RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 ABTB2Q8N961 1025 aa26.5■■□□□ 1.83
TMED4-203ENST00000457408 PANK1Q8TE04 598 aa26.5■■□□□ 1.83
TMED4-203ENST00000457408 MAP3K19Q56UN5 1328 aa26.49■■□□□ 1.83
TMED4-203ENST00000457408 NALCNQ8IZF0 1738 aa26.49■■□□□ 1.83
TMED4-203ENST00000457408 FMN2Q9NZ56 1722 aa26.48■■□□□ 1.83
TMED4-203ENST00000457408 AMPHP49418 695 aa26.48■■□□□ 1.83
TMED4-203ENST00000457408 USP31Q70CQ4 1352 aa26.47■■□□□ 1.83
TMED4-203ENST00000457408 PLEKHG5O94827 1062 aa26.47■■□□□ 1.83
TMED4-203ENST00000457408 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
TMED4-203ENST00000457408 TNNQ9UQP3 1299 aa26.46■■□□□ 1.83
TMED4-203ENST00000457408 PROSER2Q86WR7 435 aaPredicted RBP26.45■■□□□ 1.83
TMED4-203ENST00000457408 CLUAP1Q96AJ1 413 aa26.45■■□□□ 1.82
TMED4-203ENST00000457408 IL16Q14005 1332 aa26.44■■□□□ 1.82
TMED4-203ENST00000457408 PSME1Q06323 249 aa26.44■■□□□ 1.82
TMED4-203ENST00000457408 SKAP1Q86WV1 359 aa26.44■■□□□ 1.82
TMED4-203ENST00000457408 FAM83GA6ND36 823 aa26.43■■□□□ 1.82
TMED4-203ENST00000457408 PEAK1Q9H792 1746 aa26.42■■□□□ 1.82
TMED4-203ENST00000457408 ADGRL3Q9HAR2 1447 aa26.42■■□□□ 1.82
TMED4-203ENST00000457408 DCTN1Q14203 1278 aa26.42■■□□□ 1.82
TMED4-203ENST00000457408 XPCQ01831 940 aaPredicted RBP26.42■■□□□ 1.82
TMED4-203ENST00000457408 PDE3AQ14432 1141 aa26.42■■□□□ 1.82
TMED4-203ENST00000457408 ORAI2Q96SN7 254 aa26.42■■□□□ 1.82
TMED4-203ENST00000457408 PIK3C2AO00443 1686 aa26.41■■□□□ 1.82
TMED4-203ENST00000457408 SMC4Q9NTJ3 1288 aa26.41■■□□□ 1.82
TMED4-203ENST00000457408 HSPA2P54652 639 aa26.4■■□□□ 1.82
TMED4-203ENST00000457408 RLBP1P12271 317 aa26.38■■□□□ 1.81
TMED4-203ENST00000457408 ZBTB7CA1YPR0 619 aa26.38■■□□□ 1.81
TMED4-203ENST00000457408 FOXO3O43524 673 aa26.38■■□□□ 1.81
TMED4-203ENST00000457408 SSH1Q8WYL5 1049 aa26.38■■□□□ 1.81
TMED4-203ENST00000457408 LTV1Q96GA3 475 aaPredicted RBP26.38■■□□□ 1.81
TMED4-203ENST00000457408 SBNO1A3KN83 1393 aa26.37■■□□□ 1.81
TMED4-203ENST00000457408 FLT4P35916 1363 aa26.37■■□□□ 1.81
TMED4-203ENST00000457408 LMOD2Q6P5Q4 547 aa26.36■■□□□ 1.81
TMED4-203ENST00000457408 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
TMED4-203ENST00000457408 MSH5O43196 834 aa26.35■■□□□ 1.81
TMED4-203ENST00000457408 CT47B1P0C2W7 299 aaPredicted RBP26.35■■□□□ 1.81
TMED4-203ENST00000457408 CALD1Q05682 793 aaKnown RBP26.34■■□□□ 1.81
TMED4-203ENST00000457408 LMOD3Q0VAK6 560 aa26.34■■□□□ 1.81
TMED4-203ENST00000457408 GNAI1P63096 354 aa26.33■■□□□ 1.81
TMED4-203ENST00000457408 ZKSCAN2Q63HK3 967 aa26.33■■□□□ 1.81
TMED4-203ENST00000457408 EYA1Q99502 592 aa26.33■■□□□ 1.81
TMED4-203ENST00000457408 FTSJ3Q8IY81 847 aaKnown RBP26.32■■□□□ 1.8
TMED4-203ENST00000457408 HOXC9P31274 260 aa26.32■■□□□ 1.8
TMED4-203ENST00000457408 MBIPQ9NS73 344 aa26.32■■□□□ 1.8
TMED4-203ENST00000457408 CENPQQ7L2Z9 268 aaPredicted RBP26.31■■□□□ 1.8
TMED4-203ENST00000457408 MCM10Q7L590 875 aa26.31■■□□□ 1.8
TMED4-203ENST00000457408 KDM2BQ8NHM5 1336 aa26.31■■□□□ 1.8
TMED4-203ENST00000457408 IFT57Q9NWB7 429 aa26.31■■□□□ 1.8
TMED4-203ENST00000457408 NOB1Q9ULX3 412 aaKnown RBP26.3■■□□□ 1.8
TMED4-203ENST00000457408 DLG5Q8TDM6 1919 aa26.3■■□□□ 1.8
TMED4-203ENST00000457408 TSPYL6Q8N831 410 aa26.3■■□□□ 1.8
TMED4-203ENST00000457408 TCERG1O14776 1098 aaKnown RBP26.29■■□□□ 1.8
TMED4-203ENST00000457408 DZIP1LQ8IYY4 767 aaKnown RBP26.28■■□□□ 1.8
TMED4-203ENST00000457408 CFAP44Q96MT7 982 aa26.27■■□□□ 1.8
TMED4-203ENST00000457408 C19orf44Q9H6X5 657 aa26.27■■□□□ 1.8
TMED4-203ENST00000457408 IGHDP01880 384 aa26.26■■□□□ 1.79
TMED4-203ENST00000457408 TRIM27P14373 513 aa26.26■■□□□ 1.79
TMED4-203ENST00000457408 ARHGEF10O15013 1369 aa26.26■■□□□ 1.79
TMED4-203ENST00000457408 ZNF853P0CG23 659 aa26.26■■□□□ 1.79
TMED4-203ENST00000457408 MTHFSDQ2M296 383 aaKnown RBP26.25■■□□□ 1.79
TMED4-203ENST00000457408 USHBP1Q8N6Y0 703 aa26.25■■□□□ 1.79
TMED4-203ENST00000457408 MARF1Q9Y4F3 1742 aaKnown RBP26.24■■□□□ 1.79
TMED4-203ENST00000457408 NWD1Q149M9 1564 aa26.23■■□□□ 1.79
TMED4-203ENST00000457408 VAMP4O75379 141 aa26.23■■□□□ 1.79
TMED4-203ENST00000457408 ATF3P18847 181 aa26.23■■□□□ 1.79
TMED4-203ENST00000457408 ATF7IPQ6VMQ6 1270 aa26.23■■□□□ 1.79
TMED4-203ENST00000457408 C8orf58Q8NAV2 365 aa26.23■■□□□ 1.79
TMED4-203ENST00000457408 IGSF1Q8N6C5 1336 aa26.23■■□□□ 1.79
TMED4-203ENST00000457408 RGPD1P0DJD0 1748 aa26.22■■□□□ 1.79
TMED4-203ENST00000457408 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
TMED4-203ENST00000457408 MVPQ14764 893 aaKnown RBP26.22■■□□□ 1.79
TMED4-203ENST00000457408 TWISTNBQ3B726 338 aaPredicted RBP26.22■■□□□ 1.79
TMED4-203ENST00000457408 KRT28Q7Z3Y7 464 aa26.22■■□□□ 1.79
TMED4-203ENST00000457408 ITPRIPQ8IWB1 547 aa26.22■■□□□ 1.79
TMED4-203ENST00000457408 RTF1Q92541 710 aaKnown RBP26.2■■□□□ 1.79
TMED4-203ENST00000457408 DDX17Q92841 729 aaKnown RBP26.2■■□□□ 1.79
TMED4-203ENST00000457408 MIS18AQ9NYP9 233 aa26.2■■□□□ 1.79
TMED4-203ENST00000457408 RGS3P49796 1198 aa26.2■■□□□ 1.78
TMED4-203ENST00000457408 ALDH1L2Q3SY69 923 aa26.2■■□□□ 1.78
TMED4-203ENST00000457408 PCDHB15Q9Y5E8 787 aa26.2■■□□□ 1.78
TMED4-203ENST00000457408 MS4A1P11836 297 aa26.19■■□□□ 1.78
TMED4-203ENST00000457408 KRT24Q2M2I5 525 aa26.19■■□□□ 1.78
TMED4-203ENST00000457408 KIF16BQ96L93 1317 aa26.18■■□□□ 1.78
TMED4-203ENST00000457408 IPO8O15397 1037 aaKnown RBP26.18■■□□□ 1.78
TMED4-203ENST00000457408 C1orf167Q5SNV9 1468 aa26.18■■□□□ 1.78
TMED4-203ENST00000457408 KCNH5Q8NCM2 988 aa26.17■■□□□ 1.78
TMED4-203ENST00000457408 KDM4FA0A1W2PPD8 638 aa26.17■■□□□ 1.78
TMED4-203ENST00000457408 GCP02774 474 aa26.17■■□□□ 1.78
TMED4-203ENST00000457408 IP6K1Q92551 441 aa26.17■■□□□ 1.78
TMED4-203ENST00000457408 KDRP35968 1356 aa26.17■■□□□ 1.78
TMED4-203ENST00000457408 TMEM57Q8N5G2 664 aa26.16■■□□□ 1.78
TMED4-203ENST00000457408 PDE4AP27815 886 aa26.15■■□□□ 1.78
TMED4-203ENST00000457408 KIF24Q5T7B8 1368 aa26.15■■□□□ 1.78
TMED4-203ENST00000457408 MRPL50Q8N5N7 158 aaKnown RBP26.14■■□□□ 1.78
TMED4-203ENST00000457408 GAS2L2Q8NHY3 880 aa26.14■■□□□ 1.77
TMED4-203ENST00000457408 LTN1O94822 1766 aa26.13■■□□□ 1.77
TMED4-203ENST00000457408 CHL1O00533 1208 aa26.13■■□□□ 1.77
TMED4-203ENST00000457408 ZNF428Q96B54 188 aa26.13■■□□□ 1.77
TMED4-203ENST00000457408 NBPF6Q5VWK0 638 aa26.13■■□□□ 1.77
TMED4-203ENST00000457408 NBPF4Q96M43 638 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms