RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 ZNF335Q9H4Z2 1342 aaPredicted RBP9.83□□□□□ -0.84
ERCC3-204ENST00000456257 GCP02774 474 aa9.83□□□□□ -0.84
ERCC3-204ENST00000456257 HOXC9P31274 260 aa9.83□□□□□ -0.84
ERCC3-204ENST00000456257 FKBP8Q14318 412 aa9.83□□□□□ -0.84
ERCC3-204ENST00000456257 NFE2L2Q16236 605 aa9.83□□□□□ -0.84
ERCC3-204ENST00000456257 PHACTR3Q96KR7 559 aa9.83□□□□□ -0.84
ERCC3-204ENST00000456257 SLAIN2Q9P270 581 aa9.83□□□□□ -0.84
ERCC3-204ENST00000456257 SALL2Q9Y467 1007 aaPredicted RBP9.83□□□□□ -0.84
ERCC3-204ENST00000456257 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
ERCC3-204ENST00000456257 NPHP3Q7Z494 1330 aa9.82□□□□□ -0.84
ERCC3-204ENST00000456257 IGSF1Q8N6C5 1336 aa9.82□□□□□ -0.84
ERCC3-204ENST00000456257 NFAT5O94916 1531 aa9.82□□□□□ -0.84
ERCC3-204ENST00000456257 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
ERCC3-204ENST00000456257 PPM1GO15355 546 aaPredicted RBP9.82□□□□□ -0.84
ERCC3-204ENST00000456257 NEFLP07196 543 aa9.82□□□□□ -0.84
ERCC3-204ENST00000456257 CT47B1P0C2W7 299 aaPredicted RBP9.82□□□□□ -0.84
ERCC3-204ENST00000456257 PRKAR2BP31323 418 aa9.82□□□□□ -0.84
ERCC3-204ENST00000456257 ARHGEF10O15013 1369 aa9.82□□□□□ -0.84
ERCC3-204ENST00000456257 PHRF1Q9P1Y6 1649 aaKnown RBP9.82□□□□□ -0.84
ERCC3-204ENST00000456257 SLIT3O75094 1523 aa9.82□□□□□ -0.84
ERCC3-204ENST00000456257 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
ERCC3-204ENST00000456257 DCAF8L1A6NGE4 600 aa9.81□□□□□ -0.84
ERCC3-204ENST00000456257 ZNF853P0CG23 659 aa9.81□□□□□ -0.84
ERCC3-204ENST00000456257 BRINP3Q76B58 766 aa9.81□□□□□ -0.84
ERCC3-204ENST00000456257 EYA1Q99502 592 aa9.81□□□□□ -0.84
ERCC3-204ENST00000456257 PEAK1Q9H792 1746 aa9.81□□□□□ -0.84
ERCC3-204ENST00000456257 TRPM3Q9HCF6 1732 aaPredicted RBP9.81□□□□□ -0.84
ERCC3-204ENST00000456257 NCAPD2Q15021 1401 aa9.81□□□□□ -0.84
ERCC3-204ENST00000456257 SPATA31A3Q5VYP0 1347 aa9.81□□□□□ -0.84
ERCC3-204ENST00000456257 XIRP1Q702N8 1843 aaKnown RBP9.8□□□□□ -0.84
ERCC3-204ENST00000456257 RGPD1P0DJD0 1748 aa9.8□□□□□ -0.84
ERCC3-204ENST00000456257 HTATSF1O43719 755 aaKnown RBP9.8□□□□□ -0.84
ERCC3-204ENST00000456257 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
ERCC3-204ENST00000456257 AMPHP49418 695 aa9.8□□□□□ -0.84
ERCC3-204ENST00000456257 RIPK4P57078 832 aa9.8□□□□□ -0.84
ERCC3-204ENST00000456257 PXDNQ92626 1479 aa9.79□□□□□ -0.84
ERCC3-204ENST00000456257 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
ERCC3-204ENST00000456257 BRPF1P55201 1214 aaPredicted RBP9.79□□□□□ -0.84
ERCC3-204ENST00000456257 RRP1P56182 461 aaKnown RBP9.79□□□□□ -0.84
ERCC3-204ENST00000456257 MYH16Q9H6N6 1097 aa9.79□□□□□ -0.84
ERCC3-204ENST00000456257 MAPK8IP3Q9UPT6 1336 aa9.79□□□□□ -0.84
ERCC3-204ENST00000456257 CALD1Q05682 793 aaKnown RBP9.78□□□□□ -0.84
ERCC3-204ENST00000456257 SULT6B1Q6IMI4 303 aa9.78□□□□□ -0.84
ERCC3-204ENST00000456257 PPP4R2Q9NY27 417 aa9.78□□□□□ -0.84
ERCC3-204ENST00000456257 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
ERCC3-204ENST00000456257 ALS2Q96Q42 1657 aa9.77□□□□□ -0.84
ERCC3-204ENST00000456257 CPDO75976 1380 aa9.77□□□□□ -0.84
ERCC3-204ENST00000456257 NEFMP07197 916 aa9.77□□□□□ -0.85
ERCC3-204ENST00000456257 HMOX1P09601 288 aa9.77□□□□□ -0.85
ERCC3-204ENST00000456257 LMOD3Q0VAK6 560 aa9.77□□□□□ -0.85
ERCC3-204ENST00000456257 NUTM2GQ5VZR2 741 aa9.77□□□□□ -0.85
ERCC3-204ENST00000456257 AEBP1Q8IUX7 1158 aa9.77□□□□□ -0.85
ERCC3-204ENST00000456257 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
ERCC3-204ENST00000456257 PLEKHG2Q9H7P9 1386 aa9.76□□□□□ -0.85
ERCC3-204ENST00000456257 RARSP54136 660 aaKnown RBP9.76□□□□□ -0.85
ERCC3-204ENST00000456257 NEUROD2Q15784 382 aa9.76□□□□□ -0.85
ERCC3-204ENST00000456257 IFT57Q9NWB7 429 aa9.76□□□□□ -0.85
ERCC3-204ENST00000456257 LTBP4Q8N2S1 1624 aa9.75□□□□□ -0.85
ERCC3-204ENST00000456257 TNS3Q68CZ2 1445 aa9.75□□□□□ -0.85
ERCC3-204ENST00000456257 CHL1O00533 1208 aa9.75□□□□□ -0.85
ERCC3-204ENST00000456257 XPCQ01831 940 aaPredicted RBP9.75□□□□□ -0.85
ERCC3-204ENST00000456257 PDE3AQ14432 1141 aa9.75□□□□□ -0.85
ERCC3-204ENST00000456257 CFAP44Q96MT7 982 aa9.75□□□□□ -0.85
ERCC3-204ENST00000456257 BABAM1Q9NWV8 329 aa9.75□□□□□ -0.85
ERCC3-204ENST00000456257 ABCC6O95255 1503 aa9.75□□□□□ -0.85
ERCC3-204ENST00000456257 GNAI1P63096 354 aa9.74□□□□□ -0.85
ERCC3-204ENST00000456257 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
ERCC3-204ENST00000456257 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
ERCC3-204ENST00000456257 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
ERCC3-204ENST00000456257 AXIN2Q9Y2T1 843 aa9.74□□□□□ -0.85
ERCC3-204ENST00000456257 MED1Q15648 1581 aaPredicted RBP9.74□□□□□ -0.85
ERCC3-204ENST00000456257 MTHFSDQ2M296 383 aaKnown RBP9.73□□□□□ -0.85
ERCC3-204ENST00000456257 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.73□□□□□ -0.85
ERCC3-204ENST00000456257 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
ERCC3-204ENST00000456257 FANCIQ9NVI1 1328 aa9.73□□□□□ -0.85
ERCC3-204ENST00000456257 CRB1P82279 1406 aa9.73□□□□□ -0.85
ERCC3-204ENST00000456257 VAMP4O75379 141 aa9.72□□□□□ -0.85
ERCC3-204ENST00000456257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.854e-9■■■■□ 21
ERCC3-204ENST00000456257 SOX12O15370 315 aa9.71□□□□□ -0.86
ERCC3-204ENST00000456257 BCAR3O75815 825 aa9.71□□□□□ -0.86
ERCC3-204ENST00000456257 EXOSC9Q06265 439 aaKnown RBP9.71□□□□□ -0.86
ERCC3-204ENST00000456257 AAMPQ13685 434 aa9.71□□□□□ -0.86
ERCC3-204ENST00000456257 ALDH1L2Q3SY69 923 aa9.71□□□□□ -0.86
ERCC3-204ENST00000456257 COL18A1P39060 1754 aa9.7□□□□□ -0.86
ERCC3-204ENST00000456257 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
ERCC3-204ENST00000456257 ANKRD24Q8TF21 1146 aa9.7□□□□□ -0.86
ERCC3-204ENST00000456257 ERBB3P21860 1342 aa9.7□□□□□ -0.86
ERCC3-204ENST00000456257 CEMIPQ8WUJ3 1361 aa9.7□□□□□ -0.86
ERCC3-204ENST00000456257 KIAA0232Q92628 1395 aa9.7□□□□□ -0.86
ERCC3-204ENST00000456257 GNAT3A8MTJ3 354 aa9.69□□□□□ -0.86
ERCC3-204ENST00000456257 SOS1Q07889 1333 aaPredicted RBP9.69□□□□□ -0.86
ERCC3-204ENST00000456257 IL17REQ8NFR9 667 aa9.69□□□□□ -0.86
ERCC3-204ENST00000456257 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
ERCC3-204ENST00000456257 MBIPQ9NS73 344 aa9.69□□□□□ -0.86
ERCC3-204ENST00000456257 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
ERCC3-204ENST00000456257 LMO7Q8WWI1 1683 aa9.68□□□□□ -0.86
ERCC3-204ENST00000456257 CAMTA1Q9Y6Y1 1673 aa9.68□□□□□ -0.86
ERCC3-204ENST00000456257 FAM83GA6ND36 823 aa9.68□□□□□ -0.86
ERCC3-204ENST00000456257 PLIN1O60240 522 aa9.68□□□□□ -0.86
ERCC3-204ENST00000456257 IRX6P78412 446 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms