RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
USP46-202ENST00000451218 ABCC6O95255 1503 aa8.76□□□□□ -1.01
USP46-202ENST00000451218 PARP4Q9UKK3 1724 aaKnown RBP8.76□□□□□ -1.01
USP46-202ENST00000451218 ZNF853P0CG23 659 aa8.76□□□□□ -1.01
USP46-202ENST00000451218 GOLGA2Q08379 1002 aa8.76□□□□□ -1.01
USP46-202ENST00000451218 RRS1Q15050 365 aaKnown RBP8.76□□□□□ -1.01
USP46-202ENST00000451218 PPP4R2Q9NY27 417 aa8.76□□□□□ -1.01
USP46-202ENST00000451218 HAP1P54257 671 aaPredicted RBP8.75□□□□□ -1.01
USP46-202ENST00000451218 TNNQ9UQP3 1299 aa8.75□□□□□ -1.01
USP46-202ENST00000451218 C5P01031 1676 aa8.75□□□□□ -1.01
USP46-202ENST00000451218 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
USP46-202ENST00000451218 TMPOP42166 694 aaKnown RBP8.75□□□□□ -1.01
USP46-202ENST00000451218 HDGFL2Q7Z4V5 671 aaPredicted RBP8.75□□□□□ -1.01
USP46-202ENST00000451218 RRP7AQ9Y3A4 280 aaKnown RBP8.75□□□□□ -1.01
USP46-202ENST00000451218 BCAR3O75815 825 aa8.75□□□□□ -1.01
USP46-202ENST00000451218 WDR43Q15061 677 aaKnown RBP eCLIP8.75□□□□□ -1.01
USP46-202ENST00000451218 EID1Q9Y6B2 187 aa8.75□□□□□ -1.01
USP46-202ENST00000451218 MSH6P52701 1360 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 B4GALNT3Q6L9W6 998 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 WDR63Q8IWG1 891 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 EIF4A2Q14240 407 aaKnown RBP8.74□□□□□ -1.01
USP46-202ENST00000451218 RBM33Q96EV2 1170 aaKnown RBP8.74□□□□□ -1.01
USP46-202ENST00000451218 TTC21AQ8NDW8 1320 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 NCOA3Q9Y6Q9 1424 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 ZNF692Q9BU19 519 aaPredicted RBP8.74□□□□□ -1.01
USP46-202ENST00000451218 USP19O94966 1318 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 MAP3K19Q56UN5 1328 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 FANCIQ9NVI1 1328 aa8.74□□□□□ -1.01
USP46-202ENST00000451218 NGEFQ8N5V2 710 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.73□□□□□ -1.01
USP46-202ENST00000451218 ARHGEF10O15013 1369 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 SBNO1A3KN83 1393 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 UBR2Q8IWV8 1755 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 E9PSI1 815 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 RLBP1P12271 317 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 AEBP1Q8IUX7 1158 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 TOGARAM1Q9Y4F4 1720 aa8.73□□□□□ -1.01
USP46-202ENST00000451218 IGSF1Q8N6C5 1336 aa8.72□□□□□ -1.01
USP46-202ENST00000451218 COL16A1Q07092 1604 aaPredicted RBP8.72□□□□□ -1.01
USP46-202ENST00000451218 RARSP54136 660 aaKnown RBP8.72□□□□□ -1.01
USP46-202ENST00000451218 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
USP46-202ENST00000451218 COL22A1Q8NFW1 1626 aaPredicted RBP8.72□□□□□ -1.01
USP46-202ENST00000451218 KIF24Q5T7B8 1368 aa8.72□□□□□ -1.01
USP46-202ENST00000451218 CACNA1FO60840 1977 aa8.72□□□□□ -1.01
USP46-202ENST00000451218 IL16Q14005 1332 aa8.72□□□□□ -1.01
USP46-202ENST00000451218 LTBP4Q8N2S1 1624 aa8.72□□□□□ -1.01
USP46-202ENST00000451218 CRBNQ96SW2 442 aa8.71□□□□□ -1.01
USP46-202ENST00000451218 FCHSD2O94868 740 aa8.71□□□□□ -1.01
USP46-202ENST00000451218 PMFBP1Q8TBY8 1022 aa8.71□□□□□ -1.01
USP46-202ENST00000451218 DIAPH1O60610 1272 aaKnown RBP8.71□□□□□ -1.02
USP46-202ENST00000451218 HSP90AB2PQ58FF8 381 aa8.71□□□□□ -1.02
USP46-202ENST00000451218 SKAP1Q86WV1 359 aa8.71□□□□□ -1.02
USP46-202ENST00000451218 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
USP46-202ENST00000451218 MYCNP04198 464 aaPredicted RBP8.71□□□□□ -1.02
USP46-202ENST00000451218 RNF216Q9NWF9 866 aaPredicted RBP8.7□□□□□ -1.02
USP46-202ENST00000451218 RTL1A6NKG5 1358 aa8.7□□□□□ -1.02
USP46-202ENST00000451218 PLCH1Q4KWH8 1693 aa8.7□□□□□ -1.02
USP46-202ENST00000451218 FLT4P35916 1363 aa8.69□□□□□ -1.02
USP46-202ENST00000451218 TSR2Q969E8 191 aaKnown RBP8.69□□□□□ -1.02
USP46-202ENST00000451218 U2AF1L5P0DN76 240 aaPredicted RBP8.69□□□□□ -1.02
USP46-202ENST00000451218 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
USP46-202ENST00000451218 U2AF1Q01081 240 aaKnown RBP eCLIP8.69□□□□□ -1.02
USP46-202ENST00000451218 BRPF1P55201 1214 aaPredicted RBP8.68□□□□□ -1.02
USP46-202ENST00000451218 ORAI2Q96SN7 254 aa8.68□□□□□ -1.02
USP46-202ENST00000451218 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
USP46-202ENST00000451218 MRC1P22897 1456 aa8.68□□□□□ -1.02
USP46-202ENST00000451218 COG3Q96JB2 828 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 TMEM94Q12767 1356 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 FAM83GA6ND36 823 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 HOXC9P31274 260 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 NFE2L2Q16236 605 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 HMOX1P09601 288 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 THUMPD2Q9BTF0 503 aaKnown RBP8.67□□□□□ -1.02
USP46-202ENST00000451218 CEMIPQ8WUJ3 1361 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 LAMB4A4D0S4 1761 aa8.67□□□□□ -1.02
USP46-202ENST00000451218 TSPYL6Q8N831 410 aa8.66□□□□□ -1.02
USP46-202ENST00000451218 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
USP46-202ENST00000451218 EYA1Q99502 592 aa8.65□□□□□ -1.02
USP46-202ENST00000451218 ROBO1Q9Y6N7 1651 aa8.65□□□□□ -1.02
USP46-202ENST00000451218 IGHDP01880 384 aa8.65□□□□□ -1.02
USP46-202ENST00000451218 NUP188Q5SRE5 1749 aa8.65□□□□□ -1.02
USP46-202ENST00000451218 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.03
USP46-202ENST00000451218 FOXO3O43524 673 aa8.64□□□□□ -1.03
USP46-202ENST00000451218 MBIPQ9NS73 344 aa8.64□□□□□ -1.03
USP46-202ENST00000451218 AHDC1Q5TGY3 1603 aaPredicted RBP8.64□□□□□ -1.03
USP46-202ENST00000451218 RIPK4P57078 832 aa8.64□□□□□ -1.03
USP46-202ENST00000451218 AXIN2Q9Y2T1 843 aa8.64□□□□□ -1.03
USP46-202ENST00000451218 VAMP4O75379 141 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 EXOSC9Q06265 439 aaKnown RBP8.63□□□□□ -1.03
USP46-202ENST00000451218 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
USP46-202ENST00000451218 HSPA2P54652 639 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 SSH1Q8WYL5 1049 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 MEGF6O75095 1541 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
USP46-202ENST00000451218 NEUROD2Q15784 382 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 NEFLP07196 543 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 PDE3AQ14432 1141 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
USP46-202ENST00000451218 HEG1Q9ULI3 1381 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms