RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TESK2Q96S53 571 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 IGSF3O75054 1194 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 KDM4AO75164 1064 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 ADCY5O95622 1261 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 CYP2C19P33261 490 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 PSEN1P49768 467 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 GTF2A1P52655 376 aaPredicted RBP10.12□□□□□ -0.79
SMCO1-202ENST00000452776 NOM1Q5C9Z4 860 aaKnown RBP10.12□□□□□ -0.79
SMCO1-202ENST00000452776 MUM1L1Q5H9M0 696 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 GCC1Q96CN9 775 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 MYCBPQ99417 103 aaPredicted RBP10.12□□□□□ -0.79
SMCO1-202ENST00000452776 KDM2AQ9Y2K7 1162 aa10.12□□□□□ -0.79
SMCO1-202ENST00000452776 PTPRGP23470 1445 aa10.11□□□□□ -0.79
SMCO1-202ENST00000452776 GPS2Q13227 327 aa10.11□□□□□ -0.79
SMCO1-202ENST00000452776 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
SMCO1-202ENST00000452776 CCDC112Q8NEF3 446 aa10.11□□□□□ -0.79
SMCO1-202ENST00000452776 NOL10Q9BSC4 688 aaKnown RBP10.11□□□□□ -0.79
SMCO1-202ENST00000452776 CHMP4AQ9BY43 222 aa10.11□□□□□ -0.79
SMCO1-202ENST00000452776 NUP160Q12769 1436 aa10.11□□□□□ -0.79
SMCO1-202ENST00000452776 PRAG1Q86YV5 1406 aa10.11□□□□□ -0.79
SMCO1-202ENST00000452776 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
SMCO1-202ENST00000452776 V9GYY5 206 aaPredicted RBP10.1□□□□□ -0.79
SMCO1-202ENST00000452776 FAM135AQ9P2D6 1515 aa10.1□□□□□ -0.79
SMCO1-202ENST00000452776 IPO8O15397 1037 aaKnown RBP10.1□□□□□ -0.79
SMCO1-202ENST00000452776 CDC45O75419 566 aa10.1□□□□□ -0.79
SMCO1-202ENST00000452776 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
SMCO1-202ENST00000452776 KIAA0586Q9BVV6 1533 aa10.09□□□□□ -0.79
SMCO1-202ENST00000452776 LRRIQ1Q96JM4 1722 aa10.09□□□□□ -0.79
SMCO1-202ENST00000452776 CEP170Q5SW79 1584 aa10.09□□□□□ -0.79
SMCO1-202ENST00000452776 HSP90B1P14625 803 aaKnown RBP10.09□□□□□ -0.79
SMCO1-202ENST00000452776 TPM4P67936 248 aa10.09□□□□□ -0.79
SMCO1-202ENST00000452776 RNF214Q8ND24 703 aa10.09□□□□□ -0.79
SMCO1-202ENST00000452776 NCAPGQ9BPX3 1015 aa10.09□□□□□ -0.79
SMCO1-202ENST00000452776 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
SMCO1-202ENST00000452776 ASXL1Q8IXJ9 1541 aa10.09□□□□□ -0.79
SMCO1-202ENST00000452776 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 MAGI3Q5TCQ9 1506 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 ABCA10Q8WWZ4 1543 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 RLBP1P12271 317 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 LMOD3Q0VAK6 560 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 CCDC183Q5T5S1 534 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 ICE2Q659A1 982 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 CASC1Q6TDU7 716 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 RUNDC1Q96C34 613 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 TTC12Q9H892 705 aaPredicted RBP10.08□□□□□ -0.8
SMCO1-202ENST00000452776 SMC4Q9NTJ3 1288 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 CCDC141Q6ZP82 1450 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 PRDM15P57071 1507 aaPredicted RBP10.08□□□□□ -0.8
SMCO1-202ENST00000452776 TRPM1Q7Z4N2 1603 aa10.08□□□□□ -0.8
SMCO1-202ENST00000452776 KIF2AO00139 706 aaPredicted RBP10.07□□□□□ -0.8
SMCO1-202ENST00000452776 ATP8B1O43520 1251 aa10.07□□□□□ -0.8
SMCO1-202ENST00000452776 NOP2P46087 812 aaKnown RBP10.07□□□□□ -0.8
SMCO1-202ENST00000452776 HNRNPH2P55795 449 aaKnown RBP10.07□□□□□ -0.8
SMCO1-202ENST00000452776 CCDC146Q8IYE0 955 aa10.07□□□□□ -0.8
SMCO1-202ENST00000452776 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
SMCO1-202ENST00000452776 SYNMO15061 1565 aa10.07□□□□□ -0.8
SMCO1-202ENST00000452776 EIF4G3O43432 1585 aaKnown RBP10.07□□□□□ -0.8
SMCO1-202ENST00000452776 EIF2AK4Q9P2K8 1649 aaKnown RBP10.07□□□□□ -0.8
SMCO1-202ENST00000452776 TUBB4AP04350 444 aa10.07□□□□□ -0.8
SMCO1-202ENST00000452776 RSPH14Q9UHP6 348 aa10.07□□□□□ -0.8
SMCO1-202ENST00000452776 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.07□□□□□ -0.8
SMCO1-202ENST00000452776 DISP3Q9P2K9 1392 aa10.07□□□□□ -0.8
SMCO1-202ENST00000452776 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
SMCO1-202ENST00000452776 POLR3AO14802 1390 aaPredicted RBP10.06□□□□□ -0.8
SMCO1-202ENST00000452776 NUP155O75694 1391 aa10.06□□□□□ -0.8
SMCO1-202ENST00000452776 CD2BP2O95400 341 aaKnown RBP10.06□□□□□ -0.8
SMCO1-202ENST00000452776 CASQ1P31415 396 aa10.06□□□□□ -0.8
SMCO1-202ENST00000452776 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
SMCO1-202ENST00000452776 RPAINQ86UA6 219 aa10.06□□□□□ -0.8
SMCO1-202ENST00000452776 JARID2Q92833 1246 aaPredicted RBP10.06□□□□□ -0.8
SMCO1-202ENST00000452776 ERO1AQ96HE7 468 aa10.06□□□□□ -0.8
SMCO1-202ENST00000452776 INTS4Q96HW7 963 aaKnown RBP10.06□□□□□ -0.8
SMCO1-202ENST00000452776 NEMFO60524 1076 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 MX1P20591 662 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 GUCY2CP25092 1073 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
SMCO1-202ENST00000452776 RAD51AP2Q09MP3 1159 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 AEBP1Q8IUX7 1158 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 NESP48681 1621 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 ANKRD50Q9ULJ7 1429 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 KIF1CO43896 1103 aaKnown RBP10.05□□□□□ -0.8
SMCO1-202ENST00000452776 DHX16O60231 1041 aaKnown RBP10.05□□□□□ -0.8
SMCO1-202ENST00000452776 BRD1O95696 1058 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.05□□□□□ -0.8
SMCO1-202ENST00000452776 ZBTB40Q9NUA8 1239 aa10.05□□□□□ -0.8
SMCO1-202ENST00000452776 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.05□□□□□ -0.8
SMCO1-202ENST00000452776 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
SMCO1-202ENST00000452776 TNNT1P13805 278 aa10.04□□□□□ -0.8
SMCO1-202ENST00000452776 INTS3Q68E01 1043 aaKnown RBP10.04□□□□□ -0.8
SMCO1-202ENST00000452776 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
SMCO1-202ENST00000452776 DEF6Q9H4E7 631 aa10.04□□□□□ -0.8
SMCO1-202ENST00000452776 CCDC171Q6TFL3 1326 aa10.04□□□□□ -0.8
SMCO1-202ENST00000452776 ABCC10Q5T3U5 1492 aa10.04□□□□□ -0.8
SMCO1-202ENST00000452776 WDR7Q9Y4E6 1490 aa10.04□□□□□ -0.8
SMCO1-202ENST00000452776 A0A1B0GUL7 405 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 ERICH4A6NGS2 130 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 SOX12O15370 315 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 CALRP27797 417 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms