-209ENST00000459746 BMP2P12643 396 aa11.54□□□□□ -0.56
CCDC66-209ENST00000459746 PLPP7Q8NBV4 271 aa11.54□□□□□ -0.56
CCDC66-209ENST00000459746 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
CCDC66-209ENST00000459746 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
CCDC66-209ENST00000459746 GLMNQ92990 594 aa11.53□□□□□ -0.56
CCDC66-209ENST00000459746 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
CCDC66-209ENST00000459746 PURBQ96QR8 312 aaKnown RBP11.53□□□□□ -0.56
CCDC66-209ENST00000459746 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
CCDC66-209ENST00000459746 SPINT1O43278 529 aa11.52□□□□□ -0.57
CCDC66-209ENST00000459746 PTGIRP43119 386 aa11.52□□□□□ -0.57
CCDC66-209ENST00000459746 SKIP12755 728 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms