RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 DCCP43146 1447 aa9.93□□□□□ -0.82
TRIM4-204ENST00000447480 SBNO2Q9Y2G9 1366 aa9.93□□□□□ -0.82
TRIM4-204ENST00000447480 ARHGEF28Q8N1W1 1705 aaKnown RBP9.93□□□□□ -0.82
TRIM4-204ENST00000447480 MSH6P52701 1360 aa9.92□□□□□ -0.82
TRIM4-204ENST00000447480 CENPJQ9HC77 1338 aaPredicted RBP9.92□□□□□ -0.82
TRIM4-204ENST00000447480 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
TRIM4-204ENST00000447480 METP08581 1390 aa9.91□□□□□ -0.82
TRIM4-204ENST00000447480 PDE4AP27815 886 aa9.91□□□□□ -0.82
TRIM4-204ENST00000447480 NBR1Q14596 966 aa9.91□□□□□ -0.82
TRIM4-204ENST00000447480 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
TRIM4-204ENST00000447480 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
TRIM4-204ENST00000447480 USP47Q96K76 1375 aa9.9□□□□□ -0.82
TRIM4-204ENST00000447480 QRICH2Q9H0J4 1663 aa9.9□□□□□ -0.82
TRIM4-204ENST00000447480 RRP1P56182 461 aaKnown RBP9.9□□□□□ -0.82
TRIM4-204ENST00000447480 CCDC184Q52MB2 194 aa9.9□□□□□ -0.82
TRIM4-204ENST00000447480 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
TRIM4-204ENST00000447480 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
TRIM4-204ENST00000447480 UBE2Q2Q8WVN8 375 aa9.9□□□□□ -0.82
TRIM4-204ENST00000447480 PUS7Q96PZ0 661 aaKnown RBP9.9□□□□□ -0.82
TRIM4-204ENST00000447480 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.9□□□□□ -0.82
TRIM4-204ENST00000447480 ADGRB2O60241 1585 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 EVC2Q86UK5 1308 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 MYBBP1AQ9BQG0 1328 aaKnown RBP9.89□□□□□ -0.83
TRIM4-204ENST00000447480 C2orf72A6NCS6 295 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 SNPHO15079 494 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 ATF3P18847 181 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 TMF1P82094 1093 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 NBPF8Q3BBV2 869 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 C19orf44Q9H6X5 657 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 STK26Q9P289 416 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 TRAK1Q9UPV9 953 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 ITSN1Q15811 1721 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 ADGRL3Q9HAR2 1447 aa9.89□□□□□ -0.83
TRIM4-204ENST00000447480 CDC42BPGQ6DT37 1551 aa9.88□□□□□ -0.83
TRIM4-204ENST00000447480 ASXL1Q8IXJ9 1541 aa9.88□□□□□ -0.83
TRIM4-204ENST00000447480 NEFMP07197 916 aa9.88□□□□□ -0.83
TRIM4-204ENST00000447480 TMEM132EQ6IEE7 984 aa9.88□□□□□ -0.83
TRIM4-204ENST00000447480 RCAN3Q9UKA8 241 aa9.88□□□□□ -0.83
TRIM4-204ENST00000447480 NINLQ9Y2I6 1382 aa9.88□□□□□ -0.83
TRIM4-204ENST00000447480 KIF3CO14782 793 aa9.87□□□□□ -0.83
TRIM4-204ENST00000447480 TOM1O60784 492 aa9.87□□□□□ -0.83
TRIM4-204ENST00000447480 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
TRIM4-204ENST00000447480 PRAM1Q96QH2 718 aa9.87□□□□□ -0.83
TRIM4-204ENST00000447480 LRRC7Q96NW7 1537 aa9.87□□□□□ -0.83
TRIM4-204ENST00000447480 ZNF335Q9H4Z2 1342 aaPredicted RBP9.86□□□□□ -0.83
TRIM4-204ENST00000447480 ST18O60284 1047 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
TRIM4-204ENST00000447480 NBPF1Q3BBV0 1214 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 ANKARQ7Z5J8 1434 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 NLRP13Q86W25 1043 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 SPRYD3Q8NCJ5 442 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 TMEM94Q12767 1356 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 ATAD2Q6PL18 1390 aa9.86□□□□□ -0.83
TRIM4-204ENST00000447480 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
TRIM4-204ENST00000447480 PTPRUQ92729 1446 aa9.85□□□□□ -0.83
TRIM4-204ENST00000447480 AAMPQ13685 434 aa9.85□□□□□ -0.83
TRIM4-204ENST00000447480 DAXXQ9UER7 740 aaPredicted RBP9.85□□□□□ -0.83
TRIM4-204ENST00000447480 STRCP1A6NGW2 1772 aa9.85□□□□□ -0.83
TRIM4-204ENST00000447480 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
TRIM4-204ENST00000447480 KIF1AQ12756 1690 aa9.84□□□□□ -0.83
TRIM4-204ENST00000447480 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
TRIM4-204ENST00000447480 FAM43AQ8N2R8 423 aa9.84□□□□□ -0.83
TRIM4-204ENST00000447480 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
TRIM4-204ENST00000447480 NALCNQ8IZF0 1738 aa9.84□□□□□ -0.83
TRIM4-204ENST00000447480 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.84□□□□□ -0.83
TRIM4-204ENST00000447480 FMN2Q9NZ56 1722 aa9.83□□□□□ -0.84
TRIM4-204ENST00000447480 TULP4Q9NRJ4 1543 aa9.82□□□□□ -0.84
TRIM4-204ENST00000447480 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
TRIM4-204ENST00000447480 ST20-MTHFSA0A0A6YYL1 179 aa9.82□□□□□ -0.84
TRIM4-204ENST00000447480 WASLO00401 505 aaPredicted RBP9.82□□□□□ -0.84
TRIM4-204ENST00000447480 SRPK2P78362 688 aaKnown RBP9.82□□□□□ -0.84
TRIM4-204ENST00000447480 CENPQQ7L2Z9 268 aaPredicted RBP9.82□□□□□ -0.84
TRIM4-204ENST00000447480 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.82□□□□□ -0.84
TRIM4-204ENST00000447480 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
TRIM4-204ENST00000447480 DOK7Q18PE1 504 aa9.81□□□□□ -0.84
TRIM4-204ENST00000447480 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
TRIM4-204ENST00000447480 PARD3Q8TEW0 1356 aa9.8□□□□□ -0.84
TRIM4-204ENST00000447480 WAPLQ7Z5K2 1190 aa9.8□□□□□ -0.84
TRIM4-204ENST00000447480 ZNF710Q8N1W2 664 aa9.8□□□□□ -0.84
TRIM4-204ENST00000447480 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
TRIM4-204ENST00000447480 MINK1Q8N4C8 1332 aaPredicted RBP9.8□□□□□ -0.84
TRIM4-204ENST00000447480 POTEMA6NI47 508 aa9.79□□□□□ -0.84
TRIM4-204ENST00000447480 SAFB2Q14151 953 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRIM4-204ENST00000447480 GLIPR1L2Q4G1C9 344 aa9.79□□□□□ -0.84
TRIM4-204ENST00000447480 L1TD1Q5T7N2 865 aaKnown RBP9.79□□□□□ -0.84
TRIM4-204ENST00000447480 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
TRIM4-204ENST00000447480 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
TRIM4-204ENST00000447480 TERF2IPQ9NYB0 399 aa9.79□□□□□ -0.84
TRIM4-204ENST00000447480 PSME1Q06323 249 aa9.78□□□□□ -0.84
TRIM4-204ENST00000447480 DSG2Q14126 1118 aa9.78□□□□□ -0.84
TRIM4-204ENST00000447480 FAM161AQ3B820 660 aa9.78□□□□□ -0.84
TRIM4-204ENST00000447480 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
TRIM4-204ENST00000447480 MARVELD3Q96A59 401 aa9.78□□□□□ -0.84
TRIM4-204ENST00000447480 CDK19Q9BWU1 502 aa9.78□□□□□ -0.84
TRIM4-204ENST00000447480 ATP7BP35670 1465 aa9.78□□□□□ -0.84
TRIM4-204ENST00000447480 NFKBIBQ15653 356 aa9.77□□□□□ -0.85
TRIM4-204ENST00000447480 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.85
TRIM4-204ENST00000447480 SLAIN2Q9P270 581 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms