RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 NFKBIBQ15653 356 aa12.94□□□□□ -0.34
CHCHD4P3-201ENST00000455954 UNC5CLQ8IV45 518 aa12.94□□□□□ -0.34
CHCHD4P3-201ENST00000455954 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
CHCHD4P3-201ENST00000455954 CDCA7LQ96GN5 454 aa12.94□□□□□ -0.34
CHCHD4P3-201ENST00000455954 ATRNO75882 1429 aa12.94□□□□□ -0.34
CHCHD4P3-201ENST00000455954 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
CHCHD4P3-201ENST00000455954 SLIT2O94813 1529 aa12.93□□□□□ -0.34
CHCHD4P3-201ENST00000455954 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
CHCHD4P3-201ENST00000455954 FAM83GA6ND36 823 aa12.92□□□□□ -0.34
CHCHD4P3-201ENST00000455954 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
CHCHD4P3-201ENST00000455954 AAMPQ13685 434 aa12.92□□□□□ -0.34
CHCHD4P3-201ENST00000455954 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
CHCHD4P3-201ENST00000455954 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
CHCHD4P3-201ENST00000455954 ABTB2Q8N961 1025 aa12.92□□□□□ -0.34
CHCHD4P3-201ENST00000455954 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
CHCHD4P3-201ENST00000455954 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
CHCHD4P3-201ENST00000455954 C8orf34Q49A92 452 aa12.91□□□□□ -0.34
CHCHD4P3-201ENST00000455954 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
CHCHD4P3-201ENST00000455954 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
CHCHD4P3-201ENST00000455954 RGS12O14924 1447 aa12.9□□□□□ -0.34
CHCHD4P3-201ENST00000455954 WDR43Q15061 677 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHCHD4P3-201ENST00000455954 NUTM2GQ5VZR2 741 aa12.9□□□□□ -0.34
CHCHD4P3-201ENST00000455954 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
CHCHD4P3-201ENST00000455954 PANK3Q9H999 370 aa12.9□□□□□ -0.34
CHCHD4P3-201ENST00000455954 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.9□□□□□ -0.34
CHCHD4P3-201ENST00000455954 USP6P35125 1406 aa12.89□□□□□ -0.35
CHCHD4P3-201ENST00000455954 VPS72Q15906 364 aa12.89□□□□□ -0.35
CHCHD4P3-201ENST00000455954 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 PPP2R1AP30153 589 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 ANO8Q9HCE9 1232 aaPredicted RBP12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 BTG4Q9NY30 223 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
CHCHD4P3-201ENST00000455954 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 PLCH1Q4KWH8 1693 aa12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 PLIN1O60240 522 aa12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 FAM43AQ8N2R8 423 aa12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 CCDC9Q9Y3X0 531 aaKnown RBP12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 SSH2Q76I76 1423 aa12.87□□□□□ -0.35
CHCHD4P3-201ENST00000455954 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 NLRP6P59044 892 aa12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 UPF1Q92900 1129 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 CPSF1Q10570 1443 aaKnown RBP12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 USP19O94966 1318 aa12.86□□□□□ -0.35
CHCHD4P3-201ENST00000455954 PHRF1Q9P1Y6 1649 aaKnown RBP12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 GCP02774 474 aa12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 GLI3P10071 1580 aa12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
CHCHD4P3-201ENST00000455954 E9PSI1 815 aa12.84□□□□□ -0.35
CHCHD4P3-201ENST00000455954 BECN1Q14457 450 aa12.84□□□□□ -0.35
CHCHD4P3-201ENST00000455954 CHRNA2Q15822 529 aa12.84□□□□□ -0.35
CHCHD4P3-201ENST00000455954 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
CHCHD4P3-201ENST00000455954 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
CHCHD4P3-201ENST00000455954 CPDO75976 1380 aa12.83□□□□□ -0.36
CHCHD4P3-201ENST00000455954 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
CHCHD4P3-201ENST00000455954 AKAP12Q02952 1782 aa12.83□□□□□ -0.36
CHCHD4P3-201ENST00000455954 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
CHCHD4P3-201ENST00000455954 NRKQ7Z2Y5 1582 aa12.82□□□□□ -0.36
CHCHD4P3-201ENST00000455954 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
CHCHD4P3-201ENST00000455954 HDGFL2Q7Z4V5 671 aaPredicted RBP12.82□□□□□ -0.36
CHCHD4P3-201ENST00000455954 RSPH6AQ9H0K4 717 aa12.82□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SLC12A5Q9H2X9 1139 aa12.82□□□□□ -0.36
CHCHD4P3-201ENST00000455954 TERF2IPQ9NYB0 399 aa12.82□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SENP3-EIF4A1A0A087X0R7 540 aa12.81□□□□□ -0.36
CHCHD4P3-201ENST00000455954 EVA1CP58658 441 aa12.81□□□□□ -0.36
CHCHD4P3-201ENST00000455954 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SEPT12Q8IYM1 358 aa12.81□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SPATA31A5Q5VU36 1347 aa12.81□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SPATA31A7Q8IWB4 1347 aa12.81□□□□□ -0.36
CHCHD4P3-201ENST00000455954 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
CHCHD4P3-201ENST00000455954 CD163L1Q9NR16 1453 aa12.8□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SLIT3O75094 1523 aa12.8□□□□□ -0.36
CHCHD4P3-201ENST00000455954 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
CHCHD4P3-201ENST00000455954 STRN4Q9NRL3 753 aa12.8□□□□□ -0.36
CHCHD4P3-201ENST00000455954 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
CHCHD4P3-201ENST00000455954 FAM98CQ17RN3 349 aaKnown RBP12.79□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.36
CHCHD4P3-201ENST00000455954 MON2Q7Z3U7 1717 aa12.79□□□□□ -0.36
CHCHD4P3-201ENST00000455954 CAMTA1Q9Y6Y1 1673 aa12.78□□□□□ -0.36
CHCHD4P3-201ENST00000455954 A0A0G2JS52 829 aa12.78□□□□□ -0.36
CHCHD4P3-201ENST00000455954 SPATA31A1Q5TZJ5 1347 aa12.78□□□□□ -0.36
CHCHD4P3-201ENST00000455954 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
CHCHD4P3-201ENST00000455954 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
CHCHD4P3-201ENST00000455954 KRT27Q7Z3Y8 459 aa12.77□□□□□ -0.37
CHCHD4P3-201ENST00000455954 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
CHCHD4P3-201ENST00000455954 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
CHCHD4P3-201ENST00000455954 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
CHCHD4P3-201ENST00000455954 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms