RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PBXIP1Q96AQ6 731 aa6.86□□□□□ -1.31
HMGB1P15-201ENST00000453854 ATP13A2Q9NQ11 1180 aa6.86□□□□□ -1.31
HMGB1P15-201ENST00000453854 ZC3H4Q9UPT8 1303 aaKnown RBP6.85□□□□□ -1.31
HMGB1P15-201ENST00000453854 C11orf95C9JLR9 678 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P15-201ENST00000453854 SNRPBP14678 240 aaKnown RBP6.85□□□□□ -1.31
HMGB1P15-201ENST00000453854 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
HMGB1P15-201ENST00000453854 EHBP1Q8NDI1 1231 aa6.85□□□□□ -1.31
HMGB1P15-201ENST00000453854 UCN2Q96RP3 112 aa6.85□□□□□ -1.31
HMGB1P15-201ENST00000453854 FKBPLQ9UIM3 349 aa6.85□□□□□ -1.31
HMGB1P15-201ENST00000453854 ACIN1Q9UKV3 1341 aaKnown RBP6.84□□□□□ -1.31
HMGB1P15-201ENST00000453854 PALM3A6NDB9 673 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P15-201ENST00000453854 NR1H3Q13133 447 aa6.84□□□□□ -1.31
HMGB1P15-201ENST00000453854 FBXO45P0C2W1 286 aa6.83□□□□□ -1.32
HMGB1P15-201ENST00000453854 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMGB1P15-201ENST00000453854 SEMA3FQ13275 785 aa6.83□□□□□ -1.32
HMGB1P15-201ENST00000453854 TREML4Q6UXN2 200 aa6.83□□□□□ -1.32
HMGB1P15-201ENST00000453854 ZNF511Q8NB15 262 aa6.83□□□□□ -1.32
HMGB1P15-201ENST00000453854 TLL2Q9Y6L7 1015 aa6.83□□□□□ -1.32
HMGB1P15-201ENST00000453854 ZBBXA8MT70 800 aa6.82□□□□□ -1.32
HMGB1P15-201ENST00000453854 KCTD17Q8N5Z5 321 aa6.82□□□□□ -1.32
HMGB1P15-201ENST00000453854 MAP10Q9P2G4 905 aa6.82□□□□□ -1.32
HMGB1P15-201ENST00000453854 TFIP11Q9UBB9 837 aaKnown RBP6.82□□□□□ -1.32
HMGB1P15-201ENST00000453854 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P15-201ENST00000453854 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
HMGB1P15-201ENST00000453854 PDE4CQ08493 712 aa6.81□□□□□ -1.32
HMGB1P15-201ENST00000453854 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
HMGB1P15-201ENST00000453854 GPSM3Q9Y4H4 160 aa6.81□□□□□ -1.32
HMGB1P15-201ENST00000453854 RFX1P22670 979 aa6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 LMOD1P29536 600 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 CTHP32929 405 aa6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 NFX1Q12986 1120 aaKnown RBP6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 NFATC2IPQ8NCF5 419 aa6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 TRIM47Q96LD4 638 aa6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 MAFBQ9Y5Q3 323 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P15-201ENST00000453854 BMP1P13497 986 aa6.79□□□□□ -1.32
HMGB1P15-201ENST00000453854 PDXDC2PQ6P474 469 aa6.79□□□□□ -1.32
HMGB1P15-201ENST00000453854 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
HMGB1P15-201ENST00000453854 TRIM46Q7Z4K8 759 aa6.79□□□□□ -1.32
HMGB1P15-201ENST00000453854 FOXJ1Q92949 421 aa6.79□□□□□ -1.32
HMGB1P15-201ENST00000453854 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
HMGB1P15-201ENST00000453854 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
HMGB1P15-201ENST00000453854 ATP9BO43861 1147 aa6.78□□□□□ -1.32
HMGB1P15-201ENST00000453854 ATG7O95352 703 aa6.78□□□□□ -1.32
HMGB1P15-201ENST00000453854 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
HMGB1P15-201ENST00000453854 ARMC2Q8NEN0 867 aa6.78□□□□□ -1.32
HMGB1P15-201ENST00000453854 WASF2Q9Y6W5 498 aa6.78□□□□□ -1.32
HMGB1P15-201ENST00000453854 CAPN5O15484 640 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P15-201ENST00000453854 VARSP26640 1264 aaKnown RBP6.77□□□□□ -1.33
HMGB1P15-201ENST00000453854 WFS1O76024 890 aa6.76□□□□□ -1.33
HMGB1P15-201ENST00000453854 MCCD1P59942 119 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P15-201ENST00000453854 PTK2Q05397 1052 aa6.76□□□□□ -1.33
HMGB1P15-201ENST00000453854 PIK3CDO00329 1044 aa6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 NNTQ13423 1086 aa6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 KANK4Q5T7N3 995 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 NBPF14Q5TI25 921 aa6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 PLEKHM2Q8IWE5 1019 aa6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 PHTF2Q8N3S3 785 aa6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 ZNF592Q92610 1267 aa6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 SENP2Q9HC62 589 aa6.75□□□□□ -1.33
HMGB1P15-201ENST00000453854 CSB-PGBD3P0DP91 1061 aa6.74□□□□□ -1.33
HMGB1P15-201ENST00000453854 MPNDQ8N594 471 aa6.74□□□□□ -1.33
HMGB1P15-201ENST00000453854 KLF16Q9BXK1 252 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P15-201ENST00000453854 CEP126Q9P2H0 1117 aa6.74□□□□□ -1.33
HMGB1P15-201ENST00000453854 CHIC2Q9UKJ5 165 aa6.74□□□□□ -1.33
HMGB1P15-201ENST00000453854 TMEM88BA6NKF7 163 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 TIMP2P16035 220 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 ELOAQ14241 798 aaKnown RBP6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 SH3BP5LQ7L8J4 393 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 AEBP1Q8IUX7 1158 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 FAM174AQ8TBP5 190 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 KIFC2Q96AC6 838 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 CDK15Q96Q40 435 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 VRTNQ9H8Y1 702 aa6.73□□□□□ -1.33
HMGB1P15-201ENST00000453854 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
HMGB1P15-201ENST00000453854 BRD1O95696 1058 aa6.72□□□□□ -1.33
HMGB1P15-201ENST00000453854 ADH1CP00326 375 aa6.72□□□□□ -1.33
HMGB1P15-201ENST00000453854 NR3C2P08235 984 aa6.72□□□□□ -1.33
HMGB1P15-201ENST00000453854 SH3RF1Q7Z6J0 888 aa6.72□□□□□ -1.33
HMGB1P15-201ENST00000453854 ZFP42Q96MM3 310 aa6.72□□□□□ -1.33
HMGB1P15-201ENST00000453854 USP17L3A6NCW0 530 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 USP17L4A6NCW7 530 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 USP17L5A8MUK1 530 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 PATL2C9JE40 543 aaKnown RBP6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 LZTS3O60299 673 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 GRM5P41594 1212 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 ARID5BQ14865 1188 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 CDCA8Q53HL2 280 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 USP17L2Q6R6M4 530 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 USP17L1Q7RTZ2 530 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 ADAM32Q8TC27 787 aa6.71□□□□□ -1.34
HMGB1P15-201ENST00000453854 SKIP12755 728 aa6.7□□□□□ -1.34
HMGB1P15-201ENST00000453854 WDR4P57081 412 aaKnown RBP6.7□□□□□ -1.34
HMGB1P15-201ENST00000453854 KCNA1Q09470 495 aa6.7□□□□□ -1.34
HMGB1P15-201ENST00000453854 ARHGAP9Q9BRR9 750 aa6.7□□□□□ -1.34
HMGB1P15-201ENST00000453854 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
HMGB1P15-201ENST00000453854 CCDC9Q9Y3X0 531 aaKnown RBP6.7□□□□□ -1.34
HMGB1P15-201ENST00000453854 VEGFBP49765 207 aa6.69□□□□□ -1.34
HMGB1P15-201ENST00000453854 AGERQ15109 404 aa6.69□□□□□ -1.34
HMGB1P15-201ENST00000453854 SLFNL1Q499Z3 407 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms