RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 GABPB1Q06547 395 aaPredicted RBP10.56□□□□□ -0.72
LSM5-208ENST00000450169 MVPQ14764 893 aaKnown RBP10.56□□□□□ -0.72
LSM5-208ENST00000450169 GPT2Q8TD30 523 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 NUP155O75694 1391 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 FKBP5Q13451 457 aaPredicted RBP10.56□□□□□ -0.72
LSM5-208ENST00000450169 E2F4Q16254 413 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 RNF214Q8ND24 703 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 ANKRD7Q92527 254 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 OGFRQ9NZT2 677 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 PCDHB13Q9Y5F0 798 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 ANKRD50Q9ULJ7 1429 aa10.56□□□□□ -0.72
LSM5-208ENST00000450169 CCDC66A2RUB6 948 aa10.55□□□□□ -0.72
LSM5-208ENST00000450169 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
LSM5-208ENST00000450169 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
LSM5-208ENST00000450169 BCL2L13Q9BXK5 485 aa10.55□□□□□ -0.72
LSM5-208ENST00000450169 WDR7Q9Y4E6 1490 aa10.55□□□□□ -0.72
LSM5-208ENST00000450169 ZMYND10O75800 440 aa10.55□□□□□ -0.72
LSM5-208ENST00000450169 TMEM63CQ9P1W3 806 aa10.55□□□□□ -0.72
LSM5-208ENST00000450169 ABCC10Q5T3U5 1492 aa10.55□□□□□ -0.72
LSM5-208ENST00000450169 AK9Q5TCS8 1911 aa10.54□□□□□ -0.72
LSM5-208ENST00000450169 CYP2E1P05181 493 aaPredicted RBP10.54□□□□□ -0.72
LSM5-208ENST00000450169 SPDYE1Q8NFV5 336 aaPredicted RBP10.54□□□□□ -0.72
LSM5-208ENST00000450169 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
LSM5-208ENST00000450169 SPTLC3Q9NUV7 552 aa10.54□□□□□ -0.72
LSM5-208ENST00000450169 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
LSM5-208ENST00000450169 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
LSM5-208ENST00000450169 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
LSM5-208ENST00000450169 TIGD1Q96MW7 591 aa10.53□□□□□ -0.72
LSM5-208ENST00000450169 DIAPH3Q9NSV4 1193 aa10.53□□□□□ -0.72
LSM5-208ENST00000450169 CFDP1Q9UEE9 299 aaPredicted RBP10.53□□□□□ -0.72
LSM5-208ENST00000450169 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
LSM5-208ENST00000450169 CROCC2H7BZ55 1655 aa10.52□□□□□ -0.72
LSM5-208ENST00000450169 PLEKHD1A6NEE1 506 aa10.52□□□□□ -0.73
LSM5-208ENST00000450169 SLFN14P0C7P3 912 aa10.52□□□□□ -0.73
LSM5-208ENST00000450169 C17orf53Q8N3J3 647 aaPredicted RBP10.52□□□□□ -0.73
LSM5-208ENST00000450169 CHMP4AQ9BY43 222 aa10.52□□□□□ -0.73
LSM5-208ENST00000450169 PKP1Q13835 747 aa10.51□□□□□ -0.73
LSM5-208ENST00000450169 TSPY26PQ9H489 355 aa10.51□□□□□ -0.73
LSM5-208ENST00000450169 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
LSM5-208ENST00000450169 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
LSM5-208ENST00000450169 CTIFO43310 598 aaKnown RBP10.51□□□□□ -0.73
LSM5-208ENST00000450169 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
LSM5-208ENST00000450169 BMP2KLQ5H9B9 411 aa10.51□□□□□ -0.73
LSM5-208ENST00000450169 DZIP1LQ8IYY4 767 aaKnown RBP10.51□□□□□ -0.73
LSM5-208ENST00000450169 MBD3O95983 291 aa10.5□□□□□ -0.73
LSM5-208ENST00000450169 ZKSCAN2Q63HK3 967 aa10.5□□□□□ -0.73
LSM5-208ENST00000450169 MPNDQ8N594 471 aa10.5□□□□□ -0.73
LSM5-208ENST00000450169 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
LSM5-208ENST00000450169 TTC12Q9H892 705 aaPredicted RBP10.5□□□□□ -0.73
LSM5-208ENST00000450169 SYNMO15061 1565 aa10.5□□□□□ -0.73
LSM5-208ENST00000450169 NUCB1Q02818 461 aa10.5□□□□□ -0.73
LSM5-208ENST00000450169 NSFL1CQ9UNZ2 370 aaKnown RBP10.5□□□□□ -0.73
LSM5-208ENST00000450169 RGS22Q8NE09 1264 aa10.49□□□□□ -0.73
LSM5-208ENST00000450169 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
LSM5-208ENST00000450169 CDC42BPBQ9Y5S2 1711 aa10.49□□□□□ -0.73
LSM5-208ENST00000450169 EIF2AK4Q9P2K8 1649 aaKnown RBP10.49□□□□□ -0.73
LSM5-208ENST00000450169 TULP2O00295 520 aa10.49□□□□□ -0.73
LSM5-208ENST00000450169 LNPKQ9C0E8 428 aa10.49□□□□□ -0.73
LSM5-208ENST00000450169 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
LSM5-208ENST00000450169 CTNNA3Q9UI47 895 aa10.49□□□□□ -0.73
LSM5-208ENST00000450169 TTC37Q6PGP7 1564 aa10.48□□□□□ -0.73
LSM5-208ENST00000450169 TERF2Q15554 542 aa10.48□□□□□ -0.73
LSM5-208ENST00000450169 RGL3Q3MIN7 710 aa10.48□□□□□ -0.73
LSM5-208ENST00000450169 TBC1D9Q6ZT07 1266 aa10.48□□□□□ -0.73
LSM5-208ENST00000450169 DDX19BQ9UMR2 479 aa10.48□□□□□ -0.73
LSM5-208ENST00000450169 NCBP1Q09161 790 aaKnown RBP10.47□□□□□ -0.73
LSM5-208ENST00000450169 RABEP1Q15276 862 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 CALCOCO1Q9P1Z2 691 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
LSM5-208ENST00000450169 PREX2Q70Z35 1606 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 A2MP01023 1474 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 CAPN2P17655 700 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 CHD1LQ86WJ1 897 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 ITPRIPQ8IWB1 547 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 TSPYL1Q9H0U9 437 aa10.47□□□□□ -0.73
LSM5-208ENST00000450169 TRIM6-TRIM34B2RNG4 842 aa10.46□□□□□ -0.73
LSM5-208ENST00000450169 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.73
LSM5-208ENST00000450169 UVSSAQ2YD98 709 aa10.46□□□□□ -0.73
LSM5-208ENST00000450169 SYAP1Q96A49 352 aaPredicted RBP10.46□□□□□ -0.73
LSM5-208ENST00000450169 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
LSM5-208ENST00000450169 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
LSM5-208ENST00000450169 SAMD9LQ8IVG5 1584 aa10.46□□□□□ -0.73
LSM5-208ENST00000450169 ZCCHC11Q5TAX3 1644 aaKnown RBP10.46□□□□□ -0.73
LSM5-208ENST00000450169 CCDC141Q6ZP82 1450 aa10.46□□□□□ -0.74
LSM5-208ENST00000450169 SYCP1Q15431 976 aa10.46□□□□□ -0.74
LSM5-208ENST00000450169 CERS3Q8IU89 383 aa10.46□□□□□ -0.74
LSM5-208ENST00000450169 WDR63Q8IWG1 891 aa10.46□□□□□ -0.74
LSM5-208ENST00000450169 SECISBP2LQ93073 1101 aaKnown RBP10.46□□□□□ -0.74
LSM5-208ENST00000450169 ZDHHC9Q9Y397 364 aa10.46□□□□□ -0.74
LSM5-208ENST00000450169 RRP7AQ9Y3A4 280 aaKnown RBP10.46□□□□□ -0.74
LSM5-208ENST00000450169 MORC2Q9Y6X9 1032 aaPredicted RBP10.46□□□□□ -0.74
LSM5-208ENST00000450169 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.45□□□□□ -0.74
LSM5-208ENST00000450169 PHF14O94880 888 aa10.45□□□□□ -0.74
LSM5-208ENST00000450169 ADCY5O95622 1261 aa10.45□□□□□ -0.74
LSM5-208ENST00000450169 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
LSM5-208ENST00000450169 TRIM27P14373 513 aa10.45□□□□□ -0.74
LSM5-208ENST00000450169 KIAA1524Q8TCG1 905 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms