RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 KCPQ6ZWJ8 1503 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 TTC21BQ7Z4L5 1316 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 BCL9O00512 1426 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 BTAF1O14981 1849 aa6.98□□□□□ -1.29
RIF1-207ENST00000454583 SPATA31A3Q5VYP0 1347 aa6.98□□□□□ -1.29
RIF1-207ENST00000454583 RNF39Q9H2S5 420 aa6.98□□□□□ -1.29
RIF1-207ENST00000454583 CCDC61Q9Y6R9 512 aa6.98□□□□□ -1.29
RIF1-207ENST00000454583 MSH6P52701 1360 aa6.98□□□□□ -1.29
RIF1-207ENST00000454583 PNISRQ8TF01 805 aaKnown RBP6.97□□□□□ -1.29
RIF1-207ENST00000454583 NRXN2Q9P2S2 1712 aa6.97□□□□□ -1.29
RIF1-207ENST00000454583 TRMT2AQ8IZ69 625 aaKnown RBP6.97□□□□□ -1.29
RIF1-207ENST00000454583 ARFGEF2Q9Y6D5 1785 aa6.97□□□□□ -1.29
RIF1-207ENST00000454583 CABP1Q9NZU7 370 aa6.97□□□□□ -1.29
RIF1-207ENST00000454583 MINK1Q8N4C8 1332 aaPredicted RBP6.96□□□□□ -1.29
RIF1-207ENST00000454583 SCN7AQ01118 1682 aa6.96□□□□□ -1.3
RIF1-207ENST00000454583 UBR3Q6ZT12 1888 aa6.96□□□□□ -1.3
RIF1-207ENST00000454583 PPP2R1AP30153 589 aa6.95□□□□□ -1.3
RIF1-207ENST00000454583 POTEDQ86YR6 584 aa6.95□□□□□ -1.3
RIF1-207ENST00000454583 ORAI2Q96SN7 254 aa6.95□□□□□ -1.3
RIF1-207ENST00000454583 MEGF6O75095 1541 aa6.95□□□□□ -1.3
RIF1-207ENST00000454583 ESF1Q9H501 851 aaKnown RBP6.95□□□□□ -1.3
RIF1-207ENST00000454583 ATRNO75882 1429 aa6.95□□□□□ -1.3
RIF1-207ENST00000454583 MYBBP1AQ9BQG0 1328 aaKnown RBP6.95□□□□□ -1.3
RIF1-207ENST00000454583 ARHGEF10O15013 1369 aa6.95□□□□□ -1.3
RIF1-207ENST00000454583 ZRANB1Q9UGI0 708 aa6.95□□□□□ -1.3
RIF1-207ENST00000454583 KIF13BQ9NQT8 1826 aa6.94□□□□□ -1.3
RIF1-207ENST00000454583 C1QBPQ07021 282 aaKnown RBP6.94□□□□□ -1.3
RIF1-207ENST00000454583 IL13P35225 146 aa6.94□□□□□ -1.3
RIF1-207ENST00000454583 POLKQ9UBT6 870 aa6.94□□□□□ -1.3
RIF1-207ENST00000454583 HEG1Q9ULI3 1381 aa6.94□□□□□ -1.3
RIF1-207ENST00000454583 CRB1P82279 1406 aa6.94□□□□□ -1.3
RIF1-207ENST00000454583 TNS2Q63HR2 1409 aa6.94□□□□□ -1.3
RIF1-207ENST00000454583 ZNF692Q9BU19 519 aaPredicted RBP6.93□□□□□ -1.3
RIF1-207ENST00000454583 IGSF1Q8N6C5 1336 aa6.93□□□□□ -1.3
RIF1-207ENST00000454583 RALBP1Q15311 655 aa6.93□□□□□ -1.3
RIF1-207ENST00000454583 DLEC1Q9Y238 1755 aa6.93□□□□□ -1.3
RIF1-207ENST00000454583 CHGAP10645 457 aaKnown RBP6.92□□□□□ -1.3
RIF1-207ENST00000454583 DDX60Q8IY21 1712 aaKnown RBP6.92□□□□□ -1.3
RIF1-207ENST00000454583 RNF123Q5XPI4 1314 aa6.92□□□□□ -1.3
RIF1-207ENST00000454583 STK26Q9P289 416 aa6.92□□□□□ -1.3
RIF1-207ENST00000454583 CEMIPQ8WUJ3 1361 aa6.92□□□□□ -1.3
RIF1-207ENST00000454583 CDCA8Q53HL2 280 aa6.92□□□□□ -1.3
RIF1-207ENST00000454583 CGNL1Q0VF96 1302 aa6.92□□□□□ -1.3
RIF1-207ENST00000454583 ARHGEF25Q86VW2 580 aa6.91□□□□□ -1.3
RIF1-207ENST00000454583 NME9Q86XW9 330 aa6.91□□□□□ -1.3
RIF1-207ENST00000454583 MYH14Q7Z406 1995 aaKnown RBP6.91□□□□□ -1.3
RIF1-207ENST00000454583 KDM6AO15550 1401 aaPredicted RBP6.91□□□□□ -1.3
RIF1-207ENST00000454583 SLAIN2Q9P270 581 aa6.91□□□□□ -1.3
RIF1-207ENST00000454583 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
RIF1-207ENST00000454583 PHF8Q9UPP1 1060 aa6.9□□□□□ -1.3
RIF1-207ENST00000454583 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.31
RIF1-207ENST00000454583 BRCA1P38398 1863 aaKnown RBP6.9□□□□□ -1.31
RIF1-207ENST00000454583 LTBP1Q14766 1721 aa6.89□□□□□ -1.31
RIF1-207ENST00000454583 AXIN2Q9Y2T1 843 aa6.89□□□□□ -1.31
RIF1-207ENST00000454583 FLT4P35916 1363 aa6.89□□□□□ -1.31
RIF1-207ENST00000454583 CADPS2Q86UW7 1296 aa6.89□□□□□ -1.31
RIF1-207ENST00000454583 RSPH6AQ9H0K4 717 aa6.89□□□□□ -1.31
RIF1-207ENST00000454583 RGS12O14924 1447 aa6.89□□□□□ -1.31
RIF1-207ENST00000454583 MAP3K19Q56UN5 1328 aa6.88□□□□□ -1.31
RIF1-207ENST00000454583 IBTKQ9P2D0 1353 aaPredicted RBP6.88□□□□□ -1.31
RIF1-207ENST00000454583 ARAP2Q8WZ64 1704 aa6.88□□□□□ -1.31
RIF1-207ENST00000454583 CERKQ8TCT0 537 aa6.88□□□□□ -1.31
RIF1-207ENST00000454583 LRRC37AA6NMS7 1700 aa6.87□□□□□ -1.31
RIF1-207ENST00000454583 NUP98P52948 1817 aa6.87□□□□□ -1.31
RIF1-207ENST00000454583 DDX17Q92841 729 aaKnown RBP6.87□□□□□ -1.31
RIF1-207ENST00000454583 STAG3Q9UJ98 1225 aa6.87□□□□□ -1.31
RIF1-207ENST00000454583 CCDC27Q2M243 656 aa6.87□□□□□ -1.31
RIF1-207ENST00000454583 AFDNP55196 1824 aaKnown RBP6.86□□□□□ -1.31
RIF1-207ENST00000454583 LRP5O75197 1615 aa6.86□□□□□ -1.31
RIF1-207ENST00000454583 ONECUT3O60422 494 aaPredicted RBP6.86□□□□□ -1.31
RIF1-207ENST00000454583 HOXC9P31274 260 aa6.86□□□□□ -1.31
RIF1-207ENST00000454583 ATF5Q9Y2D1 282 aaPredicted RBP6.86□□□□□ -1.31
RIF1-207ENST00000454583 ZNF853P0CG23 659 aa6.85□□□□□ -1.31
RIF1-207ENST00000454583 FBLN1P23142 703 aa6.85□□□□□ -1.31
RIF1-207ENST00000454583 NLRP13Q86W25 1043 aa6.85□□□□□ -1.31
RIF1-207ENST00000454583 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
RIF1-207ENST00000454583 TRIM35Q9UPQ4 493 aa6.85□□□□□ -1.31
RIF1-207ENST00000454583 ERBB3P21860 1342 aa6.85□□□□□ -1.31
RIF1-207ENST00000454583 NPHP3Q7Z494 1330 aa6.85□□□□□ -1.31
RIF1-207ENST00000454583 FNBP4Q8N3X1 1017 aaPredicted RBP6.84□□□□□ -1.31
RIF1-207ENST00000454583 MYH3P11055 1940 aa6.84□□□□□ -1.31
RIF1-207ENST00000454583 EIF4A2Q14240 407 aaKnown RBP6.84□□□□□ -1.31
RIF1-207ENST00000454583 IP6K1Q92551 441 aa6.84□□□□□ -1.31
RIF1-207ENST00000454583 TERF2IPQ9NYB0 399 aa6.84□□□□□ -1.31
RIF1-207ENST00000454583 POGKQ9P215 609 aa6.84□□□□□ -1.31
RIF1-207ENST00000454583 COL4A1P02462 1669 aa6.84□□□□□ -1.31
RIF1-207ENST00000454583 SAFB2Q14151 953 aaKnown RBP eCLIP6.84□□□□□ -1.312e-7■■□□□ 12.6
RIF1-207ENST00000454583 ANKRD31Q8N7Z5 1873 aa6.84□□□□□ -1.32
RIF1-207ENST00000454583 ZNF219Q9P2Y4 722 aaPredicted RBP6.83□□□□□ -1.32
RIF1-207ENST00000454583 EMILIN1Q9Y6C2 1016 aa6.83□□□□□ -1.32
RIF1-207ENST00000454583 KIAA0232Q92628 1395 aa6.83□□□□□ -1.32
RIF1-207ENST00000454583 KRT28Q7Z3Y7 464 aa6.83□□□□□ -1.32
RIF1-207ENST00000454583 PROM2Q8N271 834 aa6.83□□□□□ -1.32
RIF1-207ENST00000454583 RGS17Q9UGC6 210 aaPredicted RBP6.83□□□□□ -1.32
RIF1-207ENST00000454583 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
RIF1-207ENST00000454583 JCADQ9P266 1359 aa6.82□□□□□ -1.32
RIF1-207ENST00000454583 NKX1-1Q15270 411 aaPredicted RBP6.82□□□□□ -1.32
RIF1-207ENST00000454583 PMFBP1Q8TBY8 1022 aa6.82□□□□□ -1.32
RIF1-207ENST00000454583 ZBED9Q6R2W3 1325 aa6.82□□□□□ -1.32
RIF1-207ENST00000454583 SRPK2P78362 688 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms