RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 MKRN1Q9UHC7 482 aaKnown RBP9□□□□□ -0.97
MCF2-206ENST00000446225 ADCY10Q96PN6 1610 aa9□□□□□ -0.97
MCF2-206ENST00000446225 ARHGAP35Q9NRY4 1499 aa9□□□□□ -0.97
MCF2-206ENST00000446225 C7P10643 843 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 GCGRP47871 477 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 PTK7Q13308 1070 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
MCF2-206ENST00000446225 UHRF1BP1LA0JNW5 1464 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 KDM4FA0A1W2PPD8 638 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 RASA1P20936 1047 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 NR1H3Q13133 447 aa8.99□□□□□ -0.97
MCF2-206ENST00000446225 EFCAB5A4FU69 1503 aa8.98□□□□□ -0.97
MCF2-206ENST00000446225 CHRDL2Q6WN34 429 aa8.98□□□□□ -0.97
MCF2-206ENST00000446225 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
MCF2-206ENST00000446225 CLIP1P30622 1438 aa8.98□□□□□ -0.97
MCF2-206ENST00000446225 ANKRD62A6NC57 917 aa8.97□□□□□ -0.97
MCF2-206ENST00000446225 ERCC5P28715 1186 aaPredicted RBP8.97□□□□□ -0.97
MCF2-206ENST00000446225 CDCA7Q9BWT1 371 aaPredicted RBP8.97□□□□□ -0.97
MCF2-206ENST00000446225 TSKSQ9UJT2 592 aa8.97□□□□□ -0.97
MCF2-206ENST00000446225 ABCC2Q92887 1545 aa8.97□□□□□ -0.97
MCF2-206ENST00000446225 ABCA8O94911 1581 aa8.97□□□□□ -0.97
MCF2-206ENST00000446225 C3orf80F5H4A9 247 aa8.97□□□□□ -0.97
MCF2-206ENST00000446225 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
MCF2-206ENST00000446225 ABL1P00519 1130 aa8.96□□□□□ -0.97
MCF2-206ENST00000446225 GIMAP6Q6P9H5 292 aa8.96□□□□□ -0.97
MCF2-206ENST00000446225 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 PER1O15534 1290 aaPredicted RBP8.95□□□□□ -0.98
MCF2-206ENST00000446225 SWI5Q1ZZU3 235 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 ANKMY2Q8IV38 441 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 FAM174AQ8TBP5 190 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 KDM5BQ9UGL1 1544 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 CEP162Q5TB80 1403 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 H3BRB1 525 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 MAPK1P28482 360 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 TUT1Q9H6E5 874 aaKnown RBP8.95□□□□□ -0.98
MCF2-206ENST00000446225 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
MCF2-206ENST00000446225 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
MCF2-206ENST00000446225 ATMINO43313 823 aaPredicted RBP8.94□□□□□ -0.98
MCF2-206ENST00000446225 NCOA4Q13772 614 aa8.94□□□□□ -0.98
MCF2-206ENST00000446225 C1orf216Q8TAB5 229 aa8.94□□□□□ -0.98
MCF2-206ENST00000446225 HIRIP3Q9BW71 556 aaPredicted RBP8.94□□□□□ -0.98
MCF2-206ENST00000446225 ATP10BO94823 1461 aa8.94□□□□□ -0.98
MCF2-206ENST00000446225 ZNF211Q13398 564 aaPredicted RBP8.93□□□□□ -0.98
MCF2-206ENST00000446225 DPH6Q7L8W6 267 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 TATDN2Q93075 761 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 BACH2Q9BYV9 841 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 ASXL2Q76L83 1435 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 C19orf67A6NJJ6 358 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 ZBBXA8MT70 800 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 COL9A1P20849 921 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 C3orf67Q6ZVT6 689 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 ASB16Q96NS5 453 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 EGFL7Q9UHF1 273 aa8.93□□□□□ -0.98
MCF2-206ENST00000446225 FMN1Q68DA7 1419 aa8.92□□□□□ -0.98
MCF2-206ENST00000446225 GLYCTKQ8IVS8 523 aa8.92□□□□□ -0.98
MCF2-206ENST00000446225 KCNH8Q96L42 1107 aa8.92□□□□□ -0.98
MCF2-206ENST00000446225 ANO2Q9NQ90 1003 aa8.92□□□□□ -0.98
MCF2-206ENST00000446225 NUP153P49790 1475 aaKnown RBP8.92□□□□□ -0.98
MCF2-206ENST00000446225 RAPGEF6Q8TEU7 1601 aa8.92□□□□□ -0.98
MCF2-206ENST00000446225 MAPKBP1O60336 1514 aa8.92□□□□□ -0.98
MCF2-206ENST00000446225 DPYDQ12882 1025 aa8.92□□□□□ -0.98
MCF2-206ENST00000446225 ASTLQ6HA08 431 aaPredicted RBP8.92□□□□□ -0.98
MCF2-206ENST00000446225 DHX37Q8IY37 1157 aaKnown RBP8.92□□□□□ -0.98
MCF2-206ENST00000446225 C9orf131Q5VYM1 1079 aa8.91□□□□□ -0.98
MCF2-206ENST00000446225 ZCCHC11Q5TAX3 1644 aaKnown RBP8.9□□□□□ -0.98
MCF2-206ENST00000446225 ZSCAN29Q8IWY8 852 aaPredicted RBP8.9□□□□□ -0.98
MCF2-206ENST00000446225 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
MCF2-206ENST00000446225 ZNF594Q96JF6 807 aaPredicted RBP8.9□□□□□ -0.98
MCF2-206ENST00000446225 ABCC10Q5T3U5 1492 aa8.9□□□□□ -0.99
MCF2-206ENST00000446225 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.99
MCF2-206ENST00000446225 LZTS3O60299 673 aaPredicted RBP8.9□□□□□ -0.99
MCF2-206ENST00000446225 ICMTO60725 284 aa8.9□□□□□ -0.99
MCF2-206ENST00000446225 SEC24BO95487 1268 aa8.9□□□□□ -0.99
MCF2-206ENST00000446225 DCTN4Q9UJW0 460 aa8.9□□□□□ -0.99
MCF2-206ENST00000446225 PLEKHD1A6NEE1 506 aa8.89□□□□□ -0.99
MCF2-206ENST00000446225 SCAMP3O14828 347 aaKnown RBP8.89□□□□□ -0.99
MCF2-206ENST00000446225 PRMT3O60678 531 aa8.89□□□□□ -0.99
MCF2-206ENST00000446225 HDLBPQ00341 1268 aaKnown RBP8.89□□□□□ -0.99
MCF2-206ENST00000446225 EAPPQ56P03 285 aaPredicted RBP8.89□□□□□ -0.99
MCF2-206ENST00000446225 OGFOD1Q8N543 542 aa8.89□□□□□ -0.99
MCF2-206ENST00000446225 CASKIN1Q8WXD9 1431 aa8.88□□□□□ -0.99
MCF2-206ENST00000446225 SMAPO00193 183 aa8.88□□□□□ -0.99
MCF2-206ENST00000446225 SLC10A3P09131 477 aa8.88□□□□□ -0.99
MCF2-206ENST00000446225 SLFNL1Q499Z3 407 aa8.88□□□□□ -0.99
MCF2-206ENST00000446225 PACS2Q86VP3 889 aa8.88□□□□□ -0.99
MCF2-206ENST00000446225 PIK3R5Q8WYR1 880 aa8.88□□□□□ -0.99
MCF2-206ENST00000446225 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
MCF2-206ENST00000446225 DNAJC2Q99543 621 aaKnown RBP8.88□□□□□ -0.99
MCF2-206ENST00000446225 TANGO6Q9C0B7 1094 aa8.88□□□□□ -0.99
MCF2-206ENST00000446225 COLQQ9Y215 455 aaPredicted RBP8.88□□□□□ -0.99
MCF2-206ENST00000446225 KCNH2Q12809 1159 aa8.87□□□□□ -0.99
MCF2-206ENST00000446225 COL19A1Q14993 1142 aa8.87□□□□□ -0.99
MCF2-206ENST00000446225 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
MCF2-206ENST00000446225 WDR7Q9Y4E6 1490 aa8.87□□□□□ -0.99
MCF2-206ENST00000446225 EPRSP07814 1512 aaKnown RBP8.87□□□□□ -0.99
MCF2-206ENST00000446225 CDK13Q14004 1512 aaKnown RBP8.87□□□□□ -0.99
MCF2-206ENST00000446225 C21orf2O43822 256 aa8.86□□□□□ -0.99
MCF2-206ENST00000446225 MRPL58Q14197 206 aaKnown RBP8.86□□□□□ -0.99
MCF2-206ENST00000446225 ZNF662Q6ZS27 426 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms