RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 NNTQ13423 1086 aa6.31□□□□□ -1.4
SCARNA18-201ENST00000459004 NBPF20Q3BBV1 942 aa6.31□□□□□ -1.4
SCARNA18-201ENST00000459004 KCTD15Q96SI1 283 aaPredicted RBP6.31□□□□□ -1.4
SCARNA18-201ENST00000459004 SOX11P35716 441 aa6.3□□□□□ -1.4
SCARNA18-201ENST00000459004 Q6ZNB5 142 aa6.3□□□□□ -1.4
SCARNA18-201ENST00000459004 HPS1Q92902 700 aa6.3□□□□□ -1.4
SCARNA18-201ENST00000459004 ESPNB1AK53 854 aa6.29□□□□□ -1.4
SCARNA18-201ENST00000459004 FSHRP23945 695 aa6.29□□□□□ -1.4
SCARNA18-201ENST00000459004 DHX9Q08211 1270 aaKnown RBP6.29□□□□□ -1.4
SCARNA18-201ENST00000459004 CTC1Q2NKJ3 1217 aa6.29□□□□□ -1.4
SCARNA18-201ENST00000459004 PROSER2Q86WR7 435 aaPredicted RBP6.29□□□□□ -1.4
SCARNA18-201ENST00000459004 FNBP4Q8N3X1 1017 aaPredicted RBP6.29□□□□□ -1.4
SCARNA18-201ENST00000459004 GIGYF1O75420 1035 aaPredicted RBP6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 NR3C2P08235 984 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 MYT1Q01538 1121 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 SEMA3FQ13275 785 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 RNF20Q5VTR2 975 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 CCDC125Q86Z20 511 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 SEPT12Q8IYM1 358 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 CCDC116Q8IYX3 515 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 ZMYND15Q9H091 742 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
SCARNA18-201ENST00000459004 INTS6LQ5JSJ4 861 aaKnown RBP6.27□□□□□ -1.41
SCARNA18-201ENST00000459004 TRAF7Q6Q0C0 670 aa6.27□□□□□ -1.41
SCARNA18-201ENST00000459004 CRIPAKQ8N1N5 446 aa6.27□□□□□ -1.41
SCARNA18-201ENST00000459004 EMILIN1Q9Y6C2 1016 aa6.27□□□□□ -1.41
SCARNA18-201ENST00000459004 AXIN1O15169 862 aa6.26□□□□□ -1.41
SCARNA18-201ENST00000459004 WDR4P57081 412 aaKnown RBP6.26□□□□□ -1.41
SCARNA18-201ENST00000459004 TRIM52Q96A61 297 aa6.26□□□□□ -1.41
SCARNA18-201ENST00000459004 KLF16Q9BXK1 252 aaPredicted RBP6.26□□□□□ -1.41
SCARNA18-201ENST00000459004 ALG2Q9H553 416 aa6.26□□□□□ -1.41
SCARNA18-201ENST00000459004 PGPEP1Q9NXJ5 209 aa6.26□□□□□ -1.41
SCARNA18-201ENST00000459004 CAPN5O15484 640 aaPredicted RBP6.25□□□□□ -1.41
SCARNA18-201ENST00000459004 TIMP2P16035 220 aa6.25□□□□□ -1.41
SCARNA18-201ENST00000459004 PPP1R26Q5T8A7 1209 aaPredicted RBP6.25□□□□□ -1.41
SCARNA18-201ENST00000459004 ERICH6Q7L0X2 663 aa6.25□□□□□ -1.41
SCARNA18-201ENST00000459004 AAASQ9NRG9 546 aa6.25□□□□□ -1.41
SCARNA18-201ENST00000459004 POM121CA8CG34 1229 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 ERVH48-1M5A8F1 160 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 TRAK2O60296 914 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 ZIC2O95409 532 aaPredicted RBP6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 RAB15P59190 212 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 SLFNL1Q499Z3 407 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 C14orf37Q86TY3 774 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 PHTF2Q8N3S3 785 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 ITPKCQ96DU7 683 aa6.24□□□□□ -1.41
SCARNA18-201ENST00000459004 HDGFL1Q5TGJ6 251 aa6.23□□□□□ -1.41
SCARNA18-201ENST00000459004 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
SCARNA18-201ENST00000459004 TMPRSS4Q9NRS4 437 aa6.23□□□□□ -1.41
SCARNA18-201ENST00000459004 LCE2BO14633 110 aa6.22□□□□□ -1.41
SCARNA18-201ENST00000459004 ST8SIA5O15466 376 aa6.22□□□□□ -1.41
SCARNA18-201ENST00000459004 RNF135Q8IUD6 432 aa6.22□□□□□ -1.41
SCARNA18-201ENST00000459004 PCDHB11Q9Y5F2 797 aa6.21□□□□□ -1.42
SCARNA18-201ENST00000459004 MAP7D1Q3KQU3 841 aa6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 CC2D2BQ6DHV5 1058 aa6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 Q6ZVU0 165 aa6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 ZNF784Q8NCA9 323 aaPredicted RBP6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 ADAMTS19Q8TE59 1207 aa6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 GLMNQ92990 594 aa6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 CCDC85AQ96PX6 553 aaPredicted RBP6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 ATP13A2Q9NQ11 1180 aa6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 CHIC2Q9UKJ5 165 aa6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 ZNF777Q9ULD5 760 aaPredicted RBP6.2□□□□□ -1.42
SCARNA18-201ENST00000459004 LILRA1O75019 489 aa6.19□□□□□ -1.42
SCARNA18-201ENST00000459004 ADD1P35611 737 aaKnown RBP6.19□□□□□ -1.42
SCARNA18-201ENST00000459004 ERVK-9P63128 1117 aa6.19□□□□□ -1.42
SCARNA18-201ENST00000459004 CBLBQ13191 982 aa6.19□□□□□ -1.42
SCARNA18-201ENST00000459004 MEIOBQ8N635 442 aa6.19□□□□□ -1.42
SCARNA18-201ENST00000459004 CALR3Q96L12 384 aaKnown RBP6.19□□□□□ -1.42
SCARNA18-201ENST00000459004 DACH1Q9UI36 760 aa6.19□□□□□ -1.42
SCARNA18-201ENST00000459004 UPP2O95045 317 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 SKIP12755 728 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 USP4Q13107 963 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 TSGA10IPQ3SY00 556 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 MRPL14Q6P1L8 145 aaKnown RBP6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 TRIM46Q7Z4K8 759 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 PLPP7Q8NBV4 271 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 NFATC2IPQ8NCF5 419 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 SIRT1Q96EB6 747 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 TSEN34Q9BSV6 310 aaKnown RBP6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 ESF1Q9H501 851 aaKnown RBP6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 CYLDQ9NQC7 956 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 DOLKQ9UPQ8 538 aa6.18□□□□□ -1.42
SCARNA18-201ENST00000459004 PIK3CDO00329 1044 aa6.17□□□□□ -1.42
SCARNA18-201ENST00000459004 LZTS3O60299 673 aaPredicted RBP6.17□□□□□ -1.42
SCARNA18-201ENST00000459004 MYCP01106 439 aaPredicted RBP6.17□□□□□ -1.42
SCARNA18-201ENST00000459004 SCARF1Q14162 830 aa6.17□□□□□ -1.42
SCARNA18-201ENST00000459004 ADH1AP07327 375 aa6.16□□□□□ -1.42
SCARNA18-201ENST00000459004 BMP1P13497 986 aa6.16□□□□□ -1.42
SCARNA18-201ENST00000459004 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
SCARNA18-201ENST00000459004 UCN2Q96RP3 112 aa6.16□□□□□ -1.42
SCARNA18-201ENST00000459004 SENP2Q9HC62 589 aa6.16□□□□□ -1.42
SCARNA18-201ENST00000459004 ATP5J2-PTCD1G3V325 749 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 ATP9BO43861 1147 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 BMP2P12643 396 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 PTGIRP43119 386 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 SCTRP47872 440 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 OXLD1Q5BKU9 147 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms