RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 UQCRHP07919 91 aa23.33■■□□□ 1.32
SNX27-204ENST00000458013 LEKR1Q6ZMV7 388 aa23.33■■□□□ 1.32
SNX27-204ENST00000458013 RRS1Q15050 365 aaKnown RBP23.32■■□□□ 1.32
SNX27-204ENST00000458013 CCDC181Q5TID7 509 aa23.32■■□□□ 1.32
SNX27-204ENST00000458013 LRRCC1Q9C099 1032 aa23.32■■□□□ 1.32
SNX27-204ENST00000458013 CWC15Q9P013 229 aaKnown RBP23.32■■□□□ 1.32
SNX27-204ENST00000458013 SLC3A2P08195 630 aaKnown RBP23.32■■□□□ 1.32
SNX27-204ENST00000458013 NUTM1Q86Y26 1132 aa23.32■■□□□ 1.32
SNX27-204ENST00000458013 MATR3P43243 847 aaKnown RBP eCLIP23.31■■□□□ 1.322e-6■□□□□ 11.3
SNX27-204ENST00000458013 HDGFL1Q5TGJ6 251 aa23.31■■□□□ 1.32
SNX27-204ENST00000458013 PPFIBP1Q86W92 1011 aa23.31■■□□□ 1.32
SNX27-204ENST00000458013 DDX11Q96FC9 970 aa23.31■■□□□ 1.32
SNX27-204ENST00000458013 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
SNX27-204ENST00000458013 WWC2Q6AWC2 1192 aa23.3■■□□□ 1.32
SNX27-204ENST00000458013 PLEKHO1Q53GL0 409 aaPredicted RBP23.3■■□□□ 1.32
SNX27-204ENST00000458013 RABEP1Q15276 862 aa23.3■■□□□ 1.32
SNX27-204ENST00000458013 SLC12A5Q9H2X9 1139 aa23.29■■□□□ 1.32
SNX27-204ENST00000458013 MYO6Q9UM54 1294 aa23.29■■□□□ 1.32
SNX27-204ENST00000458013 ARHGAP5Q13017 1502 aa23.29■■□□□ 1.32
SNX27-204ENST00000458013 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
SNX27-204ENST00000458013 JAKMIP1Q96N16 626 aaKnown RBP23.29■■□□□ 1.32
SNX27-204ENST00000458013 K7ELQ4 463 aaPredicted RBP23.29■■□□□ 1.32
SNX27-204ENST00000458013 LARP1BQ659C4 914 aaKnown RBP23.29■■□□□ 1.32
SNX27-204ENST00000458013 CDK19Q9BWU1 502 aa23.29■■□□□ 1.32
SNX27-204ENST00000458013 GAS2L2Q8NHY3 880 aa23.28■■□□□ 1.32
SNX27-204ENST00000458013 SMARCA5O60264 1052 aaPredicted RBP23.28■■□□□ 1.32
SNX27-204ENST00000458013 GRPEL1Q9HAV7 217 aa23.27■■□□□ 1.32
SNX27-204ENST00000458013 PDRG1Q9NUG6 133 aa23.27■■□□□ 1.32
SNX27-204ENST00000458013 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
SNX27-204ENST00000458013 SEPT7Q16181 437 aaKnown RBP23.27■■□□□ 1.32
SNX27-204ENST00000458013 CCDC192P0DO97 292 aa23.27■■□□□ 1.31
SNX27-204ENST00000458013 ZNHIT6Q9NWK9 470 aaKnown RBP23.27■■□□□ 1.31
SNX27-204ENST00000458013 USP5P45974 858 aa23.26■■□□□ 1.31
SNX27-204ENST00000458013 CABP1Q9NZU7 370 aa23.26■■□□□ 1.31
SNX27-204ENST00000458013 MBD3O95983 291 aa23.26■■□□□ 1.31
SNX27-204ENST00000458013 TAF3Q5VWG9 929 aa23.26■■□□□ 1.31
SNX27-204ENST00000458013 BRD4O60885 1362 aaPredicted RBP23.26■■□□□ 1.31
SNX27-204ENST00000458013 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.26■■□□□ 1.31
SNX27-204ENST00000458013 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
SNX27-204ENST00000458013 TOM1L2Q6ZVM7 507 aa23.25■■□□□ 1.31
SNX27-204ENST00000458013 HIP1O00291 1037 aa23.25■■□□□ 1.31
SNX27-204ENST00000458013 SPATA32Q96LK8 384 aa23.25■■□□□ 1.31
SNX27-204ENST00000458013 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
SNX27-204ENST00000458013 SMG6Q86US8 1419 aaKnown RBP23.24■■□□□ 1.31
SNX27-204ENST00000458013 LARP6Q9BRS8 491 aaKnown RBP23.24■■□□□ 1.31
SNX27-204ENST00000458013 GPRASP1Q5JY77 1395 aa23.24■■□□□ 1.31
SNX27-204ENST00000458013 CHMP4BP1P59074 171 aa23.24■■□□□ 1.31
SNX27-204ENST00000458013 GCC1Q96CN9 775 aa23.24■■□□□ 1.31
SNX27-204ENST00000458013 PRDM10Q9NQV6 1147 aa23.24■■□□□ 1.31
SNX27-204ENST00000458013 ERC1Q8IUD2 1116 aa23.24■■□□□ 1.31
SNX27-204ENST00000458013 MYOM3Q5VTT5 1437 aa23.24■■□□□ 1.31
SNX27-204ENST00000458013 ZSCAN29Q8IWY8 852 aaPredicted RBP23.24■■□□□ 1.31
SNX27-204ENST00000458013 CHD1LQ86WJ1 897 aa23.23■■□□□ 1.31
SNX27-204ENST00000458013 SSR1P43307 286 aaKnown RBP23.23■■□□□ 1.31
SNX27-204ENST00000458013 LRRFIP2Q9Y608 721 aaKnown RBP23.23■■□□□ 1.31
SNX27-204ENST00000458013 TATP17735 454 aaPredicted RBP23.23■■□□□ 1.31
SNX27-204ENST00000458013 GOLGA6L10A6NI86 522 aa23.23■■□□□ 1.31
SNX27-204ENST00000458013 MPHOSPH10O00566 681 aaKnown RBP23.22■■□□□ 1.31
SNX27-204ENST00000458013 FILIP1Q7Z7B0 1213 aa23.22■■□□□ 1.31
SNX27-204ENST00000458013 AFAP1Q8N556 730 aa23.22■■□□□ 1.31
SNX27-204ENST00000458013 TDO2P48775 406 aa23.22■■□□□ 1.31
SNX27-204ENST00000458013 CCP110O43303 1012 aa23.21■■□□□ 1.31
SNX27-204ENST00000458013 CASTP20810 708 aaKnown RBP23.21■■□□□ 1.31
SNX27-204ENST00000458013 GNL3LQ9NVN8 582 aaKnown RBP23.21■■□□□ 1.31
SNX27-204ENST00000458013 DHX8Q14562 1220 aaKnown RBP23.21■■□□□ 1.31
SNX27-204ENST00000458013 RAI14Q9P0K7 980 aa23.21■■□□□ 1.31
SNX27-204ENST00000458013 CCDC112Q8NEF3 446 aa23.21■■□□□ 1.31
SNX27-204ENST00000458013 SYCE3A1L190 88 aa23.2■■□□□ 1.31
SNX27-204ENST00000458013 BTBD11A6QL63 1104 aa23.2■■□□□ 1.31
SNX27-204ENST00000458013 SRGAP3O43295 1099 aa23.2■■□□□ 1.31
SNX27-204ENST00000458013 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.31
SNX27-204ENST00000458013 TRIM22Q8IYM9 498 aa23.2■■□□□ 1.3
SNX27-204ENST00000458013 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
SNX27-204ENST00000458013 PROSER2Q86WR7 435 aaPredicted RBP23.2■■□□□ 1.3
SNX27-204ENST00000458013 CCDC57Q2TAC2 916 aa23.2■■□□□ 1.3
SNX27-204ENST00000458013 ERLIN2O94905 339 aa23.19■■□□□ 1.3
SNX27-204ENST00000458013 MPHOSPH8Q99549 860 aa23.19■■□□□ 1.3
SNX27-204ENST00000458013 PDCP20941 246 aa23.19■■□□□ 1.3
SNX27-204ENST00000458013 PIP4K2BP78356 416 aa23.19■■□□□ 1.3
SNX27-204ENST00000458013 CCDC102AQ96A19 550 aa23.19■■□□□ 1.3
SNX27-204ENST00000458013 DNA2P51530 1060 aa23.18■■□□□ 1.3
SNX27-204ENST00000458013 GUCY1B3Q02153 619 aa23.18■■□□□ 1.3
SNX27-204ENST00000458013 ANKRD50Q9ULJ7 1429 aa23.18■■□□□ 1.3
SNX27-204ENST00000458013 AEBP1Q8IUX7 1158 aa23.18■■□□□ 1.3
SNX27-204ENST00000458013 THUMPD2Q9BTF0 503 aaKnown RBP23.18■■□□□ 1.3
SNX27-204ENST00000458013 SRCIN1Q9C0H9 1055 aa23.18■■□□□ 1.3
SNX27-204ENST00000458013 FERMT3Q86UX7 667 aa23.17■■□□□ 1.3
SNX27-204ENST00000458013 KRT85P78386 507 aa23.17■■□□□ 1.3
SNX27-204ENST00000458013 CCDC66A2RUB6 948 aa23.17■■□□□ 1.3
SNX27-204ENST00000458013 WDR33Q9C0J8 1336 aaKnown RBP23.17■■□□□ 1.3
SNX27-204ENST00000458013 ZNF76P36508 570 aa23.17■■□□□ 1.3
SNX27-204ENST00000458013 IDH1O75874 414 aaKnown RBP23.16■■□□□ 1.3
SNX27-204ENST00000458013 CCDC83Q8IWF9 413 aa23.16■■□□□ 1.3
SNX27-204ENST00000458013 STIM1Q13586 685 aa23.16■■□□□ 1.3
SNX27-204ENST00000458013 MVPQ14764 893 aaKnown RBP23.16■■□□□ 1.3
SNX27-204ENST00000458013 NACAP1Q9BZK3 213 aa23.16■■□□□ 1.3
SNX27-204ENST00000458013 MCM2P49736 904 aa23.16■■□□□ 1.3
SNX27-204ENST00000458013 SLC4A8Q2Y0W8 1093 aa23.16■■□□□ 1.3
SNX27-204ENST00000458013 CUX1P39880 1505 aa23.15■■□□□ 1.3
SNX27-204ENST00000458013 KIAA0754O94854 1291 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms