RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 SCP2P22307 547 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 GTF2F1P35269 517 aaKnown RBP eCLIP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 CASP2P42575 452 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 DHX8Q14562 1220 aaKnown RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 COL19A1Q14993 1142 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 TCEAL1Q15170 157 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 ZKSCAN8Q15776 578 aaPredicted RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 NFE2L2Q16236 605 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 CDC37Q16543 378 aaPredicted RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 ZNF746Q6NUN9 644 aaPredicted RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 FMNL3Q8IVF7 1028 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 SAMD3Q8N6K7 520 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 TTC14Q96N46 770 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 MYCBPQ99417 103 aaPredicted RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 CARD10Q9BWT7 1032 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 PPP1R12CQ9BZL4 782 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 CCSER2Q9H7U1 834 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 GDPD2Q9HCC8 539 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 CASS4Q9NQ75 786 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 RBM28Q9NW13 759 aaKnown RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 CWC25Q9NXE8 425 aaPredicted RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 DDX56Q9NY93 547 aaKnown RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 MAP3K20Q9NYL2 800 aaKnown RBP3.48□□□□□ -1.85
UBBP3-201ENST00000445497 SFMBT1Q9UHJ3 866 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 PDZRN3Q9UPQ7 1066 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 TBC1D2BQ9UPU7 963 aa3.48□□□□□ -1.85
UBBP3-201ENST00000445497 SOWAHDA6NJG2 315 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 GOLGA6L6A8MZA4 724 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 NPHP1O15259 732 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 GPR37O15354 613 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 LZTS3O60299 673 aaPredicted RBP3.47□□□□□ -1.85
UBBP3-201ENST00000445497 CAND2O75155 1236 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 MS4A1P11836 297 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 PDE4AP27815 886 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 MLLT3P42568 568 aaPredicted RBP3.47□□□□□ -1.85
UBBP3-201ENST00000445497 ABL2P42684 1182 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 RAPGEF1Q13905 1077 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 HLTFQ14527 1009 aaKnown RBP eCLIP3.47□□□□□ -1.85
UBBP3-201ENST00000445497 WASHC4Q2M389 1173 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 NBPF10Q6P3W6 841 aaKnown RBP3.47□□□□□ -1.85
UBBP3-201ENST00000445497 FILIP1Q7Z7B0 1213 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 NT5DC4Q86YG4 428 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 NLGN1Q8N2Q7 840 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 SVIPQ8NHG7 77 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 OXER1Q8TDS5 423 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 JDP2Q8WYK2 163 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 DHX38Q92620 1227 aaKnown RBP3.47□□□□□ -1.85
UBBP3-201ENST00000445497 IL17RAQ96F46 866 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 DDX27Q96GQ7 796 aaKnown RBP3.47□□□□□ -1.85
UBBP3-201ENST00000445497 AGBL1Q96MI9 1066 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 OSBPL2Q9H1P3 480 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 SLKQ9H2G2 1235 aaPredicted RBP3.47□□□□□ -1.85
UBBP3-201ENST00000445497 ODF2LQ9ULJ1 636 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 PRR12Q9ULL5 1215 aa3.47□□□□□ -1.85
UBBP3-201ENST00000445497 CARNS1A5YM72 827 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 POM121CA8CG34 1229 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 IFRD1O00458 451 aaPredicted RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 ENPP3O14638 875 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 FOSP01100 380 aaPredicted RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 PRR29P0C7W0 189 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 PSEN1P49768 467 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 CALD1Q05682 793 aaKnown RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 RBL2Q08999 1139 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 CAMK2BQ13554 666 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 KCTD2Q14681 263 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 MFSD10Q14728 455 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 BRD3Q15059 726 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 CCDC92Q53HC0 331 aaPredicted RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 HSP90B2PQ58FF3 399 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 ODR4Q5SWX8 454 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 HDGFL1Q5TGJ6 251 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 FBXO33Q7Z6M2 555 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 KRT77Q7Z794 578 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 ZSCAN30Q86W11 494 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 ANKRD13BQ86YJ7 626 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 MRFAP1L1Q96HT8 127 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 ZNF512BQ96KM6 892 aaPredicted RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 PAIP2Q9BPZ3 127 aaKnown RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 TINF2Q9BSI4 451 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 RBM42Q9BTD8 480 aaKnown RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 TGIF2Q9GZN2 237 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 RETREG1Q9H6L5 497 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 SNRKQ9NRH2 765 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 IFT57Q9NWB7 429 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 RAI14Q9P0K7 980 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 BIN2Q9UBW5 565 aaPredicted RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 G3BP2Q9UN86 482 aaKnown RBP3.46□□□□□ -1.86
UBBP3-201ENST00000445497 CHMP3Q9Y3E7 222 aa3.46□□□□□ -1.86
UBBP3-201ENST00000445497 ERBB3P21860 1342 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 CCDC163A0A0D9SF12 145 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 SPDYE16A6NNV3 312 aaPredicted RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 GNPATO15228 680 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 FGAP02671 866 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 PDGFRBP09619 1106 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 XRCC5P13010 732 aaKnown RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 ATICP31939 592 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 CLCN1P35523 988 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 RFC5P40937 340 aa3.45□□□□□ -1.86
UBBP3-201ENST00000445497 TNNT2P45379 298 aaPredicted RBP3.45□□□□□ -1.86
UBBP3-201ENST00000445497 EVA1CP58658 441 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms