RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 PDE3AQ14432 1141 aa21.47■■□□□ 1.03
ATG9A-215ENST00000446716 ANO8Q9HCE9 1232 aaPredicted RBP21.46■■□□□ 1.03
ATG9A-215ENST00000446716 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
ATG9A-215ENST00000446716 NME9Q86XW9 330 aa21.46■■□□□ 1.03
ATG9A-215ENST00000446716 ADGRF5Q8IZF2 1346 aa21.45■■□□□ 1.03
ATG9A-215ENST00000446716 GCC1Q96CN9 775 aa21.45■■□□□ 1.03
ATG9A-215ENST00000446716 BCAR3O75815 825 aa21.44■■□□□ 1.02
ATG9A-215ENST00000446716 CEP126Q9P2H0 1117 aa21.44■■□□□ 1.02
ATG9A-215ENST00000446716 A0A0U1RQG5 324 aaPredicted RBP21.43■■□□□ 1.02
ATG9A-215ENST00000446716 ATF7IPQ6VMQ6 1270 aa21.43■■□□□ 1.02
ATG9A-215ENST00000446716 CCDC73Q6ZRK6 1079 aa21.43■■□□□ 1.02
ATG9A-215ENST00000446716 CHMP5Q9NZZ3 219 aa21.43■■□□□ 1.02
ATG9A-215ENST00000446716 RBM5P52756 815 aaKnown RBP eCLIP21.43■■□□□ 1.026e-6■■■□□ 17.8
ATG9A-215ENST00000446716 NUCB2P80303 420 aa21.42■■□□□ 1.02
ATG9A-215ENST00000446716 CADPS2Q86UW7 1296 aa21.42■■□□□ 1.02
ATG9A-215ENST00000446716 ATP2B2Q01814 1243 aa21.42■■□□□ 1.02
ATG9A-215ENST00000446716 NACAP1Q9BZK3 213 aa21.42■■□□□ 1.02
ATG9A-215ENST00000446716 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
ATG9A-215ENST00000446716 AMOTQ4VCS5 1084 aa21.42■■□□□ 1.02
ATG9A-215ENST00000446716 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
ATG9A-215ENST00000446716 USHBP1Q8N6Y0 703 aa21.42■■□□□ 1.02
ATG9A-215ENST00000446716 IPO7O95373 1038 aaKnown RBP21.41■■□□□ 1.02
ATG9A-215ENST00000446716 KRT28Q7Z3Y7 464 aa21.41■■□□□ 1.02
ATG9A-215ENST00000446716 SRGAP3O43295 1099 aa21.41■■□□□ 1.02
ATG9A-215ENST00000446716 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
ATG9A-215ENST00000446716 KDM4AO75164 1064 aa21.41■■□□□ 1.02
ATG9A-215ENST00000446716 DHX29Q7Z478 1369 aaKnown RBP21.41■■□□□ 1.02
ATG9A-215ENST00000446716 ZNF652Q9Y2D9 606 aa21.41■■□□□ 1.02
ATG9A-215ENST00000446716 PDZRN3Q9UPQ7 1066 aa21.4■■□□□ 1.02
ATG9A-215ENST00000446716 IGHMBP2P38935 993 aaKnown RBP21.4■■□□□ 1.02
ATG9A-215ENST00000446716 CCDC85AQ96PX6 553 aaPredicted RBP21.4■■□□□ 1.02
ATG9A-215ENST00000446716 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
ATG9A-215ENST00000446716 MCM10Q7L590 875 aa21.39■■□□□ 1.02
ATG9A-215ENST00000446716 ZPR1O75312 459 aa21.39■■□□□ 1.01
ATG9A-215ENST00000446716 MPRIPQ6WCQ1 1025 aa21.39■■□□□ 1.01
ATG9A-215ENST00000446716 MIS18AQ9NYP9 233 aa21.39■■□□□ 1.01
ATG9A-215ENST00000446716 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.39■■□□□ 1.01
ATG9A-215ENST00000446716 TNRQ92752 1358 aa21.39■■□□□ 1.01
ATG9A-215ENST00000446716 R3HCC1Q9Y3T6 440 aaKnown RBP21.38■■□□□ 1.01
ATG9A-215ENST00000446716 NCOA1Q15788 1441 aa21.38■■□□□ 1.01
ATG9A-215ENST00000446716 EXOC5O00471 708 aa21.38■■□□□ 1.01
ATG9A-215ENST00000446716 FKBP4Q02790 459 aaKnown RBP eCLIP21.38■■□□□ 1.01
ATG9A-215ENST00000446716 ATP2B1P20020 1258 aa21.37■■□□□ 1.01
ATG9A-215ENST00000446716 ZSCAN25Q6NSZ9 544 aa21.37■■□□□ 1.01
ATG9A-215ENST00000446716 THUMPD2Q9BTF0 503 aaKnown RBP21.37■■□□□ 1.01
ATG9A-215ENST00000446716 EMILIN1Q9Y6C2 1016 aa21.37■■□□□ 1.01
ATG9A-215ENST00000446716 AACSQ86V21 672 aa21.36■■□□□ 1.01
ATG9A-215ENST00000446716 DUSP27Q5VZP5 1158 aa21.36■■□□□ 1.01
ATG9A-215ENST00000446716 NEK4P51957 841 aa21.35■■□□□ 1.01
ATG9A-215ENST00000446716 PTPN23Q9H3S7 1636 aa21.35■■□□□ 1.01
ATG9A-215ENST00000446716 NOS1P29475 1434 aa21.35■■□□□ 1.01
ATG9A-215ENST00000446716 ZSCAN29Q8IWY8 852 aaPredicted RBP21.35■■□□□ 1.01
ATG9A-215ENST00000446716 TAF7Q15545 349 aaPredicted RBP21.34■■□□□ 1.01
ATG9A-215ENST00000446716 SASS6Q6UVJ0 657 aa21.34■■□□□ 1.01
ATG9A-215ENST00000446716 STK11IPQ8N1F8 1099 aa21.34■■□□□ 1.01
ATG9A-215ENST00000446716 DCTN1Q14203 1278 aa21.33■■□□□ 1.01
ATG9A-215ENST00000446716 RAI14Q9P0K7 980 aa21.33■■□□□ 1.01
ATG9A-215ENST00000446716 MVPQ14764 893 aaKnown RBP21.33■■□□□ 1.01
ATG9A-215ENST00000446716 FAM135AQ9P2D6 1515 aa21.33■■□□□ 1
ATG9A-215ENST00000446716 TEX14Q8IWB6 1497 aa21.32■■□□□ 1
ATG9A-215ENST00000446716 ASXL2Q76L83 1435 aa21.32■■□□□ 1
ATG9A-215ENST00000446716 LARP1Q6PKG0 1096 aaKnown RBP21.32■■□□□ 1
ATG9A-215ENST00000446716 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
ATG9A-215ENST00000446716 GOLGA6L1Q8N7Z2 621 aa21.32■■□□□ 1
ATG9A-215ENST00000446716 LRP2BPQ9P2M1 347 aa21.31■■□□□ 1
ATG9A-215ENST00000446716 UBAP1LF5GYI3 381 aa21.31■■□□□ 1
ATG9A-215ENST00000446716 TOM1O60784 492 aa21.31■■□□□ 1
ATG9A-215ENST00000446716 CCAR2Q8N163 923 aaKnown RBP21.3■■□□□ 1
ATG9A-215ENST00000446716 SDF4Q9BRK5 362 aa21.3■■□□□ 1
ATG9A-215ENST00000446716 MSH6P52701 1360 aa21.3■■□□□ 1
ATG9A-215ENST00000446716 PDCP20941 246 aa21.3■■□□□ 1
ATG9A-215ENST00000446716 IL1RAPL2Q9NP60 686 aa21.3■■□□□ 1
ATG9A-215ENST00000446716 METTL24Q5JXM2 366 aa21.29■■□□□ 1
ATG9A-215ENST00000446716 MAP4K4O95819 1239 aaPredicted RBP21.29■■□□□ 1
ATG9A-215ENST00000446716 TMOD2Q9NZR1 351 aa21.29■■□□□ 1
ATG9A-215ENST00000446716 MCM2P49736 904 aa21.28■■□□□ 1
ATG9A-215ENST00000446716 RPAP2Q8IXW5 612 aaPredicted RBP21.28■■□□□ 1
ATG9A-215ENST00000446716 ABCF2Q9UG63 623 aa21.28■■□□□ 1
ATG9A-215ENST00000446716 TDO2P48775 406 aa21.28■■□□□ 1
ATG9A-215ENST00000446716 SPINK5Q9NQ38 1064 aaPredicted RBP21.28■■□□□ 1
ATG9A-215ENST00000446716 IDH1O75874 414 aaKnown RBP21.27■■□□□ 1
ATG9A-215ENST00000446716 TRIM22Q8IYM9 498 aa21.27■■□□□ 1
ATG9A-215ENST00000446716 CDK5RAP3Q96JB5 506 aa21.27■■□□□ 1
ATG9A-215ENST00000446716 ARID3AQ99856 593 aa21.27■■□□□ 1
ATG9A-215ENST00000446716 IFT57Q9NWB7 429 aa21.27■■□□□ 1
ATG9A-215ENST00000446716 CYP46A1Q9Y6A2 500 aa21.27■□□□□ 0.99
ATG9A-215ENST00000446716 ACEP12821 1306 aa21.26■□□□□ 0.99
ATG9A-215ENST00000446716 CHRNA2Q15822 529 aa21.26■□□□□ 0.99
ATG9A-215ENST00000446716 MYD88Q99836 296 aa21.26■□□□□ 0.99
ATG9A-215ENST00000446716 RABEP1Q15276 862 aa21.26■□□□□ 0.99
ATG9A-215ENST00000446716 TMEM132AQ24JP5 1023 aa21.26■□□□□ 0.99
ATG9A-215ENST00000446716 HSP90AB3PQ58FF7 597 aa21.26■□□□□ 0.99
ATG9A-215ENST00000446716 FMNL2Q96PY5 1086 aa21.26■□□□□ 0.99
ATG9A-215ENST00000446716 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
ATG9A-215ENST00000446716 CCDC69A6NI79 296 aa21.25■□□□□ 0.99
ATG9A-215ENST00000446716 TXLNAP40222 546 aa21.25■□□□□ 0.99
ATG9A-215ENST00000446716 IFNL2Q8IZJ0 200 aa21.25■□□□□ 0.99
ATG9A-215ENST00000446716 OLFM4Q6UX06 510 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 NUP133Q8WUM0 1156 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms