RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 MAP3K10Q02779 954 aa7.75□□□□□ -1.17
HMGB4-202ENST00000458277 PDE4CQ08493 712 aa7.75□□□□□ -1.17
HMGB4-202ENST00000458277 RTL5Q5HYW3 569 aaPredicted RBP7.75□□□□□ -1.17
HMGB4-202ENST00000458277 Q8N3U1 123 aa7.75□□□□□ -1.17
HMGB4-202ENST00000458277 DCAF5Q96JK2 942 aa7.75□□□□□ -1.17
HMGB4-202ENST00000458277 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
HMGB4-202ENST00000458277 GRM5P41594 1212 aa7.74□□□□□ -1.17
HMGB4-202ENST00000458277 SV2AQ7L0J3 742 aa7.74□□□□□ -1.17
HMGB4-202ENST00000458277 GPIHBP1Q8IV16 184 aa7.74□□□□□ -1.17
HMGB4-202ENST00000458277 TSEN34Q9BSV6 310 aaKnown RBP7.74□□□□□ -1.17
HMGB4-202ENST00000458277 K7ELQ4 463 aaPredicted RBP7.73□□□□□ -1.17
HMGB4-202ENST00000458277 ADAMTS2O95450 1211 aa7.73□□□□□ -1.17
HMGB4-202ENST00000458277 PROCP04070 461 aa7.73□□□□□ -1.17
HMGB4-202ENST00000458277 ITGB2P05107 769 aa7.73□□□□□ -1.17
HMGB4-202ENST00000458277 AGERQ15109 404 aa7.73□□□□□ -1.17
HMGB4-202ENST00000458277 PRR7Q8TB68 274 aa7.73□□□□□ -1.17
HMGB4-202ENST00000458277 ITGA6P23229 1130 aa7.72□□□□□ -1.17
HMGB4-202ENST00000458277 TAF7LQ5H9L4 462 aa7.72□□□□□ -1.17
HMGB4-202ENST00000458277 CNTNAP5Q8WYK1 1306 aa7.72□□□□□ -1.17
HMGB4-202ENST00000458277 SLC35F4A4IF30 521 aa7.7□□□□□ -1.18
HMGB4-202ENST00000458277 KRTAP1-3Q8IUG1 177 aa7.7□□□□□ -1.18
HMGB4-202ENST00000458277 USP35Q9P2H5 1018 aa7.7□□□□□ -1.18
HMGB4-202ENST00000458277 PHF20L1A8MW92 1017 aa7.69□□□□□ -1.18
HMGB4-202ENST00000458277 SUPT5HO00267 1087 aaKnown RBP7.69□□□□□ -1.18
HMGB4-202ENST00000458277 CELA2BP08218 269 aaPredicted RBP7.69□□□□□ -1.18
HMGB4-202ENST00000458277 FSHRP23945 695 aa7.69□□□□□ -1.18
HMGB4-202ENST00000458277 MAP2K5Q13163 448 aa7.69□□□□□ -1.18
HMGB4-202ENST00000458277 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
HMGB4-202ENST00000458277 CDK11AQ9UQ88 783 aaPredicted RBP7.69□□□□□ -1.18
HMGB4-202ENST00000458277 UNC13AQ9UPW8 1703 aa7.69□□□□□ -1.18
HMGB4-202ENST00000458277 NDUFV2P19404 249 aa7.68□□□□□ -1.18
HMGB4-202ENST00000458277 FGD1P98174 961 aa7.68□□□□□ -1.18
HMGB4-202ENST00000458277 SH3RF1Q7Z6J0 888 aa7.68□□□□□ -1.18
HMGB4-202ENST00000458277 ENAMQ9NRM1 1142 aa7.68□□□□□ -1.18
HMGB4-202ENST00000458277 FAM217BQ9NTX9 383 aaPredicted RBP7.68□□□□□ -1.18
HMGB4-202ENST00000458277 BICRAQ9NZM4 1560 aa7.67□□□□□ -1.18
HMGB4-202ENST00000458277 GPCPD1Q9NPB8 672 aa7.67□□□□□ -1.18
HMGB4-202ENST00000458277 IRF6O14896 467 aa7.66□□□□□ -1.18
HMGB4-202ENST00000458277 SRSF11Q05519 484 aaKnown RBP7.66□□□□□ -1.18
HMGB4-202ENST00000458277 DESI1Q6ICB0 168 aa7.66□□□□□ -1.18
HMGB4-202ENST00000458277 CCDC136Q96JN2 1154 aa7.66□□□□□ -1.18
HMGB4-202ENST00000458277 MAP10Q9P2G4 905 aa7.66□□□□□ -1.18
HMGB4-202ENST00000458277 MTMR2Q13614 643 aa7.65□□□□□ -1.18
HMGB4-202ENST00000458277 BPHLQ86WA6 291 aaPredicted RBP7.65□□□□□ -1.18
HMGB4-202ENST00000458277 HOMEZQ8IX15 550 aa7.65□□□□□ -1.18
HMGB4-202ENST00000458277 BEND7Q8N7W2 519 aaPredicted RBP7.65□□□□□ -1.18
HMGB4-202ENST00000458277 EMILIN1Q9Y6C2 1016 aa7.65□□□□□ -1.18
HMGB4-202ENST00000458277 CBLBQ13191 982 aa7.64□□□□□ -1.19
HMGB4-202ENST00000458277 PODNQ7Z5L7 613 aa7.64□□□□□ -1.19
HMGB4-202ENST00000458277 ZMYND15Q9H091 742 aa7.64□□□□□ -1.19
HMGB4-202ENST00000458277 MOXD2PA6NHM9 499 aa7.63□□□□□ -1.19
HMGB4-202ENST00000458277 SPINT1O43278 529 aa7.63□□□□□ -1.19
HMGB4-202ENST00000458277 FURINP09958 794 aa7.63□□□□□ -1.19
HMGB4-202ENST00000458277 NCLP19338 710 aaKnown RBP7.63□□□□□ -1.19
HMGB4-202ENST00000458277 CLCN1P35523 988 aa7.63□□□□□ -1.19
HMGB4-202ENST00000458277 BAG6P46379 1132 aa7.63□□□□□ -1.19
HMGB4-202ENST00000458277 VASH1Q7L8A9 365 aaPredicted RBP7.63□□□□□ -1.19
HMGB4-202ENST00000458277 CCDC116Q8IYX3 515 aa7.63□□□□□ -1.19
HMGB4-202ENST00000458277 NEDD1Q8NHV4 660 aa7.63□□□□□ -1.19
HMGB4-202ENST00000458277 LYPD8Q6UX82 237 aa7.62□□□□□ -1.19
HMGB4-202ENST00000458277 KRI1Q8N9T8 703 aaKnown RBP7.62□□□□□ -1.19
HMGB4-202ENST00000458277 SPIRE2Q8WWL2 714 aa7.62□□□□□ -1.19
HMGB4-202ENST00000458277 SCRIBQ14160 1630 aa7.62□□□□□ -1.19
HMGB4-202ENST00000458277 SPDYE5A6NIY4 337 aa7.61□□□□□ -1.19
HMGB4-202ENST00000458277 RRP9O43818 475 aaKnown RBP7.61□□□□□ -1.19
HMGB4-202ENST00000458277 GAS6Q14393 721 aa7.61□□□□□ -1.19
HMGB4-202ENST00000458277 NOP58Q9Y2X3 529 aaKnown RBP7.61□□□□□ -1.19
HMGB4-202ENST00000458277 SHROOM4Q9ULL8 1493 aa7.61□□□□□ -1.19
HMGB4-202ENST00000458277 CTSOP43234 321 aaPredicted RBP7.6□□□□□ -1.19
HMGB4-202ENST00000458277 F12P00748 615 aaPredicted RBP7.59□□□□□ -1.19
HMGB4-202ENST00000458277 AAMPQ13685 434 aa7.59□□□□□ -1.19
HMGB4-202ENST00000458277 VSIG10Q8N0Z9 540 aa7.59□□□□□ -1.19
HMGB4-202ENST00000458277 CCDC102AQ96A19 550 aa7.59□□□□□ -1.19
HMGB4-202ENST00000458277 MINK1Q8N4C8 1332 aaPredicted RBP7.58□□□□□ -1.2
HMGB4-202ENST00000458277 SENP3-EIF4A1A0A087X0R7 540 aa7.58□□□□□ -1.2
HMGB4-202ENST00000458277 Q6ZVU0 165 aa7.58□□□□□ -1.2
HMGB4-202ENST00000458277 AGBL1Q96MI9 1066 aa7.58□□□□□ -1.2
HMGB4-202ENST00000458277 INSM2Q96T92 566 aaPredicted RBP7.58□□□□□ -1.2
HMGB4-202ENST00000458277 MAGEB6P1A0A0J9YX57 407 aa7.57□□□□□ -1.2
HMGB4-202ENST00000458277 PPP1R26Q5T8A7 1209 aaPredicted RBP7.57□□□□□ -1.2
HMGB4-202ENST00000458277 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
HMGB4-202ENST00000458277 FAM43AQ8N2R8 423 aa7.57□□□□□ -1.2
HMGB4-202ENST00000458277 POLMQ9NP87 494 aaPredicted RBP7.57□□□□□ -1.2
HMGB4-202ENST00000458277 PGPEP1Q9NXJ5 209 aa7.57□□□□□ -1.2
HMGB4-202ENST00000458277 MAP4K5Q9Y4K4 846 aa7.57□□□□□ -1.2
HMGB4-202ENST00000458277 LOC105371045A0A1W2PR82 267 aa7.56□□□□□ -1.2
HMGB4-202ENST00000458277 CFAP99D6REC4 459 aa7.56□□□□□ -1.2
HMGB4-202ENST00000458277 RELBQ01201 579 aa7.56□□□□□ -1.2
HMGB4-202ENST00000458277 C1QTNF2Q9BXJ5 285 aa7.56□□□□□ -1.2
HMGB4-202ENST00000458277 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
HMGB4-202ENST00000458277 BCRP11274 1271 aa7.55□□□□□ -1.2
HMGB4-202ENST00000458277 IGF1RP08069 1367 aa7.55□□□□□ -1.2
HMGB4-202ENST00000458277 WASHC2CQ9Y4E1 1318 aa7.54□□□□□ -1.2
HMGB4-202ENST00000458277 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
HMGB4-202ENST00000458277 GPR25O00155 361 aa7.54□□□□□ -1.2
HMGB4-202ENST00000458277 SSTR3P32745 418 aaPredicted RBP7.54□□□□□ -1.2
HMGB4-202ENST00000458277 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
HMGB4-202ENST00000458277 MBIPQ9NS73 344 aa7.54□□□□□ -1.2
HMGB4-202ENST00000458277 PPM1GO15355 546 aaPredicted RBP7.53□□□□□ -1.2
HMGB4-202ENST00000458277 RBM10P98175 930 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms