RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PSME1Q06323 249 aa14.96□□□□□ -0.01
SMPD4-213ENST00000454468 CHD1LQ86WJ1 897 aa14.96□□□□□ -0.01
SMPD4-213ENST00000454468 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.02
SMPD4-213ENST00000454468 NINLQ9Y2I6 1382 aa14.95□□□□□ -0.02
SMPD4-213ENST00000454468 API5Q9BZZ5 524 aaKnown RBP14.95□□□□□ -0.02
SMPD4-213ENST00000454468 LMTK2Q8IWU2 1503 aa14.95□□□□□ -0.02
SMPD4-213ENST00000454468 NOL8Q76FK4 1167 aaKnown RBP14.95□□□□□ -0.02
SMPD4-213ENST00000454468 PKNOX2Q96KN3 472 aa14.95□□□□□ -0.02
SMPD4-213ENST00000454468 GSE1Q14687 1217 aa14.95□□□□□ -0.02
SMPD4-213ENST00000454468 CFAP74Q9C0B2 1584 aa14.94□□□□□ -0.02
SMPD4-213ENST00000454468 CT47B1P0C2W7 299 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-213ENST00000454468 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
SMPD4-213ENST00000454468 THEMISQ8N1K5 641 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-213ENST00000454468 CAMSAP1Q5T5Y3 1602 aa14.94□□□□□ -0.02
SMPD4-213ENST00000454468 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
SMPD4-213ENST00000454468 NEXMIFQ5QGS0 1516 aa14.94□□□□□ -0.02
SMPD4-213ENST00000454468 NRXN1Q9ULB1 1477 aa14.93□□□□□ -0.02
SMPD4-213ENST00000454468 IFT57Q9NWB7 429 aa14.93□□□□□ -0.02
SMPD4-213ENST00000454468 MYOM1P52179 1685 aa14.93□□□□□ -0.02
SMPD4-213ENST00000454468 ZBTB40Q9NUA8 1239 aa14.93□□□□□ -0.02
SMPD4-213ENST00000454468 PHF23Q9BUL5 403 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-213ENST00000454468 PPP6R1Q9UPN7 881 aa14.93□□□□□ -0.02
SMPD4-213ENST00000454468 C16orf71Q8IYS4 520 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-213ENST00000454468 MRPL50Q8N5N7 158 aaKnown RBP14.92□□□□□ -0.02
SMPD4-213ENST00000454468 KCNA6P17658 529 aa14.92□□□□□ -0.02
SMPD4-213ENST00000454468 TBC1D2Q9BYX2 928 aa14.92□□□□□ -0.02
SMPD4-213ENST00000454468 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
SMPD4-213ENST00000454468 ROBO2Q9HCK4 1378 aa14.91□□□□□ -0.02
SMPD4-213ENST00000454468 NCLP19338 710 aaKnown RBP14.91□□□□□ -0.02
SMPD4-213ENST00000454468 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
SMPD4-213ENST00000454468 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
SMPD4-213ENST00000454468 USP35Q9P2H5 1018 aa14.91□□□□□ -0.02
SMPD4-213ENST00000454468 ARHGAP31Q2M1Z3 1444 aa14.91□□□□□ -0.02
SMPD4-213ENST00000454468 TRIM6-TRIM34B2RNG4 842 aa14.9□□□□□ -0.02
SMPD4-213ENST00000454468 ALDH1L2Q3SY69 923 aa14.9□□□□□ -0.02
SMPD4-213ENST00000454468 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
SMPD4-213ENST00000454468 TSHZ3Q63HK5 1081 aa14.9□□□□□ -0.02
SMPD4-213ENST00000454468 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
SMPD4-213ENST00000454468 AAMPQ13685 434 aa14.9□□□□□ -0.02
SMPD4-213ENST00000454468 OS9Q13438 667 aaPredicted RBP14.89□□□□□ -0.03
SMPD4-213ENST00000454468 MTHFSDQ2M296 383 aaKnown RBP14.89□□□□□ -0.03
SMPD4-213ENST00000454468 IL16Q14005 1332 aa14.89□□□□□ -0.03
SMPD4-213ENST00000454468 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
SMPD4-213ENST00000454468 RILPL2Q969X0 211 aa14.89□□□□□ -0.03
SMPD4-213ENST00000454468 PTPRMP28827 1452 aa14.89□□□□□ -0.03
SMPD4-213ENST00000454468 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
SMPD4-213ENST00000454468 MEIS3Q99687 375 aa14.88□□□□□ -0.03
SMPD4-213ENST00000454468 EXOC6BQ9Y2D4 811 aa14.88□□□□□ -0.03
SMPD4-213ENST00000454468 SETBP1Q9Y6X0 1596 aa14.88□□□□□ -0.03
SMPD4-213ENST00000454468 ANXA1P04083 346 aa14.88□□□□□ -0.03
SMPD4-213ENST00000454468 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-213ENST00000454468 G2E3Q7L622 706 aa14.87□□□□□ -0.03
SMPD4-213ENST00000454468 TMEM2Q9UHN6 1383 aa14.87□□□□□ -0.03
SMPD4-213ENST00000454468 ZBTB7BO15156 539 aaPredicted RBP14.87□□□□□ -0.03
SMPD4-213ENST00000454468 TBC1D32Q96NH3 1257 aa14.87□□□□□ -0.03
SMPD4-213ENST00000454468 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
SMPD4-213ENST00000454468 SIGLEC1Q9BZZ2 1709 aa14.87□□□□□ -0.03
SMPD4-213ENST00000454468 PPLO60437 1756 aa14.87□□□□□ -0.03
SMPD4-213ENST00000454468 A0A0G2JS52 829 aa14.86□□□□□ -0.03
SMPD4-213ENST00000454468 EYA1Q99502 592 aa14.86□□□□□ -0.03
SMPD4-213ENST00000454468 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-213ENST00000454468 CSB-PGBD3P0DP91 1061 aa14.86□□□□□ -0.03
SMPD4-213ENST00000454468 TEFQ10587 303 aa14.86□□□□□ -0.03
SMPD4-213ENST00000454468 OTUD7AQ8TE49 926 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-213ENST00000454468 KIAA1210Q9ULL0 1709 aa14.86□□□□□ -0.03
SMPD4-213ENST00000454468 CASC1Q6TDU7 716 aa14.85□□□□□ -0.03
SMPD4-213ENST00000454468 EDC4Q6P2E9 1401 aaKnown RBP14.85□□□□□ -0.03
SMPD4-213ENST00000454468 FOXD4L6Q3SYB3 417 aaPredicted RBP14.85□□□□□ -0.03
SMPD4-213ENST00000454468 FOXD4L3Q6VB84 417 aaPredicted RBP14.85□□□□□ -0.03
SMPD4-213ENST00000454468 NUCB1Q02818 461 aa14.85□□□□□ -0.03
SMPD4-213ENST00000454468 ZC3H6P61129 1189 aaKnown RBP14.84□□□□□ -0.03
SMPD4-213ENST00000454468 SMC5Q8IY18 1101 aa14.84□□□□□ -0.03
SMPD4-213ENST00000454468 AIMP1Q12904 312 aaKnown RBP14.84□□□□□ -0.03
SMPD4-213ENST00000454468 GCC1Q96CN9 775 aa14.84□□□□□ -0.03
SMPD4-213ENST00000454468 ZFYVE9O95405 1425 aa14.83□□□□□ -0.04
SMPD4-213ENST00000454468 HMMRO75330 724 aa14.83□□□□□ -0.04
SMPD4-213ENST00000454468 MAP4K4O95819 1239 aaPredicted RBP14.83□□□□□ -0.04
SMPD4-213ENST00000454468 LRRC59Q96AG4 307 aaKnown RBP14.83□□□□□ -0.04
SMPD4-213ENST00000454468 USP19O94966 1318 aa14.83□□□□□ -0.04
SMPD4-213ENST00000454468 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.04
SMPD4-213ENST00000454468 GAS2L2Q8NHY3 880 aa14.83□□□□□ -0.04
SMPD4-213ENST00000454468 IL1RAPL2Q9NP60 686 aa14.83□□□□□ -0.04
SMPD4-213ENST00000454468 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
SMPD4-213ENST00000454468 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
SMPD4-213ENST00000454468 CCDC9Q9Y3X0 531 aaKnown RBP14.82□□□□□ -0.04
SMPD4-213ENST00000454468 TBC1D9Q6ZT07 1266 aa14.82□□□□□ -0.04
SMPD4-213ENST00000454468 ARHGEF40Q8TER5 1519 aa14.81□□□□□ -0.04
SMPD4-213ENST00000454468 ANKLE2Q86XL3 938 aa14.81□□□□□ -0.04
SMPD4-213ENST00000454468 PHF8Q9UPP1 1060 aa14.81□□□□□ -0.04
SMPD4-213ENST00000454468 GNAT3A8MTJ3 354 aa14.8□□□□□ -0.04
SMPD4-213ENST00000454468 CLTCQ00610 1675 aaKnown RBP14.8□□□□□ -0.04
SMPD4-213ENST00000454468 ZNF330Q9Y3S2 320 aaPredicted RBP14.8□□□□□ -0.04
SMPD4-213ENST00000454468 CD163L1Q9NR16 1453 aa14.8□□□□□ -0.04
SMPD4-213ENST00000454468 ZC3H13Q5T200 1668 aaKnown RBP14.8□□□□□ -0.04
SMPD4-213ENST00000454468 CDC45O75419 566 aa14.79□□□□□ -0.04
SMPD4-213ENST00000454468 PODXL2Q9NZ53 605 aa14.79□□□□□ -0.04
SMPD4-213ENST00000454468 ZNF530Q6P9A1 599 aaPredicted RBP14.79□□□□□ -0.04
SMPD4-213ENST00000454468 PROSER2Q86WR7 435 aaPredicted RBP14.79□□□□□ -0.04
SMPD4-213ENST00000454468 SIRT2Q8IXJ6 389 aa14.79□□□□□ -0.04
SMPD4-213ENST00000454468 NLRP2Q9NX02 1062 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms