RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
LINC00343-203ENST00000454555 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
LINC00343-203ENST00000454555 HSPA1LP34931 641 aa17.22■□□□□ 0.35
LINC00343-203ENST00000454555 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
LINC00343-203ENST00000454555 KDM2BQ8NHM5 1336 aa17.22■□□□□ 0.35
LINC00343-203ENST00000454555 CRBNQ96SW2 442 aa17.22■□□□□ 0.35
LINC00343-203ENST00000454555 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
LINC00343-203ENST00000454555 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
LINC00343-203ENST00000454555 USP54Q70EL1 1684 aa17.21■□□□□ 0.35
LINC00343-203ENST00000454555 USP19O94966 1318 aa17.2■□□□□ 0.34
LINC00343-203ENST00000454555 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
LINC00343-203ENST00000454555 NUTM2GQ5VZR2 741 aa17.2■□□□□ 0.34
LINC00343-203ENST00000454555 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
LINC00343-203ENST00000454555 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
LINC00343-203ENST00000454555 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
LINC00343-203ENST00000454555 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
LINC00343-203ENST00000454555 MED1Q15648 1581 aaPredicted RBP17.18■□□□□ 0.34
LINC00343-203ENST00000454555 JCADQ9P266 1359 aa17.18■□□□□ 0.34
LINC00343-203ENST00000454555 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
LINC00343-203ENST00000454555 KCNH5Q8NCM2 988 aa17.17■□□□□ 0.34
LINC00343-203ENST00000454555 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
LINC00343-203ENST00000454555 SLIT3O75094 1523 aa17.17■□□□□ 0.34
LINC00343-203ENST00000454555 COL22A1Q8NFW1 1626 aaPredicted RBP17.17■□□□□ 0.34
LINC00343-203ENST00000454555 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
LINC00343-203ENST00000454555 MARF1Q9Y4F3 1742 aaKnown RBP17.16■□□□□ 0.34
LINC00343-203ENST00000454555 GCP02774 474 aa17.15■□□□□ 0.34
LINC00343-203ENST00000454555 TRMT2AQ8IZ69 625 aaKnown RBP17.15■□□□□ 0.34
LINC00343-203ENST00000454555 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
LINC00343-203ENST00000454555 PLIN1O60240 522 aa17.15■□□□□ 0.34
LINC00343-203ENST00000454555 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
LINC00343-203ENST00000454555 CABLES1Q8TDN4 633 aa17.14■□□□□ 0.33
LINC00343-203ENST00000454555 SHPRHQ149N8 1683 aa17.14■□□□□ 0.33
LINC00343-203ENST00000454555 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
LINC00343-203ENST00000454555 CRYBG1Q9Y4K1 1723 aa17.13■□□□□ 0.33
LINC00343-203ENST00000454555 NEFMP07197 916 aa17.12■□□□□ 0.33
LINC00343-203ENST00000454555 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
LINC00343-203ENST00000454555 E9PSI1 815 aa17.11■□□□□ 0.33
LINC00343-203ENST00000454555 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
LINC00343-203ENST00000454555 NFAT5O94916 1531 aa17.11■□□□□ 0.33
LINC00343-203ENST00000454555 PHRF1Q9P1Y6 1649 aaKnown RBP17.11■□□□□ 0.33
LINC00343-203ENST00000454555 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
LINC00343-203ENST00000454555 AAMPQ13685 434 aa17.1■□□□□ 0.33
LINC00343-203ENST00000454555 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
LINC00343-203ENST00000454555 SOX12O15370 315 aa17.1■□□□□ 0.33
LINC00343-203ENST00000454555 FBLN1P23142 703 aa17.1■□□□□ 0.33
LINC00343-203ENST00000454555 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
LINC00343-203ENST00000454555 CPDO75976 1380 aa17.09■□□□□ 0.33
LINC00343-203ENST00000454555 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
LINC00343-203ENST00000454555 POLKQ9UBT6 870 aa17.09■□□□□ 0.33
LINC00343-203ENST00000454555 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.33
LINC00343-203ENST00000454555 ABCA3Q99758 1704 aa17.08■□□□□ 0.32
LINC00343-203ENST00000454555 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
LINC00343-203ENST00000454555 KIF24Q5T7B8 1368 aa17.07■□□□□ 0.32
LINC00343-203ENST00000454555 ZC3H6P61129 1189 aaKnown RBP17.07■□□□□ 0.32
LINC00343-203ENST00000454555 RRS1Q15050 365 aaKnown RBP17.07■□□□□ 0.32
LINC00343-203ENST00000454555 MTHFSP49914 203 aa17.06■□□□□ 0.32
LINC00343-203ENST00000454555 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
LINC00343-203ENST00000454555 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
LINC00343-203ENST00000454555 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
LINC00343-203ENST00000454555 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
LINC00343-203ENST00000454555 NUTM2BA6NNL0 878 aaPredicted RBP17.05■□□□□ 0.32
LINC00343-203ENST00000454555 NUTM2EB1AL46 878 aaPredicted RBP17.05■□□□□ 0.32
LINC00343-203ENST00000454555 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
LINC00343-203ENST00000454555 NUTM2AQ8IVF1 878 aaPredicted RBP17.05■□□□□ 0.32
LINC00343-203ENST00000454555 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
LINC00343-203ENST00000454555 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
LINC00343-203ENST00000454555 AMPHP49418 695 aa17.03■□□□□ 0.32
LINC00343-203ENST00000454555 IP6K1Q92551 441 aa17.03■□□□□ 0.32
LINC00343-203ENST00000454555 PRDM11Q9NQV5 511 aa17.03■□□□□ 0.32
LINC00343-203ENST00000454555 ABCC6O95255 1503 aa17.03■□□□□ 0.32
LINC00343-203ENST00000454555 FLT4P35916 1363 aa17.02■□□□□ 0.32
LINC00343-203ENST00000454555 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
LINC00343-203ENST00000454555 FAM83GA6ND36 823 aa17.02■□□□□ 0.32
LINC00343-203ENST00000454555 HOXC9P31274 260 aa17.02■□□□□ 0.32
LINC00343-203ENST00000454555 LAS1LQ9Y4W2 734 aaKnown RBP17.02■□□□□ 0.32
LINC00343-203ENST00000454555 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.32
LINC00343-203ENST00000454555 LRP6O75581 1613 aa17.02■□□□□ 0.31
LINC00343-203ENST00000454555 CDK12Q9NYV4 1490 aaPredicted RBP17.01■□□□□ 0.31
LINC00343-203ENST00000454555 ADAMTS2O95450 1211 aa17.01■□□□□ 0.31
LINC00343-203ENST00000454555 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
LINC00343-203ENST00000454555 CHRNA2Q15822 529 aa17■□□□□ 0.31
LINC00343-203ENST00000454555 LTN1O94822 1766 aa17■□□□□ 0.31
LINC00343-203ENST00000454555 PEAK1Q9H792 1746 aa17■□□□□ 0.31
LINC00343-203ENST00000454555 HSP90AB2PQ58FF8 381 aa17■□□□□ 0.31
LINC00343-203ENST00000454555 CFAP53Q96M91 514 aa17■□□□□ 0.31
LINC00343-203ENST00000454555 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
LINC00343-203ENST00000454555 COL18A1P39060 1754 aa16.99■□□□□ 0.31
LINC00343-203ENST00000454555 APAF1O14727 1248 aa16.99■□□□□ 0.31
LINC00343-203ENST00000454555 ILDR1Q86SU0 546 aaPredicted RBP16.98■□□□□ 0.31
LINC00343-203ENST00000454555 COL14A1Q05707 1796 aaKnown RBP16.98■□□□□ 0.31
LINC00343-203ENST00000454555 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
LINC00343-203ENST00000454555 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
LINC00343-203ENST00000454555 CAMTA1Q9Y6Y1 1673 aa16.96■□□□□ 0.31
LINC00343-203ENST00000454555 GSE1Q14687 1217 aa16.96■□□□□ 0.31
LINC00343-203ENST00000454555 NFKBIBQ15653 356 aa16.96■□□□□ 0.31
LINC00343-203ENST00000454555 SLIT2O94813 1529 aa16.95■□□□□ 0.3
LINC00343-203ENST00000454555 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
LINC00343-203ENST00000454555 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
LINC00343-203ENST00000454555 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
LINC00343-203ENST00000454555 BTG4Q9NY30 223 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms