RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
HIPK3-203ENST00000456517 FIBPO43427 364 aa17.22■□□□□ 0.35
HIPK3-203ENST00000456517 CYP46A1Q9Y6A2 500 aa17.22■□□□□ 0.35
HIPK3-203ENST00000456517 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
HIPK3-203ENST00000456517 RAI14Q9P0K7 980 aa17.22■□□□□ 0.35
HIPK3-203ENST00000456517 H0YHG0 523 aa17.22■□□□□ 0.35
HIPK3-203ENST00000456517 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
HIPK3-203ENST00000456517 HMGB2P26583 209 aaKnown RBP17.21■□□□□ 0.35
HIPK3-203ENST00000456517 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 NEBLO76041 1014 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
HIPK3-203ENST00000456517 SERPINC1P01008 464 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 DESP17661 470 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 NOL7Q9UMY1 257 aaKnown RBP17.21■□□□□ 0.35
HIPK3-203ENST00000456517 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 CUX1P39880 1505 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 LRP2BPQ9P2M1 347 aa17.21■□□□□ 0.35
HIPK3-203ENST00000456517 CCP110O43303 1012 aa17.2■□□□□ 0.34
HIPK3-203ENST00000456517 WDHD1O75717 1129 aaPredicted RBP17.2■□□□□ 0.34
HIPK3-203ENST00000456517 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
HIPK3-203ENST00000456517 UBAC1Q9BSL1 405 aa17.2■□□□□ 0.34
HIPK3-203ENST00000456517 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
HIPK3-203ENST00000456517 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
HIPK3-203ENST00000456517 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
HIPK3-203ENST00000456517 NOB1Q9ULX3 412 aaKnown RBP17.19■□□□□ 0.34
HIPK3-203ENST00000456517 CCDC7Q96M83 1385 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
HIPK3-203ENST00000456517 ME1P48163 572 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 SEPT11Q9NVA2 429 aaKnown RBP17.19■□□□□ 0.34
HIPK3-203ENST00000456517 MBD3O95983 291 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 DACH1Q9UI36 760 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 USP5P45974 858 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
HIPK3-203ENST00000456517 CCDC97Q96F63 343 aaPredicted RBP17.18■□□□□ 0.34
HIPK3-203ENST00000456517 TRIM21P19474 475 aaKnown RBP17.18■□□□□ 0.34
HIPK3-203ENST00000456517 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
HIPK3-203ENST00000456517 AXDND1Q5T1B0 1012 aaPredicted RBP17.18■□□□□ 0.34
HIPK3-203ENST00000456517 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
HIPK3-203ENST00000456517 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
HIPK3-203ENST00000456517 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
HIPK3-203ENST00000456517 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
HIPK3-203ENST00000456517 RABEP1Q15276 862 aa17.17■□□□□ 0.34
HIPK3-203ENST00000456517 CCDC181Q5TID7 509 aa17.17■□□□□ 0.34
HIPK3-203ENST00000456517 AACSQ86V21 672 aa17.17■□□□□ 0.34
HIPK3-203ENST00000456517 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
HIPK3-203ENST00000456517 PIBF1Q8WXW3 757 aa17.17■□□□□ 0.34
HIPK3-203ENST00000456517 TSPY26PQ9H489 355 aa17.17■□□□□ 0.34
HIPK3-203ENST00000456517 STARD3NLO95772 234 aa17.16■□□□□ 0.34
HIPK3-203ENST00000456517 CDKL5O76039 1030 aa17.16■□□□□ 0.34
HIPK3-203ENST00000456517 TXLNBQ8N3L3 684 aa17.16■□□□□ 0.34
HIPK3-203ENST00000456517 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
HIPK3-203ENST00000456517 GOLGA6L10A6NI86 522 aa17.16■□□□□ 0.34
HIPK3-203ENST00000456517 PAXIP1Q6ZW49 1069 aaPredicted RBP17.16■□□□□ 0.34
HIPK3-203ENST00000456517 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
HIPK3-203ENST00000456517 ABCF2Q9UG63 623 aa17.16■□□□□ 0.34
HIPK3-203ENST00000456517 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
HIPK3-203ENST00000456517 ZPR1O75312 459 aa17.15■□□□□ 0.34
HIPK3-203ENST00000456517 FGD6Q6ZV73 1430 aa17.15■□□□□ 0.34
HIPK3-203ENST00000456517 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
HIPK3-203ENST00000456517 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
HIPK3-203ENST00000456517 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
HIPK3-203ENST00000456517 AEBP1Q8IUX7 1158 aa17.14■□□□□ 0.34
HIPK3-203ENST00000456517 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.34
HIPK3-203ENST00000456517 CTNNA3Q9UI47 895 aa17.14■□□□□ 0.34
HIPK3-203ENST00000456517 IDH1O75874 414 aaKnown RBP17.14■□□□□ 0.33
HIPK3-203ENST00000456517 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
HIPK3-203ENST00000456517 ENOX2Q16206 610 aaKnown RBP17.14■□□□□ 0.33
HIPK3-203ENST00000456517 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
HIPK3-203ENST00000456517 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
HIPK3-203ENST00000456517 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
HIPK3-203ENST00000456517 SRGAP3O43295 1099 aa17.13■□□□□ 0.33
HIPK3-203ENST00000456517 SCLT1Q96NL6 688 aa17.13■□□□□ 0.33
HIPK3-203ENST00000456517 TSPYL1Q9H0U9 437 aa17.13■□□□□ 0.33
HIPK3-203ENST00000456517 PPM1FP49593 454 aaPredicted RBP17.13■□□□□ 0.33
HIPK3-203ENST00000456517 SPC24Q8NBT2 197 aa17.13■□□□□ 0.33
HIPK3-203ENST00000456517 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
HIPK3-203ENST00000456517 CRACR2BQ8N4Y2 399 aaPredicted RBP17.13■□□□□ 0.33
HIPK3-203ENST00000456517 TTLL12Q14166 644 aaPredicted RBP17.12■□□□□ 0.33
HIPK3-203ENST00000456517 TNMDQ9H2S6 317 aa17.12■□□□□ 0.33
HIPK3-203ENST00000456517 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
HIPK3-203ENST00000456517 TNIP1Q15025 636 aa17.12■□□□□ 0.33
HIPK3-203ENST00000456517 ZNF287Q9HBT7 754 aa17.12■□□□□ 0.33
HIPK3-203ENST00000456517 SSR1P43307 286 aaKnown RBP17.12■□□□□ 0.33
HIPK3-203ENST00000456517 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
HIPK3-203ENST00000456517 MRE11P49959 708 aa17.12■□□□□ 0.33
HIPK3-203ENST00000456517 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
HIPK3-203ENST00000456517 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■■□ 24.5
HIPK3-203ENST00000456517 AIDAQ96BJ3 306 aa17.11■□□□□ 0.33
HIPK3-203ENST00000456517 CWC15Q9P013 229 aaKnown RBP17.11■□□□□ 0.33
HIPK3-203ENST00000456517 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
HIPK3-203ENST00000456517 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
HIPK3-203ENST00000456517 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
HIPK3-203ENST00000456517 KRT85P78386 507 aa17.11■□□□□ 0.33
HIPK3-203ENST00000456517 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms