RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KIF2CQ99661 725 aa17.74■□□□□ 0.43
SCFD1-203ENST00000458591 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
SCFD1-203ENST00000458591 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
SCFD1-203ENST00000458591 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
SCFD1-203ENST00000458591 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
SCFD1-203ENST00000458591 ANKRD26Q9UPS8 1709 aa17.73■□□□□ 0.43
SCFD1-203ENST00000458591 RBM25P49756 843 aaKnown RBP17.73■□□□□ 0.43
SCFD1-203ENST00000458591 CLTCQ00610 1675 aaKnown RBP17.72■□□□□ 0.43
SCFD1-203ENST00000458591 ZNF853P0CG23 659 aa17.72■□□□□ 0.43
SCFD1-203ENST00000458591 TBC1D9Q6ZT07 1266 aa17.72■□□□□ 0.43
SCFD1-203ENST00000458591 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
SCFD1-203ENST00000458591 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
SCFD1-203ENST00000458591 C16orf71Q8IYS4 520 aaPredicted RBP17.71■□□□□ 0.43
SCFD1-203ENST00000458591 NUTM2FA1L443 756 aa17.71■□□□□ 0.42
SCFD1-203ENST00000458591 GNAI1P63096 354 aa17.71■□□□□ 0.42
SCFD1-203ENST00000458591 GOLGA6L3A6NEY3 463 aa17.7■□□□□ 0.42
SCFD1-203ENST00000458591 WASLO00401 505 aaPredicted RBP17.7■□□□□ 0.42
SCFD1-203ENST00000458591 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
SCFD1-203ENST00000458591 IFT57Q9NWB7 429 aa17.7■□□□□ 0.42
SCFD1-203ENST00000458591 DDIT3P35638 169 aa17.69■□□□□ 0.42
SCFD1-203ENST00000458591 METP08581 1390 aa17.69■□□□□ 0.42
SCFD1-203ENST00000458591 BRPF1P55201 1214 aaPredicted RBP17.69■□□□□ 0.42
SCFD1-203ENST00000458591 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
SCFD1-203ENST00000458591 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
SCFD1-203ENST00000458591 KIF20BQ96Q89 1820 aa17.68■□□□□ 0.42
SCFD1-203ENST00000458591 FSD2A1L4K1 749 aa17.68■□□□□ 0.42
SCFD1-203ENST00000458591 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
SCFD1-203ENST00000458591 ABCC4O15439 1325 aa17.68■□□□□ 0.42
SCFD1-203ENST00000458591 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
SCFD1-203ENST00000458591 APBB1O00213 710 aa17.67■□□□□ 0.42
SCFD1-203ENST00000458591 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
SCFD1-203ENST00000458591 GSPT1P15170 499 aaKnown RBP17.67■□□□□ 0.42
SCFD1-203ENST00000458591 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
SCFD1-203ENST00000458591 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
SCFD1-203ENST00000458591 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
SCFD1-203ENST00000458591 CPS1P31327 1500 aa17.67■□□□□ 0.42
SCFD1-203ENST00000458591 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
SCFD1-203ENST00000458591 SOX12O15370 315 aa17.67■□□□□ 0.42
SCFD1-203ENST00000458591 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
SCFD1-203ENST00000458591 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
SCFD1-203ENST00000458591 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
SCFD1-203ENST00000458591 COG3Q96JB2 828 aa17.66■□□□□ 0.42
SCFD1-203ENST00000458591 A2ML1A8K2U0 1454 aa17.66■□□□□ 0.42
SCFD1-203ENST00000458591 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
SCFD1-203ENST00000458591 MCM10Q7L590 875 aa17.66■□□□□ 0.42
SCFD1-203ENST00000458591 SNX21Q969T3 373 aa17.66■□□□□ 0.42
SCFD1-203ENST00000458591 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
SCFD1-203ENST00000458591 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
SCFD1-203ENST00000458591 PIK3R4Q99570 1358 aa17.65■□□□□ 0.42
SCFD1-203ENST00000458591 ZNF428Q96B54 188 aa17.64■□□□□ 0.41
SCFD1-203ENST00000458591 MIS18AQ9NYP9 233 aa17.64■□□□□ 0.41
SCFD1-203ENST00000458591 ATP7BP35670 1465 aa17.64■□□□□ 0.41
SCFD1-203ENST00000458591 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
SCFD1-203ENST00000458591 SULT6B1Q6IMI4 303 aa17.64■□□□□ 0.41
SCFD1-203ENST00000458591 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
SCFD1-203ENST00000458591 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
SCFD1-203ENST00000458591 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
SCFD1-203ENST00000458591 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
SCFD1-203ENST00000458591 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
SCFD1-203ENST00000458591 GAS2L3Q86XJ1 694 aa17.62■□□□□ 0.41
SCFD1-203ENST00000458591 EDC4Q6P2E9 1401 aaKnown RBP17.62■□□□□ 0.41
SCFD1-203ENST00000458591 SSFA2P28290 1259 aa17.61■□□□□ 0.41
SCFD1-203ENST00000458591 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
SCFD1-203ENST00000458591 CCDC61Q9Y6R9 512 aa17.61■□□□□ 0.41
SCFD1-203ENST00000458591 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
SCFD1-203ENST00000458591 RAB3GAP1Q15042 981 aa17.6■□□□□ 0.41
SCFD1-203ENST00000458591 K7ELQ4 463 aaPredicted RBP17.59■□□□□ 0.41
SCFD1-203ENST00000458591 HSP90AB2PQ58FF8 381 aa17.59■□□□□ 0.41
SCFD1-203ENST00000458591 CDC45O75419 566 aa17.59■□□□□ 0.41
SCFD1-203ENST00000458591 KNDC1Q76NI1 1749 aa17.59■□□□□ 0.41
SCFD1-203ENST00000458591 RIMBP3CA6NJZ7 1639 aa17.59■□□□□ 0.41
SCFD1-203ENST00000458591 RIMBP3BA6NNM3 1639 aa17.59■□□□□ 0.41
SCFD1-203ENST00000458591 RIMBP3Q9UFD9 1639 aa17.59■□□□□ 0.41
SCFD1-203ENST00000458591 CDK12Q9NYV4 1490 aaPredicted RBP17.58■□□□□ 0.41
SCFD1-203ENST00000458591 DDX11L8A8MPP1 907 aa17.58■□□□□ 0.41
SCFD1-203ENST00000458591 FOXO3O43524 673 aa17.58■□□□□ 0.41
SCFD1-203ENST00000458591 DCTPP1Q9H773 170 aa17.58■□□□□ 0.41
SCFD1-203ENST00000458591 GRPEL1Q9HAV7 217 aa17.58■□□□□ 0.4
SCFD1-203ENST00000458591 MEIS3Q99687 375 aa17.57■□□□□ 0.4
SCFD1-203ENST00000458591 DLC1Q96QB1 1528 aa17.57■□□□□ 0.4
SCFD1-203ENST00000458591 AATKQ6ZMQ8 1374 aa17.57■□□□□ 0.4
SCFD1-203ENST00000458591 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
SCFD1-203ENST00000458591 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
SCFD1-203ENST00000458591 DLG5Q8TDM6 1919 aa17.56■□□□□ 0.4
SCFD1-203ENST00000458591 TTC22Q5TAA0 569 aa17.55■□□□□ 0.4
SCFD1-203ENST00000458591 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
SCFD1-203ENST00000458591 F6X3S4 739 aa17.55■□□□□ 0.4
SCFD1-203ENST00000458591 INTS3Q68E01 1043 aaKnown RBP17.55■□□□□ 0.4
SCFD1-203ENST00000458591 CEP85Q6P2H3 762 aa17.55■□□□□ 0.4
SCFD1-203ENST00000458591 G2E3Q7L622 706 aa17.55■□□□□ 0.4
SCFD1-203ENST00000458591 RGS12O14924 1447 aa17.55■□□□□ 0.4
SCFD1-203ENST00000458591 MSH6P52701 1360 aa17.54■□□□□ 0.4
SCFD1-203ENST00000458591 MRE11P49959 708 aa17.54■□□□□ 0.4
SCFD1-203ENST00000458591 PKP1Q13835 747 aa17.54■□□□□ 0.4
SCFD1-203ENST00000458591 ANKRD44Q8N8A2 993 aa17.54■□□□□ 0.4
SCFD1-203ENST00000458591 TSPOAP1O95153 1857 aa17.53■□□□□ 0.4
SCFD1-203ENST00000458591 CHL1O00533 1208 aa17.53■□□□□ 0.4
SCFD1-203ENST00000458591 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
SCFD1-203ENST00000458591 SDSP20132 328 aa17.53■□□□□ 0.4
SCFD1-203ENST00000458591 NRXN3Q9Y4C0 1643 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms